FFCP PHASE1:Hg19::chr4:1166623..1166634,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000512888_5end | |association_with_transcript=0bp_to_ENST00000512888_5end | ||
|cluster_id=chr4:1166623..1166634,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_3_at_SPON2_5end | |description=CAGE_peak_3_at_SPON2_5end | ||
|id=chr4:1166623..1166634,- | |id=chr4:1166623..1166634,- | ||
|ontology_enrichment_celltype=CL:0000057!1.04e-14!75;CL:0000055!1.77e-14!180;CL:0000048!1.21e-08!430;CL:0000723!3.14e-08!436;CL:0000034!7.43e-08!444;CL:0002334!2.44e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.04e-14!75;CL:0000055!1.77e-14!180;CL:0000048!1.21e-08!430;CL:0000723!3.14e-08!436;CL:0000034!7.43e-08!444;CL:0002334!2.44e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.24e-11;55!CL:0000723;2.23e-11;61!CL:0000048;3.61e-11;58!CL:0002334;1.92e-09;12!CL:0000034;9.79e-09;69!CL:0002570;4.85e-08;8!CL:0002320;8.72e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.65e-17,427;CL:0000723,3.91e-16,433;CL:0000057,2.11e-15,76;CL:0000034,5.93e-15,441;CL:0002320,9.70e-12,361;CL:0000134,1.80e-10,354;CL:0000219,1.47e-09,386;CL:0002334,1.73e-09,12;CL:0002570,5.26e-08,8;CL:0000136,1.21e-07,15;CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58;CL:0000187,7.48e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.11e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.19e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.48e-11!143;UBERON:0000914!1.59e-10!83;UBERON:0002329!1.59e-10!83;UBERON:0003077!1.59e-10!83;UBERON:0003059!1.59e-10!83;UBERON:0007282!1.59e-10!83;UBERON:0009618!1.59e-10!83;UBERON:0007285!1.59e-10!83;UBERON:0003102!5.47e-09!95;UBERON:0000479!9.42e-09!787;UBERON:0002100!2.44e-08!216;UBERON:0000475!2.79e-08!365;UBERON:0000481!3.79e-08!347;UBERON:0004290!6.25e-08!70;UBERON:0003104!9.17e-08!238;UBERON:0009142!9.17e-08!238;UBERON:0000468!7.09e-07!659 | |ontology_enrichment_uberon=UBERON:0005256!3.48e-11!143;UBERON:0000914!1.59e-10!83;UBERON:0002329!1.59e-10!83;UBERON:0003077!1.59e-10!83;UBERON:0003059!1.59e-10!83;UBERON:0007282!1.59e-10!83;UBERON:0009618!1.59e-10!83;UBERON:0007285!1.59e-10!83;UBERON:0003102!5.47e-09!95;UBERON:0000479!9.42e-09!787;UBERON:0002100!2.44e-08!216;UBERON:0000475!2.79e-08!365;UBERON:0000481!3.79e-08!347;UBERON:0004290!6.25e-08!70;UBERON:0003104!9.17e-08!238;UBERON:0009142!9.17e-08!238;UBERON:0000468!7.09e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.92e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.66e-16,160;UBERON:0009142,5.66e-16,160;UBERON:0005256,1.73e-14,122;UBERON:0002329,6.36e-12,71;UBERON:0003059,6.36e-12,71;UBERON:0007282,6.36e-12,71;UBERON:0004290,6.36e-12,71;UBERON:0009618,6.36e-12,71;UBERON:0007524,7.56e-12,73;UBERON:0003077,1.45e-11,72;UBERON:0007285,1.45e-11,72;UBERON:0007503,2.95e-11,78;UBERON:0002384,3.70e-11,371;UBERON:0002100,5.51e-10,199;UBERON:0000486,1.75e-09,83;UBERON:0003102,1.31e-08,99;UBERON:0001013,1.79e-08,14;UBERON:0001134,3.44e-08,62;UBERON:0002036,3.44e-08,62;UBERON:0003082,3.44e-08,62;UBERON:0002385,4.23e-08,64;UBERON:0001015,4.23e-08,64;UBERON:0000383,4.23e-08,64;UBERON:0000479,1.72e-07,773;UBERON:0004923,2.58e-07,66;UBERON:0000490,3.26e-07,148 | |||
