FFCP PHASE1:Hg19::chr14:62193465..62193490,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=326bp_to_ENST00000556237_5end | |||
|cluster_id=chr14:62193465..62193490,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_7_at_HIF1A_5end | |||
|id=chr14:62193465..62193490,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-15!42;CL:0000860!4.03e-15!45;CL:0000766!3.51e-13!76;CL:0000048!5.78e-12!430;CL:0002194!3.91e-11!63;CL:0000576!3.91e-11!63;CL:0000040!3.91e-11!63;CL:0000559!3.91e-11!63;CL:0000548!5.30e-11!679;CL:0000004!5.30e-11!679;CL:0000255!5.30e-11!679;CL:0000723!7.97e-11!436;CL:0000012!8.32e-11!682;CL:0000034!1.26e-10!444;CL:0000557!2.56e-10!71;CL:0002009!3.03e-10!65;CL:0000839!8.42e-10!70;CL:0000144!3.75e-09!625;CL:0002320!1.18e-08!365;CL:0002371!2.07e-08!591;CL:0000134!4.56e-08!358;CL:0000003!7.39e-08!722;CL:0000063!8.46e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.65e-20;33!CL:0002057;8.65e-20;33!CL:0000473;4.41e-15;39!CL:0000234;4.41e-15;39!CL:0000576;7.09e-11;48!CL:0000766;1.30e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-20,42;CL:0002057,1.35e-20,42;CL:0000473,1.75e-19,48;CL:0000234,1.75e-19,48;CL:0000048,8.44e-18,427;CL:0000766,2.39e-17,72;CL:0000723,6.48e-17,433;CL:0000034,2.64e-16,441;CL:0002194,5.60e-15,59;CL:0000576,5.60e-15,59;CL:0000040,5.60e-15,59;CL:0000559,5.60e-15,59;CL:0002009,4.53e-14,61;CL:0002320,1.10e-13,361;CL:0000557,1.51e-13,67;CL:0000839,3.74e-13,66;CL:0000134,1.03e-12,354;CL:0000219,8.80e-10,386;CL:0000763,2.05e-07,108;CL:0000049,2.05e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.34e-11!167;UBERON:0002371!5.62e-10!80;UBERON:0004765!6.53e-09!101;UBERON:0001434!6.53e-09!101;UBERON:0002384!6.69e-09!375;UBERON:0001474!1.00e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.51e-15,167;UBERON:0002384,3.99e-14,371;UBERON:0002371,1.13e-13,76;UBERON:0004765,1.20e-13,90;UBERON:0001474,1.79e-12,82;UBERON:0001434,5.33e-12,100;UBERON:0002405,1.99e-10,93;UBERON:0000926,7.28e-10,315;UBERON:0004120,7.28e-10,315;UBERON:0006603,7.28e-10,315;UBERON:0002390,6.12e-09,98;UBERON:0003061,6.12e-09,98;UBERON:0002193,2.39e-08,108 | |||
|phase1_expression=1.45342703416445,2.99740733447376,3.94672331468719,1.0007329835313,2.23480547213644,2.61701557230111,2.53299878168311,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,2.22779435328084,1.65698687863958,2.01697543935533,1.80808358407193,2.19093027116212,0.975865597581014,0.246242116153576,0,0,0,0.547497700291537,0.376627918784408,0.305653622991805,0.328402357799783,0.550975469195755,1.18009283054671,0.767658796194425,0,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,2.21598163412751,5.01361118675354,3.03815219002193,0,0.647787332037959,0.515151135268373,1.16318591023652,0.755751887377619,0.242584061187816,2.32429036905685,2.87817521615278,2.16794459626573,2.8769239232215,2.0492856522328,3.78371567821736,5.86067657252252,4.51839278508678,1.35426486594342,4.32957380947991,2.18324920046277,2.69668181334102,4.28517449319264,5.1348644332175,7.67204550958849,1.31940520074686,4.3882004676759,3.40979800426155,7.2552309657146,1.13477044938228,1.24564449799115,4.01997864410789,4.17186334736161,1.52032191293582,6.65939452896706,1.47311054395026,3.79754864929061,1.47878700418359,0.425208599930087,0.838634582033504,0.673971786878971,1.50176892841506,1.12507910687956,0.285012743741249,0.99458338599545,0,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,2.34894875748376,0.764546456250458,0,1.68152568894461,0,0.393419540227666,1.96505381374582,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.589211814949674,0,0,0,0.130059347559878,0.657751618414705,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0,0.383959833463255,0,0,0,0.403