FFCP PHASE1:Hg19::chr3:132036369..132036382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55 | |EntrezGene=55 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=125 | |HGNC=125 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_ENST00000489084_5end | |association_with_transcript=88bp_to_ENST00000489084_5end | ||
|cluster_id=chr3:132036369..132036382,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_5_at_ACPP_5end | |description=CAGE_peak_5_at_ACPP_5end | ||
|id=chr3:132036369..132036382,+ | |id=chr3:132036369..132036382,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.04e-39!65;CL:0000766!2.75e-39!76;CL:0002194!4.35e-38!63;CL:0000576!4.35e-38!63;CL:0000040!4.35e-38!63;CL:0000559!4.35e-38!63;CL:0000763!5.70e-37!112;CL:0000049!5.70e-37!112;CL:0000557!1.48e-34!71;CL:0002057!1.82e-34!42;CL:0000839!3.13e-32!70;CL:0000860!4.43e-31!45;CL:0000738!1.73e-27!140;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002032!8.62e-26!165;CL:0000837!8.62e-26!165;CL:0000988!3.22e-24!182;CL:0002087!3.16e-23!119;CL:0002031!1.93e-19!124;CL:0002393!3.40e-11!9;CL:0002397!3.40e-11!9 | |ontology_enrichment_celltype=CL:0002009!1.04e-39!65;CL:0000766!2.75e-39!76;CL:0002194!4.35e-38!63;CL:0000576!4.35e-38!63;CL:0000040!4.35e-38!63;CL:0000559!4.35e-38!63;CL:0000763!5.70e-37!112;CL:0000049!5.70e-37!112;CL:0000557!1.48e-34!71;CL:0002057!1.82e-34!42;CL:0000839!3.13e-32!70;CL:0000860!4.43e-31!45;CL:0000738!1.73e-27!140;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002032!8.62e-26!165;CL:0000837!8.62e-26!165;CL:0000988!3.22e-24!182;CL:0002087!3.16e-23!119;CL:0002031!1.93e-19!124;CL:0002393!3.40e-11!9;CL:0002397!3.40e-11!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.96e-24;48!CL:0000766;5.17e-20;69!CL:0000473;8.70e-17;39!CL:0000234;8.70e-17;39!CL:0000860;3.03e-14;33!CL:0002057;3.03e-14;33!CL:0000763;5.13e-12;100!CL:0002393;9.38e-12;6!CL:0002397;9.38e-12;6!CL:0000875;6.23e-10;3!CL:0002396;6.23e-10;3!CL:0000094;2.52e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.61e-41,72;CL:0002194,8.26e-38,59;CL:0000576,8.26e-38,59;CL:0000040,8.26e-38,59;CL:0000559,8.26e-38,59;CL:0002009,2.73e-36,61;CL:0000763,1.52e-34,108;CL:0000049,1.52e-34,108;CL:0000473,4.04e-34,48;CL:0000234,4.04e-34,48;CL:0000839,6.79e-33,66;CL:0000557,2.82e-32,67;CL:0000860,2.87e-31,42;CL:0002057,2.87e-31,42;CL:0000037,2.62e-24,168;CL:0000738,1.12e-23,136;CL:0000988,1.92e-22,177;CL:0002032,5.71e-22,161;CL:0000837,5.71e-22,161;CL:0002087,1.48e-20,115;CL:0002393,4.97e-20,9;CL:0002397,4.97e-20,9;CL:0002031,1.04e-16,120;CL:0000875,6.04e-10,3;CL:0002396,6.04e-10,3;CL:0000094,2.33e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.55e-21;42!CL:0000049;4.91e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.05e-35!102;UBERON:0003061!3.05e-35!102;UBERON:0002193!4.57e-32!112;UBERON:0007023!4.50e-30!115;UBERON:0002371!2.53e-28!80;UBERON:0001474!5.21e-26!86;UBERON:0004765!2.34e-20!101;UBERON:0001434!2.34e-20!101;UBERON:0002780!7.41e-19!41;UBERON:0001890!7.41e-19!41;UBERON:0006240!7.41e-19!41;UBERON:0002405!3.17e-18!115;UBERON:0003080!3.83e-18!42;UBERON:0001049!1.26e-17!57;UBERON:0005068!1.26e-17!57;UBERON:0006241!1.26e-17!57;UBERON:0007135!1.26e-17!57;UBERON:0001893!9.42e-17!34;UBERON:0002791!2.47e-16!33;UBERON:0002020!1.52e-15!34;UBERON:0003528!1.52e-15!34;UBERON:0001869!3.02e-15!32;UBERON:0002616!2.20e-14!59;UBERON:0002619!4.56e-12!22;UBERON:0000955!4.57e-11!69;UBERON:0006238!4.57e-11!69;UBERON:0001950!1.19e-10!20;UBERON:0001017!2.27e-10!82;UBERON:0000956!5.76e-10!25;UBERON:0000203!5.76e-10!25;UBERON:0003081!8.03e-10!216;UBERON:0002420!1.09e-09!9;UBERON:0007245!1.09e-09!9;UBERON:0010009!1.09e-09!9;UBERON:0010011!1.09e-09!9;UBERON:0000454!1.09e-09!9;UBERON:0003075!1.55e-09!86;UBERON:0007284!1.55e-09!86;UBERON:0005743!2.43e-09!86;UBERON:0003056!2.79e-09!61;UBERON:0002346!4.32e-09!90;UBERON:0000073!4.82e-08!94;UBERON:0001016!4.82e-08!94;UBERON:0009663!6.50e-08!7;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0002204!3.51e