|phase1_expression=20.5296568575729,16.6998408634967,12.4039875604455,7.00513088471913,9.83314407740033,0,25.3299878168311,8.84407822797563,6.26845507679612,2.7030733015166,0.697801167972428,0,0.527533956456907,17.5748221203266,5.63375538737457,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,3.14691421479123,4.60595277716655,3.8704030829019,0,0,0,0,0,0,1.10799081706375,2.20598892217156,1.08505435357926,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0.451725357233318,0.127986611154418,2.49861453104692,0.947109008176067,0,2.82249440514625,3.4767225451856,0.434473211648397,2.43806866313962,2.01210257911091,2.17366355134002,0.361439152384566,1.00267582127178,1.44846518960824,0,0.973269740605272,0.283604451492204,0.221729397462564,0.263504357079378,2.03017567021455,0.364295288292542,0,0,0,0,4.29283123749616,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,1.72101972449288,0.709336764396714,0,0,0,2.48968828319813,0.269421344139376,0.326923806226917,1.05950199351452,3.45705554687999,1.17160715916898,11.5499228427219,1.1409436430889,5.97794722207204,3.17073146338165,1.94247533241758,3.08991774744947,2.24569588380383,4.05353247128834,4.85631171526098,29.7000714320513,23.7376252107415,2.73048408581408,65.3942509052777,2.69337782326506,2.12701483782339,0.554128230968366,1.31693286264251,4.90380473278431,10.5166641234618,0.567160915800105,0.538168907066586,1.49490172172997,1.69545520927649,4.20127534518163,1.95799805553034,0.515281080091258,1.67505170698431,0.675105328965065,0,0,1.10459878370759,1.2931684545505,1.06502877754984,0.503760491138201,0.847802961552438,1.73934767846967,0.272746120590835,0,0.243947412259191,0.132529768321485,0.464775771478074,0.207322110030741,0,0,1.56449532329816,16.0810234548221,9.66944449467364,3.71494342425583,25.9876613401051,0.828147600278907,1.51726221070292,1.20505514941741,1.54411561825352,0.871517776369625,0.237270619111097,0.808987848960987,0.784885860501384,0.769494313892781,0,7.01208869017229,9.4662022606222,16.1709582524096,7.60530208930985,5.89696330006576,2.36315962672562,0,0,0.171567810298526,0.878002283269004,0,0,0.277765335475589,5.86454949558584,7.27954349695705,0,0.231860809950154,0,0,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,2.98440103173194,10.6956759156318,2.34434894420094,5.13217338068116,2.15937734676979,11.1126931402249,2.00078502841405,0.224262168690721,0.43596006883328,0.51336800074665,17.1931381957844,100.143804838527,10.143633030672,27.6575641248265,15.6011155367049,0,0,1.3321108950805,8.721657613147,89.5325648895881,35.3993344815731,6.84045987016844,12.0833262572466,31.6780749173372,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,3.32997005335432,1.02738161275192,1.07436577943937,0,8.47232268868287,9.48761329381876,12.5776175554153,2.28685161800217,0,0.773288812777695,1.50764638800914,0.637938751653163,0,0,0,5.03035116048474,2.00068208423871,0.271265023699736,0.415941723061614,0.178428988797162,0.630809660135739,0,0.300946099727719,2.27407504055985,2.0694614258501,0,0,12.4243568689358,2.34961388955289,0,1.6541442089831,5.1771408196468,5.01619521676188,0.303127571446259,4.99306318531491,0.30239029332968,12.4053903909388,4.75732117192994,16.8396056659844,16.6580894032411,17.9097537173346,21.5544