FFCP PHASE1:Hg19::chr14:62162224..62162254,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |||
|TSSclassifier=strong | |||
|UniProt=F8W9L0,B4E2U7 | |||
|association_with_transcript=0bp_to_ENST00000394988,ENST00000539494,ENST00000553999,ENST00000557446_5end | |||
|cluster_id=chr14:62162224..62162254,+ | |||
|coexpression_cluster_id=C3441 | |||
|description=CAGE_peak_1_at_HIF1A_5end | |||
|id=chr14:62162224..62162254,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.53e-23!682;CL:0000548!3.97e-23!679;CL:0000004!3.97e-23!679;CL:0000255!3.97e-23!679;CL:0000048!6.16e-22!430;CL:0002371!1.98e-21!591;CL:0000723!8.24e-21!436;CL:0000144!1.46e-20!625;CL:0000034!2.33e-20!444;CL:0002057!7.78e-19!42;CL:0000860!5.50e-18!45;CL:0000003!9.05e-18!722;CL:0000766!3.26e-17!76;CL:0002320!2.90e-14!365;CL:0000055!9.05e-14!180;CL:0002194!1.34e-13!63;CL:0000576!1.34e-13!63;CL:0000040!1.34e-13!63;CL:0000559!1.34e-13!63;CL:0000134!1.68e-13!358;CL:0000557!1.83e-13!71;CL:0002009!2.76e-13!65;CL:0000839!3.13e-12!70;CL:0000057!8.91e-12!75;CL:0000063!4.04e-11!578;CL:0000219!2.56e-10!390;CL:0000680!3.33e-08!57;CL:0000056!3.33e-08!57;CL:0000355!3.33e-08!57;CL:0000187!3.59e-07!54;CL:0002620!9.25e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.01e-17;33!CL:0002057;4.01e-17;33!CL:0000473;4.33e-14;39!CL:0000234;4.33e-14;39!CL:0000576;5.22e-10;48!CL:0000766;5.62e-09;69!CL:0002620;9.40e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.94e-22,427;CL:0000723,2.70e-21,433;CL:0000034,7.82e-21,441;CL:0000860,7.78e-19,42;CL:0002057,7.78e-19,42;CL:0000473,1.33e-18,48;CL:0000234,1.33e-18,48;CL:0000766,1.87e-17,72;CL:0002320,1.69e-14,361;CL:0002194,8.01e-14,59;CL:0000576,8.01e-14,59;CL:0000040,8.01e-14,59;CL:0000559,8.01e-14,59;CL:0000134,9.88e-14,354;CL:0000557,1.27e-13,67;CL:0002009,1.76e-13,61;CL:0000839,2.36e-12,66;CL:0000057,6.34e-12,76;CL:0000219,1.70e-10,386;CL:0000680,2.15e-08,58;CL:0000056,2.15e-08,58;CL:0000355,2.15e-08,58;CL:0000187,2.34e-07,55;CL:0002620,9.25e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;5.05e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.37e-19!167;UBERON:0002384!9.35e-15!375;UBERON:0002371!1.73e-13!80;UBERON:0004765!3.30e-13!101;UBERON:0001434!3.30e-13!101;UBERON:0000926!3.73e-13!448;UBERON:0004120!3.73e-13!448;UBERON:0006603!3.73e-13!448;UBERON:0001474!2.97e-12!86;UBERON:0003081!5.93e-11!216;UBERON:0002390!1.42e-10!102;UBERON:0003061!1.42e-10!102;UBERON:0002193!5.44e-10!112;UBERON:0002405!7.92e-10!115;UBERON:0000914!6.07e-08!83;UBERON:0002329!6.07e-08!83;UBERON:0003077!6.07e-08!83;UBERON:0003059!6.07e-08!83;UBERON:0007282!6.07e-08!83;UBERON:0009618!6.07e-08!83;UBERON:0007285!6.07e-08!83;UBERON:0000468!4.02e-07!659;UBERON:0000467!8.09e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.34e-20,167;UBERON:0000926,1.02e-16,315;UBERON:0004120,1.02e-16,315;UBERON:0006603,1.02e-16,315;UBERON:0002384,5.47e-15,371;UBERON:0004765,3.66e-14,90;UBERON:0001434,4.14e-14,100;UBERON:0002371,1.36e-13,76;UBERON:0001474,2.68e-12,82;UBERON:0002405,6.30e-11,93;UBERON:0003081,6.51e-11,203;UBERON:0002390,1.54e-10,98;UBERON:0003061,1.54e-10,98;UBERON:0002193,6.24e-10,108;UBERON:0002329,6.79e-07,71;UBERON:0003059,6.79e-07,71;UBERON:0007282,6.79e-07,71;UBERON:0004290,6.79e-07,71;UBERON:0009618,6.79e-07,71 | |||
