FFCP PHASE1:Hg19::chr5:135394840..135394872,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000503087_5end | |||
|cluster_id=chr5:135394840..135394872,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_10_at_TGFBI_5end | |||
|id=chr5:135394840..135394872,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.35e-28!180;CL:0002371!9.64e-24!591;CL:0000144!8.79e-23!625;CL:0000548!2.86e-20!679;CL:0000004!2.86e-20!679;CL:0000255!2.86e-20!679;CL:0000012!1.55e-19!682;CL:0000680!1.53e-18!57;CL:0000056!1.53e-18!57;CL:0000355!1.53e-18!57;CL:0000187!1.18e-16!54;CL:0000048!4.78e-16!430;CL:0000723!1.50e-15!436;CL:0000192!2.69e-15!42;CL:0000514!2.69e-15!42;CL:0000183!5.24e-15!59;CL:0000057!8.41e-15!75;CL:0000034!2.95e-14!444;CL:0000393!2.92e-13!60;CL:0000211!2.92e-13!60;CL:0000359!3.23e-13!32;CL:0000003!2.36e-11!722;CL:0002334!2.83e-08!12;CL:0000222!7.86e-08!119;CL:0002620!3.46e-07!23;CL:0002320!3.61e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.04e-16;32!CL:0000192;2.76e-12;43!CL:0002334;4.69e-11;12!CL:0000187;3.47e-10;55!CL:0002620;3.26e-08;23!CL:0002539;4.43e-08;10!CL:0000393;5.00e-08;61!CL:0000211;5.00e-08;61!CL:0000134;8.67e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.33e-23,427;CL:0000723,2.85e-22,433;CL:0000034,7.06e-21,441;CL:0000680,2.77e-20,58;CL:0000056,2.77e-20,58;CL:0000355,2.77e-20,58;CL:0000187,7.73e-18,55;CL:0000359,1.14e-16,32;CL:0000192,2.10e-16,43;CL:0000514,2.10e-16,43;CL:0000393,1.18e-14,61;CL:0000211,1.18e-14,61;CL:0000057,3.31e-14,76;CL:0002334,5.94e-11,12;CL:0000134,4.97e-10,354;CL:0002320,7.47e-10,361;CL:0002620,3.43e-08,23;CL:0002539,4.45e-08,10;CL:0000219,4.75e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000514;2.76e-12;43!CL:0000355;2.57e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.69e-18!167;UBERON:0001134!1.29e-16!61;UBERON:0002036!1.29e-16!61;UBERON:0003082!1.29e-16!61;UBERON:0002385!2.05e-16!63;UBERON:0001015!2.05e-16!63;UBERON:0000383!2.05e-16!63;UBERON:0000486!6.37e-15!82;UBERON:0004290!1.90e-14!70;UBERON:0000914!2.26e-14!83;UBERON:0002329!2.26e-14!83;UBERON:0003077!2.26e-14!83;UBERON:0003059!2.26e-14!83;UBERON:0007282!2.26e-14!83;UBERON:0009618!2.26e-14!83;UBERON:0007285!2.26e-14!83;UBERON:0001637!3.03e-11!42;UBERON:0003509!3.03e-11!42;UBERON:0004572!3.03e-11!42;UBERON:0005256!4.13e-10!143;UBERON:0000926!8.10e-10!448;UBERON:0004120!8.10e-10!448;UBERON:0006603!8.10e-10!448;UBERON:0004573!1.07e-09!33;UBERON:0004571!1.07e-09!33;UBERON:0000490!1.80e-09!138;UBERON:0000468!2.71e-09!659;UBERON:0000467!7.33e-08!625;UBERON:0000480!1.04e-07!626;UBERON:0002100!1.05e-07!216;UBERON:0003081!1.17e-07!216;UBERON:0002384!2.61e-07!375;UBERON:0001135!6.87e-07!15;UBERON:0004872!7.03e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.43e-11;33!UBERON:0004571;1.43e-11;33!UBERON:0002385;4.36e-10;31!UBERON:0001015;4.36e-10;31!UBERON:0000383;4.36e-10;31!UBERON:0001637;1.94e-09;42!UBERON:0003509;1.94e-09;42!UBERON:0004572;1.94e-09;42!UBERON:0004237;4.43e-08;10!UBERON:0004695;4.43e-08;10!UBERON:0002111;4.43e-08;10!UBERON:0004178;4.43e-08;10!UBERON:0001135;8.90e-08;15!UBERON:0004457;6.64e-07;9!UBERON:0000042;6.64e-07;9!UBERON:0001013;8.14e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.52e-19,62;UBERON:0002036,7.52e-19,62;UBERON:0003082,7.52e-19,62;UBERON:0002385,9.44e-18,64;UBERON:0001015,9.44e-18,64;UBERON:0000383,9.44e-18,64;