FFCP PHASE1:Hg19::chr1:209941378..209941390,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80342 | |EntrezGene=80342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |HGNC=30766 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJU2 | |UniProt=B1AJU2 | ||
|association_with_transcript=-442bp_to_ENST00000367023_5end | |association_with_transcript=-442bp_to_ENST00000367023_5end | ||
|cluster_id=chr1:209941378..209941390,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_TRAF3IP3_5end | |description=CAGE_peak_8_at_TRAF3IP3_5end | ||
|id=chr1:209941378..209941390,+ | |id=chr1:209941378..209941390,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.22e-76!42;CL:0000860!1.46e-70!45;CL:0000766!3.91e-70!76;CL:0000738!3.65e-60!140;CL:0000839!4.07e-57!70;CL:0000557!4.26e-56!71;CL:0002194!5.13e-55!63;CL:0000576!5.13e-55!63;CL:0000040!5.13e-55!63;CL:0000559!5.13e-55!63;CL:0000037!2.67e-54!172;CL:0000566!2.67e-54!172;CL:0002009!6.94e-53!65;CL:0002032!2.59e-52!165;CL:0000837!2.59e-52!165;CL:0002031!1.88e-51!124;CL:0002087!4.36e-51!119;CL:0000763!8.77e-51!112;CL:0000049!8.77e-51!112;CL:0000988!4.49e-50!182;CL:0002393!4.59e-16!9;CL:0002397!4.59e-16!9;CL:0000134!6.06e-16!358;CL:0002320!3.17e-15!365;CL:0000219!1.03e-12!390;CL:0000094!7.71e-12!8;CL:0000048!2.78e-10!430;CL:0000723!7.40e-10!436;CL:0000034!8.25e-10!444;CL:0000081!3.10e-08!11;CL:0000084!2.67e-07!25;CL:0000827!2.67e-07!25;CL:0000625!4.44e-07!11 | |ontology_enrichment_celltype=CL:0002057!1.22e-76!42;CL:0000860!1.46e-70!45;CL:0000766!3.91e-70!76;CL:0000738!3.65e-60!140;CL:0000839!4.07e-57!70;CL:0000557!4.26e-56!71;CL:0002194!5.13e-55!63;CL:0000576!5.13e-55!63;CL:0000040!5.13e-55!63;CL:0000559!5.13e-55!63;CL:0000037!2.67e-54!172;CL:0000566!2.67e-54!172;CL:0002009!6.94e-53!65;CL:0002032!2.59e-52!165;CL:0000837!2.59e-52!165;CL:0002031!1.88e-51!124;CL:0002087!4.36e-51!119;CL:0000763!8.77e-51!112;CL:0000049!8.77e-51!112;CL:0000988!4.49e-50!182;CL:0002393!4.59e-16!9;CL:0002397!4.59e-16!9;CL:0000134!6.06e-16!358;CL:0002320!3.17e-15!365;CL:0000219!1.03e-12!390;CL:0000094!7.71e-12!8;CL:0000048!2.78e-10!430;CL:0000723!7.40e-10!436;CL:0000034!8.25e-10!444;CL:0000081!3.10e-08!11;CL:0000084!2.67e-07!25;CL:0000827!2.67e-07!25;CL:0000625!4.44e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-96;33!CL:0002057;1.57e-96;33!CL:0000473;2.80e-67;39!CL:0000234;2.80e-67;39!CL:0000576;2.69e-58;48!CL:0000766;5.13e-41;69!CL:0000763;3.30e-19;100!CL:0002087;5.15e-16;104!CL:0000738;2.53e-12;136!CL:0000771;2.70e-11;2!CL:0000094;2.35e-10;8!CL:0000775;1.16e-07;3!CL:0000081;1.56e-07;11!CL:0002393;2.51e-07;6!CL:0002397;2.51e-07;6!CL:0000988;3.11e-07;177!CL:0000219;5.10e-07;193!CL:0000875;5.90e-07;3!CL:0002396;5.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-115,42;CL:0002057,1.39e-115,42;CL:0000473,2.90e-100,48;CL:0000234,2.90e-100,48;CL:0000766,5.10e-82,72;CL:0002194,8.26e-79,59;CL:0000576,8.26e-79,59;CL:0000040,8.26e-79,59;CL:0000559,8.26e-79,59;CL:0002009,4.85e-76,61;CL:0000839,7.70e-70,66;CL:0000557,1.04e-68,67;CL:0000763,1.82e-52,108;CL:0000049,1.82e-52,108;CL:0000738,1.14e-42,136;CL:0002087,6.85e-40,115;CL:0002031,1.68e-35,120;CL:0000037,3.55e-35,168;CL:0000988,5.24e-33,177;CL:0002032,7.92e-33,161;CL:0000837,7.92e-33,161;CL:0000134,1.27e-12,354;CL:0002393,2.50e-12,9;CL:0002397,2.50e-12,9;CL:0002320,3.17e-12,361;CL:0000771,2.70e-11,2;CL:0000219,8.06e-11,386;CL:0000094,2.33e-10,8;CL:0000048,4.23e-09,427;CL:0000723,7.31e-09,433;CL:0000034,1.48e-08,441;CL:0000775,1.15e-07,3;CL:0000081,1.55e-07,11;CL:0000875,5.38e-07,3;CL:0002396,5.