|phase1_expression=548.30534863854,331.641711507133,727.747588347499,313.229423845298,383.93958011304,469.318125965998,324.223844055438,280.483623801513,92.9820836391425,135.890866885334,76.758128476967,226.742144271119,169.602167000896,497.788271605308,472.572657788008,271.619359166517,287.485289867437,232.238608743185,269.82683773115,78.7974771691443,70.176237788023,49.2123912720598,104.476135302836,126.882592042564,137.092562437525,91.4668466802977,81.3616841448962,83.2760066298726,226.18445918812,401.485550409684,346.168851734746,138.832604896318,104.819659734831,112.035465080537,72.431832542582,113.735385989937,76.3361142270603,877.528727114494,1040.22404902762,764.963319273378,153.158184380108,186.238857960913,211.211965460033,294.140637051059,358.60427056068,297.65064307745,597.807482921421,559.188327709683,576.673262606683,841.787939934612,634.253909366053,814.917764196065,951.842824513804,774.581620300591,758.388324928314,662.424792850426,500.509879206089,552.145601281573,875.399932180781,881.592037378029,776.794607845835,648.817507467271,537.754020947919,588.616380485651,1047.94556068782,841.999673441651,773.545233252504,821.58313538955,675.320379354161,799.689326204239,775.516762873345,991.035118442537,879.132512310777,184.637120236637,169.02041847221,224.963726630487,330.583161464135,341.802608107268,540.359422475583,119.705352371324,112.189005940287,128.778228404067,87.9981222306614,65.5366333514558,83.6138698631741,79.3718213973703,75.2744455627703,91.9603903927173,90.5631475715261,85.8648379081828,395.603013531067,465.091853981784,392.59460528461,200.900419440119,402.445148220743,57.1543463961917,238.805660918193,184.322047729358,137.958605828671,40.2919453891534,101.035902656413,91.3754265068035,134.430442601459,58.2676689509458,54.20748697537,44.9713806004751,57.1396152544183,47.7780622576768,52.1537983715112,48.6736197626881,51.6774533259536,69.2629374906775,159.408055399215,192.896937052683,166.211482849913,56.8812900341782,105.76885623413,83.8450966977617,129.040042929946,46.191985076994,37.1117568698159,41.8198899557285,56.1645194160092,50.4267247948408,38.7285252312272,52.3277727017277,44.3409118337365,149.592203472751,132.382896912836,147.431243152689,641.212058405719,762.586877483034,597.629614056661,252.284528364427,269.719795922109,283.899177163214,295.051086355958,404.39357722149,454.050726839018,409.977655908281,520.069766088999,65.3585586733586,40.0724817121796,45.6064864624848,109.372471661628,110.224123710436,105.568620651979,106.843799688793,122.978905817727,108.465590388233,45.3178288796088,73.1199405840206,42.6982816977341,42.3980956443007,51.5984306538184,80.0593502045596,61.0265302287487,225.856247513993,317.699272579232,342.419186858258,75.7319116165196,130.766802183584,75.1711137248362,144.491590575926,51.8490846644326,189.136824505681,178.949909983057,150.336326445235,56.7271558623768,105.368488212062,78.4103464022143,2478.78965197235,2838.55153356574,94.1963152627874,492.499204130061,295.049092178471,730.633859727341,577.97579080886,228.406438135742,330.239106483819,153.718553850775,122.100436466494,943.591859332091,515.133609994487,459.327947748819,142.578696841525,381.428462005759,152.308930691968,214.766132859261,112.953420665801,223.575226105494,190.713625797474,260.77731337706,233.429240739137,367.069199916298,136.960263802621,448.227238740471,342.144822897231,241.57978990515,138.34452701458,82.6410863088674,125.242068781825,209.698639305412,460.480559934712,369.619156781666,193.087311353382,437.04251335929,358.445698785666,522.382619125966,453.382336461819,619.900810891718,353.80740228351,438.797669497273,544.65210165646,306.534462378128,423.291041261096,370.747804638