254332434,0,10.7946785661859,18.111295981939,10.758657437809,22.3279404548957,7.90230573527723,0,0,0,17.4517961210202,27.8599487050277,48.7782823649058,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,5.96082162596476,15.0506932156456,0,0,1.11937377361089,0,0,0.512900250232778,0.328014645699706,0,1.13345112812495,0,0,1.14853107599234,1.30012049207304,0,1.16004861950546,2.31072925671967,1.38153307253517,3.30807773962873,19.7653250557623,8.99103502268217,4.51701125305335,4.62966585363034,0.165284915360978,0,0,0,0,0.31481234683064,0.6970372701606,0,0,1.73986598415015,0,0,4.46590043231601,2.53103539774981,29.9289404460405,22.263107844086,19.6851934495603,0,0,31.8374249922467,38.1606471333116,38.2890307623481,0,0,0,46.8128389526007,0,0,1.22849920267187,48.5020631601235,1.13008116620243,0.551365343546124,0,0,23.1510213706675,32.138842850285,0,1.54911749049875,0.281695602532241,18.9302984909348,17.1935821772962,0,10.9975929861885,4.01104507065562,0.329294892959902,12.9020879080343,38.1428845067031,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0.507447609232169,0,1.13929437434833,2.85878130549347,0.411362273086194,0.648473311192717,1.08006287447623,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,4.53614521001611,2.37571744666111,5.52889263778618,0,0.281338832821026,0,0,0,0.398495976502139,1.10513566212459,0,0.102268682502155,0,0.933118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| ||
|short_description=p3@SPON2 | |short_description=p3@SPON2 | ||
}} | }} |
Latest revision as of 20:30, 24 September 2015
Short description: | p3@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 0bp_to_ENST00000512888_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.65e-17 | 427 |
somatic stem cell | 3.91e-16 | 433 |
fibroblast | 2.11e-15 | 76 |
stem cell | 5.93e-15 | 441 |
connective tissue cell | 9.70e-12 | 361 |
mesenchymal cell | 1.80e-10 | 354 |
motile cell | 1.47e-09 | 386 |
preadipocyte | 1.73e-09 | 12 |
mesenchymal stem cell of adipose | 5.26e-08 | 8 |
fat cell | 1.21e-07 | 15 |
muscle precursor cell | 1.30e-07 | 58 |
myoblast | 1.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.30e-07 | 58 |
muscle cell | 7.48e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.66e-16 | 160 |
entire embryonic mesenchyme | 5.66e-16 | 160 |
trunk mesenchyme | 1.73e-14 | 122 |
somite | 6.36e-12 | 71 |
presomitic mesoderm | 6.36e-12 | 71 |
presumptive segmental plate | 6.36e-12 | 71 |
dermomyotome | 6.36e-12 | 71 |
trunk paraxial mesoderm | 6.36e-12 | 71 |
dense mesenchyme tissue | 7.56e-12 | 73 |
paraxial mesoderm | 1.45e-11 | 72 |
presumptive paraxial mesoderm | 1.45e-11 | 72 |
epithelial vesicle | 2.95e-11 | 78 |
connective tissue | 3.70e-11 | 371 |
trunk | 5.51e-10 | 199 |
multilaminar epithelium | 1.75e-09 | 83 |
surface structure | 1.31e-08 | 99 |
adipose tissue | 1.79e-08 | 14 |
skeletal muscle tissue | 3.44e-08 | 62 |
striated muscle tissue | 3.44e-08 | 62 |
myotome | 3.44e-08 | 62 |
muscle tissue | 4.23e-08 | 64 |
musculature | 4.23e-08 | 64 |
musculature of body | 4.23e-08 | 64 |
tissue | 1.72e-07 | 773 |
organ component layer | 2.58e-07 | 66 |
unilaminar epithelium | 3.26e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.19e-08 | 14 |