213486449465,0.534880391567015,1.15859523106239,2.43806866313962,3.35350429851818,1.2786256184353,1.0843174571537,1.50401373190767,2.17269778441236,0.795285947051099,1.45990461090791,1.22895262313288,1.77383517970051,2.19586964232815,0,0,0.370784442784429,0.324547393654683,0.348259474598534,1.32957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,1.42306505074684,1.33888245105868,0.805658634218294,0.760272105718513,0,0,0,0.357198913136319,0.44905874525234,0.563057402416611,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0.436094052142534,1.98788780678127,0.379891534993739,0.794455084879313,3.15520282823695,1.41867352879343,2.80338800071154,0,0.49333509683432,1.24484414159907,1.48181739276657,1.47115712802113,0.151357427644931,1.72852777344,0.234321431833797,1.87296046098192,0,1.19558944441441,0.704606991862589,0.485618833104395,0.421352420106746,0.816616685019573,0.491337269247072,0.309977343527296,1.18800285728205,1.48360157567134,0,0.718618141816238,0.336672227908132,0.625592599359821,0,0.438977620880838,1.22595118319608,0.901428353439581,1.13432183160021,2.15267562826634,0.85422955527427,3.39091041855299,1.80054657650641,1.13357782162283,2.06112432036503,0.930584281657949,1.0126579934476,1.16924406193438,2.01947019395292,0.920498986422993,0,1.42003837006646,0.705264687593482,0.847802961552438,0.57978255948989,0.545492241181669,0,0.609868530647977,0.530119073285941,0.580969714347592,0.207322110030741,0.252320850875628,1.45990943630332,0,1.28648187638577,0,1.39310378409594,0,1.30137480043828,1.01150814046861,1.44606617930089,1.65440959098591,1.52515610864684,1.66089433377768,1.21348177344148,1.37355025587742,1.15424147083917,0,0,0,0,0,2.94848165003288,0.590789906681404,0.441463099414651,0,1.71567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.695582429850461,1.52631302506568,0.288732895522148,0.462985512576611,1.14152491340759,0.790204397959275,0.858486162094873,0.246217006087397,0.468008530278475,0.743155811443641,0.93733833986777,1.00789276919316,0.708875486211932,0.626909658919938,0.581267877027924,0.766765358330422,4.92663237895944,0.264145302039678,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0.381988425558278,1.17217447210047,0,0.514137463516618,1.20137223137567,0.571652865261156,0.224262168690721,0.43596006883328,1.24675085895615,0.387815147273333,0,2.535908257668,1.32969058292435,0,0.257207374262142,0,0.799266537048298,3.43147184779554,0,0.823240336780769,0.977208552881205,2.13235169245527,2.37585561880029,0.904318131178758,0.871533458600294,1.19967589418468,0,3.51579964002488,6.32501818449095,0.718874566474748,1.14861935834114,0,2.60606352001643,2.05476322550383,1.79060963239896,0.336255431980582,0,0.215627574859517,0.77005821767849,0.76228387266739,0,0,0.167516265334349,0,9.73709131131337,41.8826042885635,4.14415513436035,0.613457458595699,2.00068208423871,1.35632511849868,2.9115920614313,2.3195768543631,2.36553622550902,0.819989904948992,0,0,0,1.99267679560631,0.553107505625109,0,0.195801157462741,0,0.413536052245775,2.15714200818617,0.640365346820666,0.303127571446259,0,0.604780586659361,4.21783273291921,1.84154367945675,3.92924132206303,3.97231362692673,1.53512174720011,5.46903331888265,2.96836132889982,0.462629081407967,1.24293207719189,0.492762936082855,1.55776328755086,0.813472649219715,0.483437798366489,1.40354529212299,1.65745780084613,0.459257792658427,0.182091168006717,0.655622074797121,0,0.385076685522074,0,0,0.422206515571503,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0.976135183992909,0.515205058238611,0.366277859273374,0.082509499920588,0,0.650060246036521,1.6068392984416,0.48335359146061,0.462145851343933,1.68854042198743,0.689182862422653,1.07420244868274,2.17