361,745.941802891358,395.078164972749,181.205229693888,559.850127398701,335.403734999814,258.410342681183,174.321289553294,254.199384390658,201.910435153859,82.6981727558657,112.915362609905,87.8426208093559,94.2278990089717,104.208511411635,164.969766302275,275.351176900476,362.787889140787,87.0250004520627,373.351814137711,270.704805626095,213.543774071918,270.747012265431,236.190809285812,217.058538337351,243.153459607125,226.356170631986,213.30312950938,229.579114196655,215.458407889979,66.4339909162183,96.7668239243776,93.4273005722278,97.0257495144577,27.8861076608028,231.94722313592,91.5724355356176,51.2097195320995,112.657409705492,616.100006782005,150.138390439,39.3406136401668,68.0581143226741,186.010186323486,69.3971690310992,113.352891595474,432.99402607582,409.466190371971,688.367174304622,91.2395949849987,74.0776820122577,132.79739825975,73.4890090102126,88.4240746957719,153.393194792449,103.663889456682,196.639027707987,196.841051372232,206.785999812796,202.59661395937,306.290147643741,229.019543549002,55.2071057997904,2139.63644218208,153.556468919066,146.788305802867,147.146472438718,116.016796318843,93.7863898695337,45.456622641435,39.853932051416,83.8254985511256,79.5884793523724,113.529675865001,76.601483944995,203.405787002484,170.460386913813,402.847204014478,215.754493599731,1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064794 | |||
|short_description=p1@HIF1A | |||
}} |
Latest revision as of 23:18, 24 September 2015
Short description: | p1@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIF1A_5end |
Coexpression cluster: | C3441_Eosinophils_Mast_Neutrophils_Preadipocyte_CD14_Fibroblast_Smooth |
Association with transcript: | 0bp_to_ENST00000394988, ENST00000539494, ENST00000553999, ENST00000557446_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | F8W9L0B4E2U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.94e-22 | 427 |
somatic stem cell | 2.70e-21 | 433 |
stem cell | 7.82e-21 | 441 |
classical monocyte | 7.78e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.78e-19 | 42 |
defensive cell | 1.33e-18 | 48 |
phagocyte | 1.33e-18 | 48 |
myeloid leukocyte | 1.87e-17 | 72 |
connective tissue cell | 1.69e-14 | 361 |
monopoietic cell | 8.01e-14 | 59 |
monocyte | 8.01e-14 | 59 |
monoblast | 8.01e-14 | 59 |
promonocyte | 8.01e-14 | 59 |
mesenchymal cell | 9.88e-14 | 354 |
granulocyte monocyte progenitor cell | 1.27e-13 | 67 |
macrophage dendritic cell progenitor | 1.76e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.36e-12 | 66 |
fibroblast | 6.34e-12 | 76 |
motile cell | 1.70e-10 | 386 |
muscle precursor cell | 2.15e-08 | 58 |
myoblast | 2.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.15e-08 | 58 |
muscle cell | 2.34e-07 | 55 |
skin fibroblast | 9.25e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.34e-20 | 167 |
mesoderm | 1.02e-16 | 315 |
mesoderm-derived structure | 1.02e-16 | 315 |
presumptive mesoderm | 1.02e-16 | 315 |
connective tissue | 5.47e-15 | 371 |
skeletal element | 3.66e-14 | 90 |
skeletal system | 4.14e-14 | 100 |
bone marrow | 1.36e-13 | 76 |
bone element | 2.68e-12 | 82 |
immune system | 6.30e-11 | 93 |
lateral plate mesoderm | 6.51e-11 | 203 |
hematopoietic system | 1.54e-10 | 98 |
blood island | 1.54e-10 | 98 |
hemolymphoid system | 6.24e-10 | 108 |
somite | 6.79e-07 | 71 |
presomitic mesoderm | 6.79e-07 | 71 |
presumptive segmental plate | 6.79e-07 | 71 |
dermomyotome | 6.79e-07 | 71 |
trunk paraxial mesoderm | 6.79e-07 | 71 |