UBERON:0002204,2.60e-17,167;UBERON:0000486,1.84e-16,83;UBERON:0002329,2.63e-15,71;UBERON:0003059,2.63e-15,71;UBERON:0007282,2.63e-15,71;UBERON:0004290,2.63e-15,71;UBERON:0009618,2.63e-15,71;UBERON:0003077,7.11e-15,72;UBERON:0007285,7.11e-15,72;UBERON:0007524,1.86e-14,73;UBERON:0000926,5.25e-14,315;UBERON:0004120,5.25e-14,315;UBERON:0006603,5.25e-14,315;UBERON:0001637,6.77e-14,42;UBERON:0003509,6.77e-14,42;UBERON:0004572,6.77e-14,42;UBERON:0004573,7.45e-13,33;UBERON:0004571,7.45e-13,33;UBERON:0007503,1.49e-12,78;UBERON:0002384,5.58e-10,371;UBERON:0005256,1.02e-08,122;UBERON:0004237,4.45e-08,10;UBERON:0004695,4.45e-08,10;UBERON:0002111,4.45e-08,10;UBERON:0004178,4.45e-08,10;UBERON:0001135,7.58e-08,15;UBERON:0004872,8.87e-08,83;UBERON:0000490,9.18e-08,148;UBERON:0003104,1.08e-07,160;UBERON:0009142,1.08e-07,160;UBERON:0002049,3.46e-07,78;UBERON:0007798,3.46e-07,78;UBERON:0003081,3.52e-07,203;UBERON:0007500,5.13e-07,59;UBERON:0001981,5.13e-07,59;UBERON:0004537,5.13e-07,59;UBERON:0006965,5.13e-07,59;UBERON:0001013,6.17e-07,14 | |||
|phase1_expression=4.36028110249336,15.6293382440418,3.80576891059122,3.00219895059391,11.6209884551095,8.72338524100369,5.06599756336621,1.89515962028049,0,1.96587149201207,0.697801167972428,3.9319446983431,3.4289707169699,0.866364470720326,0.662794751455832,15.4634783683908,9.04041792035965,8.76372108464848,10.7345215733912,4.92484232307152,3.26401105990805,2.5076377718247,0.85870796139317,1.23186982565596,0.753255837568817,0,0,0,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0,0.802177789880567,0.651032612147555,0,0,0.257575567634187,1.01778767145695,0.377875943688809,1.21292030593908,0.929716147622738,1.23350366406548,2.16794459626573,1.43846196161075,1.0246428261164,3.07426898855161,0.689491361473237,0,1.35426486594342,3.38836211176688,3.27487380069415,3.59557575112135,1.83650335422542,1.28371610830437,0,2.30895910130701,2.99195486432448,1.27867425159808,1.45104619314292,0,0.622822248995575,1.25624332628372,2.60741459210101,1.95469960234605,0,0.368277635987565,0.949387162322653,1.69004229049553,1.27562579979026,1.46761051855863,1.12328631146495,1.20141514273205,0.32145117339416,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.383587685530591,2.1686349143074,14.0374614978049,19.699126578672,18.2915767821753,22.3852040339212,1.51255707462509,8.64744650103999,2.89854792787316,0,0.728590576585084,2.22470665670658,2.92092654289215,1.0447784237956,4.78648657867915,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0.838998872419812,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,3.24056779152704,0,0,0,0,0,0.366403487860815,0,0,0,7.9515512271251,4.05217637326655,0.926864265692532,11.7603014507014,2.4826786753885,2.24271040056923,13.8773694448616,16.0333906471154,0,0.538842688278752,0.490385709340376,1.05950199351452,0.576175924479999,0.468642863667593,2.49728061464256,0,0.597794722207204,0.587172493218824,0,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,1.97813543422845,0.910161361938026,2.87447256726495,0,0.125118519871964,0,0.877955241761676,1.5324389789951,2.85452311922534,1.02088964844019,10.5839885056429,6.83383644219416,6.35795703478686,16.8051013807265,3.29768093563004,12.3667459221902,4.65292140828975,15.3586462339552,9.64626351095866,10.6022185182528,3.86609574297657,3.23292113637624,33.3709016965617,8.06016785821122