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!3.05e-35!102;UBERON:0003061!3.05e-35!102;UBERON:0002193!4.57e-32!112;UBERON:0007023!4.50e-30!115;UBERON:0002371!2.53e-28!80;UBERON:0001474!5.21e-26!86;UBERON:0004765!2.34e-20!101;UBERON:0001434!2.34e-20!101;UBERON:0002780!7.41e-19!41;UBERON:0001890!7.41e-19!41;UBERON:0006240!7.41e-19!41;UBERON:0002405!3.17e-18!115;UBERON:0003080!3.83e-18!42;UBERON:0001049!1.26e-17!57;UBERON:0005068!1.26e-17!57;UBERON:0006241!1.26e-17!57;UBERON:0007135!1.26e-17!57;UBERON:0001893!9.42e-17!34;UBERON:0002791!2.47e-16!33;UBERON:0002020!1.52e-15!34;UBERON:0003528!1.52e-15!34;UBERON:0001869!3.02e-15!32;UBERON:0002616!2.20e-14!59;UBERON:0002619!4.56e-12!22;UBERON:0000955!4.57e-11!69;UBERON:0006238!4.57e-11!69;UBERON:0001950!1.19e-10!20;UBERON:0001017!2.27e-10!82;UBERON:0000956!5.76e-10!25;UBERON:0000203!5.76e-10!25;UBERON:0003081!8.03e-10!216;UBERON:0002420!1.09e-09!9;UBERON:0007245!1.09e-09!9;UBERON:0010009!1.09e-09!9;UBERON:0010011!1.09e-09!9;UBERON:0000454!1.09e-09!9;UBERON:0003075!1.55e-09!86;UBERON:0007284!1.55e-09!86;UBERON:0005743!2.43e-09!86;UBERON:0003056!2.79e-09!61;UBERON:0002346!4.32e-09!90;UBERON:0000073!4.82e-08!94;UBERON:0001016!4.82e-08!94;UBERON:0009663!6.50e-08!7;UBERON:0000178!1.59e-07!15;UBERON:0000179!1.59e-07!15;UBERON:0000463!1.59e-07!15;UBERON:0002308!1.89e-07!9;UBERON:0000125!1.89e-07!9;UBERON:0002204!3.51e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.86e-10;15!UBERON:0000179;2.86e-10;15!UBERON:0000463;2.86e-10;15!UBERON:0002420;8.01e-10;9!UBERON:0007245;8.01e-10;9!UBERON:0010009;8.01e-10;9!UBERON:0010011;8.01e-10;9!UBERON:0000454;8.01e-10;9!UBERON:0009663;3.82e-09;7!UBERON:0005383;1.20e-08;3!UBERON:0005382;1.20e-08;3!UBERON:0000125;4.97e-07;9!UBERON:0002308;4.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.96e-33,98;UBERON:0003061,3.96e-33,98;UBERON:0002193,8.27e-31,108;UBERON:0002371,1.95e-27,76;UBERON:0001474,8.41e-25,82;UBERON:0002405,2.04e-22,93;UBERON:0004765,7.76e-22,90;UBERON:0001434,2.29e-20,100;UBERON:0003081,1.94e-11,203;UBERON:0007023,2.31e-10,114;UBERON:0000178,3.89e-10,15;UBERON:0000179,3.89e-10,15;UBERON:0000463,3.89e-10,15;UBERON:0002420,4.77e-10,9;UBERON:0007245,4.77e-10,9;UBERON:0010009,4.77e-10,9;UBERON:0010011,4.77e-10,9;UBERON:0000454,4.77e-10,9;UBERON:0009663,3.28e-09,7;UBERON:0002204,7.61e-09,167;UBERON:0005383,1.18e-08,3;UBERON:0005382,1.18e-08,3;UBERON:0000125,4.44e-07,9;UBERON:0002308,4.44e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,1.53531759238885,0.464448369948228,0,0,0,0.154934401160603,0,0,1.66198622559563,1.80490002723128,0.651032612147555,3.35873211359887,0.971680998056939,2.57575567634187,0.872389432677388,0,0.242584061187816,1.39457422143411,2.05583944010913,0.309706370895104,0.28769239232215,0.768482119587302,0.945928919554341,1.03423704220986,1.93645405075148,4.06279459783025,0.752969358170419,0.818718450173537,0.898893937780338,0.612167784741805,0.641858054152187,1.27867425159808,1.64925650093358,0.997318288108159,1.70489900213078,0.580418477257168,0.56738522469114,1.24564449799115,1.25624332628372,1.5644487552606,2.6062661364614,0,0.736555271975129,1.26584954976354,8.23895616616573,6.16552469898626,5.03180749220102,2.3589012540764,2.70318407114711,5.30394436100364,5.41524213108372,7.75775041076451,6.57590953552682,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0.649094787309367,0.522389211897802,0.531831842075461,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0.781952530212746,0,0,1.24060815673732,3.01999881146064,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,3.55213326462519,0.764637207142375,2.27858874869665,1.19115887728894,1.23408681925858,3.24236655596359,1.62009431171434,0.79312517629427,0,0,0,0.557409525377156,0,2.27653898714925,0,0,0.191505370132367,0,0.649243880549111,0,0.228234679033192,0.313359791546046,0,0,1.76646882614069,1.61439765752838,4.25846237690326,1.03051603426729,1.84344458585075,1.3420566473545,1.50164227540718,1.17232857241224,