525040871343,1.10794615640931,0.623224249527161,1.32227932288782,2.30628080838127,0.382838137483752,2.4277867405332,2.78907329578371,2.83331112147576,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.572499546967965,0.372158369359667,3.79655309662471,4.19386426632415,0,2.1396949401696,0.318203247925937,0,1.07923474549989,3.84351841630477,1.64937363283961,0.404364963146632,3.17020642346017,0,0.975267478179181,2.19342140668156,0,0.682499557039929,1.27264888758341,0,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0,0.281695602532241,1.43411352204052,1.17898849215745,0,0.709522128141196,1.47775344708365,0.329294892959902,0,0,0.48111056362756,0.670302275535787,0,0.376575203107117,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0.0711418433484141,0,0.59873811429845,0.383010740264733,0,0.649243880549111,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.439524537815682,0.242721043499027,0.334330152832435,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0.333926115068718,0.824019371133798,0.63337622438398,0.398495976502139,0,0.251932747854276,0.511343412510774,0.123084805461069,3.42143546427988,0.629078458031288,0.537063524026827,0,0.394573622547734,2.3948309234694,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0,0.568967241427498,1.27126825146383,0.472775363535873,0,0,0.173624994933292,0,0,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0.139423744278603,0.153900517007594,1.13942055847001,0,0.359030577639089,0.760531603454056,0.957003479195758,0.641183153813036,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,2.95397290339238,1.14262965711403,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0.234264445725339,1.094728735294,0,0.485560759068186,0.789168805698781,1.20990716048664,0.61214552326098,0.442306057399416,0.150323419414493,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0.867798691675654,0.293977192243133,0.435296032902013,0.52418000472609,1.20390222730132,0.580537987734511,0.511625219603299,0.410577285266046,0.387956065953678,0,0.677942222341597,0.959293472527256,0.19871461170299,0.253243183823515,0.195551382734803,0.400794101257669,0.640358984218058,0.19980960958213,0,0,0,0.288109595976299,0.372757606696298,0.707082103850386,0.543616824294456,0.313808538937,0.611989305817931,0.288950589901519,1.20084057741958,0.547621515567972,1.27746588066972,0.859530882839914,0.262887354279314,0.558564802544508,0.458320848023367,0,0.599037001496973,0,0,0.134366944973453,0.360299883542404,0,0.236349546921671,0,0.471824806979294,0.295282444544246,0.169346664131569,2.38568906942791,0.272406812223151,0.482259445395058,0.687697182986169,0,0.2249738915515,0,0,0.670869375198532,0.86686278029118,0.0524545881349981,0,0.717149357331379,0.191915197319445,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0.246277562248017,0.511164065356265,1.01980882368113,0.439656701034247,0,0.517131825446202,0.52893040697076,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,0.197611631897944,0.365377795142688,0,0,0,0.306345576763462,0,0,0,2.44052529803926,0.250381861413,0,0.110929051536852,0,0.276697269872462,0.249960815924213,0.454947352624943,0.856396000634902,1.88212655758537,0,0,1.34329322598187,1.63599316893057,0,2.27283606330107,1.50940741051545,3.55924488638614,0.228840068396924,2.26846385644859,1.08806040407946,1.03498604992744,1.27437413730962,1.34940933649081,1.39736661188633,1.65882483136342,1.86089200190596,1.5652351854352,0.450772826991655,1.90402606084398,2.84809513243263,2.00033525122815,0.966695013382396,1.39210127963548,2.3885753321917,3.20022211730523,2.06037423109676,2.69399591012735,0,0,0,0.260994291965212,1.36023555307363,0.231522474323834,0.489473409012935,0,0,1.09642024789354,0.353378291