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-83;42!CL:0000049;1.20e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.61e-57!102;UBERON:0003061!9.61e-57!102;UBERON:0002193!9.63e-52!112;UBERON:0002371!2.21e-50!80;UBERON:0001474!8.95e-46!86;UBERON:0002405!7.10e-39!115;UBERON:0004765!1.17e-36!101;UBERON:0001434!1.17e-36!101;UBERON:0003081!2.35e-17!216;UBERON:0002204!3.90e-17!167;UBERON:0002384!3.01e-14!375 | |ontology_enrichment_uberon=UBERON:0002390!9.61e-57!102;UBERON:0003061!9.61e-57!102;UBERON:0002193!9.63e-52!112;UBERON:0002371!2.21e-50!80;UBERON:0001474!8.95e-46!86;UBERON:0002405!7.10e-39!115;UBERON:0004765!1.17e-36!101;UBERON:0001434!1.17e-36!101;UBERON:0003081!2.35e-17!216;UBERON:0002204!3.90e-17!167;UBERON:0002384!3.01e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-63,76;UBERON:0001474,1.38e-58,82;UBERON:0002390,1.46e-57,98;UBERON:0003061,1.46e-57,98;UBERON:0004765,8.36e-53,90;UBERON:0002193,1.35e-51,108;UBERON:0002405,6.88e-51,93;UBERON:0001434,7.32e-47,100;UBERON:0002204,2.82e-25,167;UBERON:0003081,4.83e-24,203;UBERON:0000926,8.50e-13,315;UBERON:0004120,8.50e-13,315;UBERON:0006603,8.50e-13,315;UBERON:0002384,1.11e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,1.17440175733939,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.515151135268373,1.16318591023652,1.88937971844405,0.485168122375632,2.55671940596253,1.6446715520873,6.81354015969228,2.58923153089935,1.2808035326455,5.43909128743746,17.9267753983042,9.03678557017357,9.47985406160392,2.07066573496865,0.545812300115692,4.94391665779186,10.7129362329816,6.73950956859797,14.0654167675789,1.31940520074686,1.39624560335142,2.13112375266347,1.7412554317715,1.70215567407342,1.86846674698672,3.01498398308092,2.60741459210101,4.56096573880745,3.02699751316684,1.10483290796269,3.16462387440884,1.05627643155971,1.4882300997553,1.25795187305026,0.898629049171961,0.750884464207532,0.803627933485401,1.71007646244749,1.19350006319454,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.501559486172034,0,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0.579606171470105,1.03800594213442,1.33770414044857,0,0.226618685395132,0,0.34362744548263,0,0.95569624297229,0,0.950452044448374,0.903450714466637,0.895906278080929,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,8.23907726341901,0,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0.5745161103971,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,1.17440175733939,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0,0.515151135268373,1.16318591023652,1.88937971844405,0.485168122375632,2.55671940596253,1.6446715520873,6.81354015969228,2.58923153089935,1.2808035326455,5.43909128743746,17.9267753983042,9.03678557017357,9.47985406160392,2.07066573496865,0.545812300115692,4.94391665779186,10.7129362329816,6.73950956859797,14.0654167675789,1.31940520074686,1.39624560335142,2.13112375266347,1.7412554317715,1.70215567407342,1.86846674698672,3.01498398308092,2.60741459210101,4.56096573880745,3.02699751316684,1.10483290796269,3.16462387440884,1.05627643155971,1.4882300997553,1.25795187305026,0.898629049171961,0.750884464207532,0.803627933485401,1.71007646244749,1.19350006319454,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.501559486172034,0,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0.579606171470105,1.03800594213442,1.33770414044857,0,0.226618685395132,0,0.34362744548263,0,0.95569624297229,0,0.950452044448374,0.903450714466637,0.895906278080929,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,8.23907726341901,0,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0.5745161103971,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@TRAF3IP3 | |short_description=p8@TRAF3IP3 | ||
}} | }} |
Latest revision as of 20:56, 24 September 2015
Short description: | p8@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRAF3IP3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -442bp_to_ENST00000367023_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | B1AJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-63 | 76 |
bone element | 1.38e-58 | 82 |
hematopoietic system | 1.46e-57 | 98 |
blood island | 1.46e-57 | 98 |
skeletal element | 8.36e-53 | 90 |
hemolymphoid system | 1.35e-51 | 108 |
immune system | 6.88e-51 | 93 |
skeletal system | 7.32e-47 | 100 |
musculoskeletal system | 2.82e-25 | 167 |
lateral plate mesoderm | 4.83e-24 | 203 |
mesoderm | 8.50e-13 | 315 |
mesoderm-derived structure | 8.50e-13 | 315 |
presumptive mesoderm | 8.50e-13 | 315 |
connective tissue | 1.11e-11 | 371 |