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,1.9882952955326,0.844016498463076,0,0.329607748453519,0,0,0,0.251932747854276,0,0.861593638227486,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0,0,0.583209226766509,0,4.42870692906919,1.08536794762867,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,1.07841812769083,0,0.468528891450678,0,0,0,0.394584402849391,0,0.61214552326098,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,1.20084057741958,1.9166753044879,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0.899895566206002,0.77380195455795,0.485996453264197,0,0.236417121897595,0.314727528809989,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.653174720218818,0,0.082092520749339,0,0,0,0,0,0.79339561045614,0,0,2.13574825135389,2.35806457649499,2.07119527673598,1.48849806543585,0.395223263795889,1.70509637733254,0,0,0,0,0,0,0,1.58634144372552,0.3755727921195,0,0.665574309221114,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0.398594520940089,0.163565394255844,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.770750701157514,1.41696576325585,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,3.55246420390072,1.42769420259154,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0.354809480650555,0,0,0.475788130837822,0.263091094251396,0,0,1.41287567130925,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.588925401344836,1.18818560130834,0,0,0.375935671919414,0.322289439867886,0.299823467774787,0,0,0,0,0.917458566809082,0.860037498908708,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,3.31667775783512,0.62059797517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| ||
|short_description=p5@ACPP | |short_description=p5@ACPP | ||
}} | }} |
Latest revision as of 20:19, 24 September 2015
Short description: | p5@ACPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACPP_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 88bp_to_ENST00000489084_5end |
EntrezGene: | ACPP |
HGNC: | 125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.61e-41 | 72 |
monopoietic cell | 8.26e-38 | 59 |
monocyte | 8.26e-38 | 59 |
monoblast | 8.26e-38 | 59 |
promonocyte | 8.26e-38 | 59 |
macrophage dendritic cell progenitor | 2.73e-36 | 61 |
myeloid cell | 1.52e-34 | 108 |
common myeloid progenitor | 1.52e-34 | 108 |
defensive cell | 4.04e-34 | 48 |
phagocyte | 4.04e-34 | 48 |
myeloid lineage restricted progenitor cell | 6.79e-33 | 66 |
granulocyte monocyte progenitor cell | 2.82e-32 | 67 |
classical monocyte | 2.87e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-31 | 42 |
hematopoietic stem cell | 2.62e-24 | 168 |
leukocyte | 1.12e-23 | 136 |
hematopoietic cell | 1.92e-22 | 177 |
hematopoietic oligopotent progenitor cell | 5.71e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.71e-22 | 161 |
nongranular leukocyte | 1.48e-20 | 115 |
intermediate monocyte | 4.97e-20 | 9 |
CD14-positive, CD16-positive monocyte | 4.97e-20 | 9 |
hematopoietic lineage restricted progenitor cell | 1.04e-16 | 120 |
non-classical monocyte | 6.04e-10 | 3 |
CD14-low, CD16-positive monocyte | 6.04e-10 | 3 |
granulocyte | 2.33e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.96e-33 | 98 |
blood island | 3.96e-33 | 98 |
hemolymphoid system | 8.27e-31 | 108 |
bone marrow | 1.95e-27 | 76 |
bone element | 8.41e-25 | 82 |
immune system | 2.04e-22 | 93 |
skeletal element | 7.76e-22 | 90 |
skeletal system | 2.29e-20 | 100 |
lateral plate mesoderm | 1.94e-11 | 203 |
adult organism | 2.31e-10 | 114 |
blood | 3.89e-10 | 15 |
haemolymphatic fluid | 3.89e-10 | 15 |
organism substance | 3.89e-10 | 15 |
basal ganglion | 4.77e-10 | 9 |
nuclear complex of neuraxis | 4.77e-10 | 9 |
aggregate regional part of brain | 4.77e-10 | 9 |
collection of basal ganglia | 4.77e-10 | 9 |
cerebral subcortex | 4.77e-10 | 9 |
telencephalic nucleus | 3.28e-09 | 7 |
musculoskeletal system | 7.61e-09 | 167 |
caudate-putamen | 1.18e-08 | 3 |
dorsal striatum | 1.18e-08 | 3 |
neural nucleus | 4.44e-07 | 9 |
nucleus of brain | 4.44e-07 | 9 |