FFCP PHASE1:Hg19::chr1:209979449..209979460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3664 | |EntrezGene=3664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6121 | |HGNC=6121 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWX8 | |UniProt=F5GWX8 | ||
|association_with_transcript=4bp_to_ENST00000542854_5end | |association_with_transcript=4bp_to_ENST00000542854_5end | ||
|cluster_id=chr1:209979449..209979460,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_3_at_IRF6_5end | |description=CAGE_peak_3_at_IRF6_5end | ||
|id=chr1:209979449..209979460,- | |id=chr1:209979449..209979460,- | ||
|ontology_enrichment_celltype=CL:0000066!7.57e-25!254;CL:0002076!1.99e-24!43;CL:0000223!9.31e-17!59;CL:0002251!3.21e-13!21;CL:0002368!1.03e-12!13;CL:0002159!1.29e-10!13;CL:0002202!1.54e-08!9;CL:0002632!1.54e-08!9;CL:0002077!5.00e-07!33 | |ontology_enrichment_celltype=CL:0000066!7.57e-25!254;CL:0002076!1.99e-24!43;CL:0000223!9.31e-17!59;CL:0002251!3.21e-13!21;CL:0002368!1.03e-12!13;CL:0002159!1.29e-10!13;CL:0002202!1.54e-08!9;CL:0002632!1.54e-08!9;CL:0002077!5.00e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.30e-21;42!CL:0002368;1.23e-17;13!CL:0002251;5.50e-16;20!CL:0002202;1.00e-11;9!CL:0002632;1.00e-11;9!CL:0002159;1.71e-11;14!CL:0000244;1.09e-08;4!CL:0000731;1.09e-08;4!CL:0002327;1.42e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.40e-29,42;CL:0000066,4.78e-23,253;CL:0000223,3.79e-20,58;CL:0002368,1.57e-17,13;CL:0002251,5.49e-16,20;CL:0002202,1.24e-11,9;CL:0002632,1.24e-11,9;CL:0002159,1.55e-11,14;CL:0000244,1.09e-08,4;CL:0000731,1.09e-08,4;CL:0002327,1.42e-07,4;CL:0000076,8.85e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;9.14e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!1.13e-14!14;DOID:305!1.07e-11!106;DOID:0050687!6.53e-07!143 | |ontology_enrichment_disease=DOID:1749!1.13e-14!14;DOID:305!1.07e-11!106;DOID:0050687!6.53e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.80e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.52e-18,14;DOID:305,2.12e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.41e-24!169;UBERON:0000925!1.41e-24!169;UBERON:0006595!1.41e-24!169;UBERON:0001007!3.06e-18!155;UBERON:0001555!3.06e-18!155;UBERON:0007026!3.06e-18!155;UBERON:0001004!7.80e-16!72;UBERON:0004921!6.56e-15!129;UBERON:0004185!6.56e-15!129;UBERON:0000161!2.28e-13!35;UBERON:0000464!6.28e-13!104;UBERON:0000077!1.05e-12!130;UBERON:0000166!7.56e-11!21;UBERON:0005911!1.50e-10!82;UBERON:0005153!1.55e-10!37;UBERON:0000466!2.10e-10!126;UBERON:0000065!5.15e-10!53;UBERON:0005178!2.77e-09!34;UBERON:0002224!2.77e-09!34;UBERON:0005181!7.69e-09!35;UBERON:0000344!1.35e-08!12;UBERON:0001041!3.01e-08!98;UBERON:0000165!3.41e-08!28;UBERON:0000930!3.41e-08!28;UBERON:0000062!6.37e-08!511;UBERON:0005156!1.04e-07!59;UBERON:0000990!1.04e-07!59;UBERON:0005157!1.31e-07!51;UBERON:0000365!1.64e-07!5;UBERON:0005631!1.83e-07!14;UBERON:0000158!1.83e-07!14;UBERON:0007196!2.98e-07!14