891762,0.578742114812744,0.337884881306145,0.76872455576384,0.345430341731199,1.21543982470953,0.138258436151731,0.194860308839388,0.132864840313363,0.490696182767533,4.25892803500336,4.42391235756695,1.05656061679314,0.19998739585493,0,0,0,0.368211900503681,0.139879507719444,1.24415452006595,0.127894371303652,0.323474434190045,0.157265941855896,0.436838552768056,0.169732529954025,0.425149840203366,0.123935764259002,0,3.18004350653419,0.0788617450012534,0,2.1160556621441,1.531227386766,0.128458450192919,0,0.319267718114302,1.23069818544453,0.252071696221718,0.0691572524642179,0,0,0,0.589848616738702,1.10057159113007,0.346576998451015,2.66967466827017,0,0.198916222116275,0.225630985047772,2.82387096184928,0.781514011233092,0.261906694481422,0.655087670040387,0.147856086217045,0.135075169236789,0,0.620060389503552,0.0634158101939068,1.09394961803644,0,0.992422356778588,0,0.383287282918786,0.535701835878287,0.672567444437648,0,0.227662191351298,0.354809480650555,0,0.857440047187092,0,0,0.354581522651905,1.00108261702862,0.078493092850514,0.785577949580009,0,0.913158720509496,0.431855182437243,0.47775168788705,0.142953088353313,0.316027223465453,0.348724276104376,0,0,0.207216164163037,0,0,0,0.354996002191696,0,1.69354820076372,1.14553434272025,2.17144469965024,1.91107787795487,0.671132590786754,0.098150233615243,0.243835849964539,0,0.205325613712494,0,0.485710993059139,0.233939463462106,0,0.118920090777569,0.33883824611688,0.109940516745429,0.452888530700021,0.231522474323834,0.437119121007915,0,0.245148321753905,0.471353094203252,0.392616934229891,0.297046400327086,0,2.0391253762538,0.563903507879121,0.128915775947154,0.299823467774787,0,0.352894871715692,1.36410323371586,0,0,0.430018749454354,0,0.0679914901909147,0,0,3.71995018166751,0,2.59575937274273,0.756998549010474,0.437062287854782,0.506794004045748,0.203977659483963,0.26721740526556,0.0918948995348449,0.250707539292375,0.303114792872958,0,0.829169439458779,0.103432995861895,0.426467963801962,0.23806443146374,0.0645889098360061,0.186224142887574,1.00918676322552,0.190941474834495,0.606351566874658,0.217716747896961,0.684466602170562,0.26940821205835,0.645499848534087,0,0.325613074443898,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0,0.641136984606466 | |||
|short_description=p7@HIF1A | |||
}} |
Latest revision as of 23:27, 24 September 2015
Short description: | p7@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HIF1A_5end |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | 326bp_to_ENST00000556237_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-20 | 42 |
defensive cell | 1.75e-19 | 48 |
phagocyte | 1.75e-19 | 48 |
multi fate stem cell | 8.44e-18 | 427 |
myeloid leukocyte | 2.39e-17 | 72 |
somatic stem cell | 6.48e-17 | 433 |
stem cell | 2.64e-16 | 441 |
monopoietic cell | 5.60e-15 | 59 |
monocyte | 5.60e-15 | 59 |
monoblast | 5.60e-15 | 59 |
promonocyte | 5.60e-15 | 59 |
macrophage dendritic cell progenitor | 4.53e-14 | 61 |
connective tissue cell | 1.10e-13 | 361 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.74e-13 | 66 |
mesenchymal cell | 1.03e-12 | 354 |
motile cell | 8.80e-10 | 386 |
myeloid cell | 2.05e-07 | 108 |
common myeloid progenitor | 2.05e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.51e-15 | 167 |
connective tissue | 3.99e-14 | 371 |
bone marrow | 1.13e-13 | 76 |
skeletal element | 1.20e-13 | 90 |
bone element | 1.79e-12 | 82 |
skeletal system | 5.33e-12 | 100 |
immune system | 1.99e-10 | 93 |
mesoderm | 7.28e-10 | 315 |
mesoderm-derived structure | 7.28e-10 | 315 |
presumptive mesoderm | 7.28e-10 | 315 |
hematopoietic system | 6.12e-09 | 98 |
blood island | 6.12e-09 | 98 |
hemolymphoid system | 2.39e-08 | 108 |