FFCP PHASE1:Hg19::chr8:101965124..101965140,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:101965124..101965140,-
|short_description=p7@YWHAZ
|description=CAGE_peak_7_at_YWHAZ_5end
|association_with_transcript=-13bp_to_ENST00000437293_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7534 | |EntrezGene=7534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12855 | |HGNC=12855 | ||
|TSSclassifier=strong | |||
|UniProt=E9PD24 | |UniProt=E9PD24 | ||
|association_with_transcript=-13bp_to_ENST00000437293_5end | |||
|cluster_id=chr8:101965124..101965140,- | |||
|coexpression_cluster_id=C4713 | |||
|description=CAGE_peak_7_at_YWHAZ_5end | |||
|id=chr8:101965124..101965140,- | |||
|ontology_enrichment_celltype=CL:0000221!6.13e-10!71;CL:0000133!8.97e-10!59;CL:0002319!1.08e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.24e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.95e-10,72;CL:0000133,7.85e-10,59;CL:0002319,1.05e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.67e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!5.29e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.78e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.30e-15!173;UBERON:0006601!1.30e-15!173;UBERON:0004121!1.59e-15!169;UBERON:0005743!7.26e-15!86;UBERON:0000073!1.17e-14!94;UBERON:0001016!1.17e-14!94;UBERON:0001017!3.11e-14!82;UBERON:0000033!1.33e-12!123;UBERON:0001869!1.91e-12!32;UBERON:0001893!1.04e-11!34;UBERON:0000956!1.35e-11!25;UBERON:0000203!1.35e-11!25;UBERON:0000153!1.80e-11!129;UBERON:0007811!1.80e-11!129;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0002791!3.50e-11!33;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0003056!5.23e-10!61;UBERON:0002619!9.24e-10!22;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0001950!4.67e-09!20;UBERON:0003080!6.37e-09!42;UBERON:0002346!3.77e-08!90;UBERON:0003075!4.14e-08!86;UBERON:0007284!4.14e-08!86;UBERON:0000475!2.07e-07!365;UBERON:0002616!6.92e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.65e-12;32!UBERON:0000956;9.74e-12;25!UBERON:0000203;9.74e-12;25!UBERON:0001893;4.07e-11;34!UBERON:0002791;8.70e-11;32!UBERON:0003528;5.13e-10;34!UBERON:0002020;5.13e-10;34!UBERON:0002619;6.93e-10;22!UBERON:0001950;4.15e-09;20!UBERON:0002780;2.02e-07;41!UBERON:0001890;2.02e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.79e-15,171;UBERON:0000924,1.79e-15,171;UBERON:0006601,1.79e-15,171;UBERON:0001017,6.59e-15,81;UBERON:0001016,1.20e-14,89;UBERON:0001869,1.86e-12,32;UBERON:0000955,7.80e-12,68;UBERON:0006238,7.80e-12,68;UBERON:0001893,1.02e-11,34;UBERON:0000956,1.32e-11,25;UBERON:0000203,1.32e-11,25;UBERON:0002791,3.30e-11,32;UBERON:0003528,2.51e-10,34;UBERON:0002020,2.51e-10,34;UBERON:0003056,4.12e-10,61;UBERON:0002619,9.05e-10,22;UBERON:0002780,1.18e-09,41;UBERON:0001890,1.18e-09,41;UBERON:0003080,1.18e-09,41;UBERON:0006240,1.18e-09,41;UBERON:0001950,4.59e-09,20;UBERON:0010371,2.38e-08,104;UBERON:0010314,1.58e-07,132;UBERON:0002346,3.27e-07,86;UBERON:0003075,3.67e-07,82;UBERON:0007284,3.67e-07,82;UBERON:0000073,7.37e-07,53;UBERON:0002616,7.37e-07,53 | |||
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| ||
|short_description=p7@YWHAZ | |||
}} | }} |
Latest revision as of 20:54, 24 September 2015
Short description: | p7@YWHAZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_YWHAZ_5end |
Coexpression cluster: | C4713_Neural_Macrophage_Neurons_Mast_medulloblastoma_brain_duodenum |
Association with transcript: | -13bp_to_ENST00000437293_5end |
EntrezGene: | YWHAZ |
HGNC: | 12855 |
UniProt: | E9PD24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.95e-10 | 72 |
neurectodermal cell | 7.85e-10 | 59 |
neural cell | 1.05e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.79e-15 | 171 |
ectoderm | 1.79e-15 | 171 |
presumptive ectoderm | 1.79e-15 | 171 |
central nervous system | 6.59e-15 | 81 |
nervous system | 1.20e-14 | 89 |
cerebral hemisphere | 1.86e-12 | 32 |
brain | 7.80e-12 | 68 |
future brain | 7.80e-12 | 68 |
telencephalon | 1.02e-11 | 34 |
cerebral cortex | 1.32e-11 | 25 |
pallium | 1.32e-11 | 25 |
regional part of telencephalon | 3.30e-11 | 32 |
brain grey matter | 2.51e-10 | 34 |
gray matter | 2.51e-10 | 34 |
pre-chordal neural plate | 4.12e-10 | 61 |
regional part of cerebral cortex | 9.05e-10 | 22 |
regional part of forebrain | 1.18e-09 | 41 |
forebrain | 1.18e-09 | 41 |
anterior neural tube | 1.18e-09 | 41 |
future forebrain | 1.18e-09 | 41 |
neocortex | 4.59e-09 | 20 |
ecto-epithelium | 2.38e-08 | 104 |
structure with developmental contribution from neural crest | 1.58e-07 | 132 |
neurectoderm | 3.27e-07 | 86 |
neural plate | 3.67e-07 | 82 |
presumptive neural plate | 3.67e-07 | 82 |
regional part of nervous system | 7.37e-07 | 53 |
regional part of brain | 7.37e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.78e-07 | 239 |