;UBERON:0001558!2.98e-07!14;UBERON:0001008!3.32e-07!45;UBERON:0003102!3.54e-07!95;UBERON:0003729!6.67e-07!5;UBERON:0006554!8.51e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.74e-12;33!UBERON:0001555;3.77e-11;54!UBERON:0000161;3.09e-10;19!UBERON:0000166;3.09e-10;19!UBERON:0000344;5.00e-10;20!UBERON:0000365;5.21e-10;5!UBERON:0000165;6.46e-10;28!UBERON:0005911;1.34e-09;36!UBERON:0000974;2.21e-09;6!UBERON:0000486;2.55e-09;12!UBERON:0004807;2.31e-08;22!UBERON:0005910;3.23e-08;6!UBERON:0003729;6.19e-08;13!UBERON:0007196;6.44e-08;15!UBERON:0001558;6.44e-08;15!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0001041;1.15e-07;14!UBERON:0001911;1.42e-07;4!UBERON:0003343;2.17e-07;4!UBERON:0004785;2.17e-07;4!UBERON:0005409;2.51e-07;22!UBERON:0005181;3.71e-07;35!UBERON:0005631;4.74e-07;10!UBERON:0000158;4.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.40e-23,160;UBERON:0000925,5.40e-23,160;UBERON:0006595,5.40e-23,160;UBERON:0001007,6.97e-17,145;UBERON:0001555,6.97e-17,145;UBERON:0007026,6.97e-17,145;UBERON:0001004,6.95e-15,74;UBERON:0004921,1.34e-12,118;UBERON:0000166,1.50e-11,22;UBERON:0000161,2.20e-11,36;UBERON:0000344,4.79e-10,20;UBERON:0000365,5.78e-10,5;UBERON:0000065,6.73e-10,54;UBERON:0000165,2.24e-09,29;UBERON:0000930,2.24e-09,29;UBERON:0003102,1.26e-08,99;UBERON:0005178,1.48e-08,34;UBERON:0002224,1.48e-08,34;UBERON:0005153,2.09e-08,37;UBERON:0005181,3.40e-08,35;UBERON:0005910,3.52e-08,6;UBERON:0003729,5.67e-08,13;UBERON:0000153,6.35e-08,62;UBERON:0007811,6.35e-08,62;UBERON:0005911,7.20e-08,82;UBERON:0007196,7.47e-08,15;UBERON:0001558,7.47e-08,15;UBERON:0005157,8.56e-08,47;UBERON:0001911,1.42e-07,4;UBERON:0005333,1.42e-07,4;UBERON:0008425,1.42e-07,4;UBERON:0005311,1.42e-07,4;UBERON:0001041,1.70e-07,87;UBERON:0003343,2.09e-07,4;UBERON:0004785,2.09e-07,4;UBERON:0000974,5.14e-07,10;UBERON:0004807,5.39e-07,28;UBERON:0000033,7.47e-07,56 | |||
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| ||
|short_description=p3@IRF6 | |short_description=p3@IRF6 | ||
}} | }} |
Latest revision as of 21:09, 24 September 2015
Short description: | p3@IRF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF6_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 4bp_to_ENST00000542854_5end |
EntrezGene: | IRF6 |
HGNC: | 6121 |
UniProt: | F5GWX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.40e-29 | 42 |
epithelial cell | 4.78e-23 | 253 |
endodermal cell | 3.79e-20 | 58 |
respiratory epithelial cell | 1.57e-17 | 13 |
epithelial cell of alimentary canal | 5.49e-16 | 20 |
epithelial cell of tracheobronchial tree | 1.24e-11 | 9 |
epithelial cell of lower respiratory tract | 1.24e-11 | 9 |
general ecto-epithelial cell | 1.55e-11 | 14 |
transitional epithelial cell | 1.09e-08 | 4 |
urothelial cell | 1.09e-08 | 4 |
mammary gland epithelial cell | 1.42e-07 | 4 |
squamous epithelial cell | 8.85e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.52e-18 | 14 |
carcinoma | 2.12e-08 | 106 |