,3.39121184620975,0.773043412653187,1.09098448236334,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0,0.441175890929576,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,3.43135620597051,0.658501712451753,0,0.201057944823262,0.185176890317059,0,0,10.1031939417691,0.463721619900307,0.587043471179108,0.144366447761074,0,0,0,0,1.96973604869918,0.234004265139238,2.0808362720422,1.87467667973554,7.0552493843521,0.283550194484773,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0.87192013766656,0.51336800074665,1.68053230485111,3.57656445851882,5.917119267892,0.26593811658487,1.04007436911366,0,1.41849132023278,1.0656887160644,3.57444984145369,5.42621605391443,4.11620168390384,4.23457039581856,3.909311436168,3.95975936466715,0.602878754119172,0.871533458600294,0.899756920638513,1.2162378064119,1.00451418286425,4.21667878966063,2.39624855491583,1.14861935834114,0,9.41078493339265,13.3559609657749,14.5039380224315,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.10422342547226,2.50085260529839,0.271265023699736,3.74347550755453,7.85087550707512,0,0.468565659970853,0.601892199455438,2.27407504055985,2.0694614258501,0.664225598535437,3.31864503375066,0.781952530212746,0.587403472388222,0.343143423810856,0,0.862856803274467,0.320182673410333,1.81876542867756,0,5.74541557326393,9.42809669711352,7.21271274453894,30.591950293205,12.8139149255701,3.58195074346692,14.9594146663555,8.90508398669946,5.39733928309294,5.85953693533319,1.06765302817952,6.75030757938707,4.06736324609857,0.241718899183244,5.21316822788541,0.0920809889358963,3.78887678943202,2.54927635209404,7.99858931252487,0,0.0770153371044148,1.56869953835371,1.46139224653261,1.26661954671451,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0,0,1.14853107599234,1.30012049207304,1.6068392984416,0.773365746336976,2.61882649094895,4.60511024178389,1.65403886981437,4.40423003959922,4.0604674295984,1.87498580315422,1.06838442776085,1.65284915360978,1.92190067365106,1.02090169995667,0.910420027699949,3.253918845081,9.75918275174984,1.3940745403212,1.54016790088044,2.12922412126809,2.60979897622522,5.37440235401368,2.43312307461385,0.744316738719335,1.2655176988749,1.14378116354295,0.255897791311334,0,4.13664222303718,5.49464048139461,1.43897966066652,7.96157386234559,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| |||
|short_description=p10@TGFBI | |||
}} |
Latest revision as of 19:49, 24 September 2015
Short description: | p10@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -2bp_to_ENST00000503087_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.33e-23 | 427 |
somatic stem cell | 2.85e-22 | 433 |
stem cell | 7.06e-21 | 441 |
muscle precursor cell | 2.77e-20 | 58 |
myoblast | 2.77e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-20 | 58 |
muscle cell | 7.73e-18 | 55 |
vascular associated smooth muscle cell | 1.14e-16 | 32 |
smooth muscle cell | 2.10e-16 | 43 |
smooth muscle myoblast | 2.10e-16 | 43 |
electrically responsive cell | 1.18e-14 | 61 |
electrically active cell | 1.18e-14 | 61 |
fibroblast | 3.31e-14 | 76 |
preadipocyte | 5.94e-11 | 12 |
mesenchymal cell | 4.97e-10 | 354 |
connective tissue cell | 7.47e-10 | 361 |
skin fibroblast | 3.43e-08 | 23 |
aortic smooth muscle cell | 4.45e-08 | 10 |
motile cell | 4.75e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.68e-07 | 14 |