FFCP PHASE1:Hg19::chr11:109963716..109963724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85463 | |EntrezGene=85463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |HGNC=29362 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-201bp_to_uc010rwc.1_5end | |association_with_transcript=-201bp_to_uc010rwc.1_5end | ||
|cluster_id=chr11:109963716..109963724,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_19_at_ZC3H12C_5end | |description=CAGE_peak_19_at_ZC3H12C_5end | ||
|id=chr11:109963716..109963724,+ | |id=chr11:109963716..109963724,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.20e-29!42;CL:0000860!9.57e-27!45;CL:0002009!4.10e-22!65;CL:0000557!1.09e-19!71;CL:0000766!2.11e-19!76;CL:0002194!7.68e-19!63;CL:0000576!7.68e-19!63;CL:0000040!7.68e-19!63;CL:0000559!7.68e-19!63;CL:0000763!2.94e-17!112;CL:0000049!2.94e-17!112;CL:0000839!2.30e-16!70;CL:0000738!2.39e-13!140;CL:0000037!4.45e-11!172;CL:0000566!4.45e-11!172;CL:0002032!4.57e-10!165;CL:0000837!4.57e-10!165;CL:0000988!5.19e-10!182;CL:0002031!1.68e-09!124;CL:0000767!2.28e-09!3;CL:0002087!4.64e-09!119;CL:0001014!1.20e-07!2;CL:0001016!1.20e-07!2;CL:0000451!6.29e-07!10 | |ontology_enrichment_celltype=CL:0002057!4.20e-29!42;CL:0000860!9.57e-27!45;CL:0002009!4.10e-22!65;CL:0000557!1.09e-19!71;CL:0000766!2.11e-19!76;CL:0002194!7.68e-19!63;CL:0000576!7.68e-19!63;CL:0000040!7.68e-19!63;CL:0000559!7.68e-19!63;CL:0000763!2.94e-17!112;CL:0000049!2.94e-17!112;CL:0000839!2.30e-16!70;CL:0000738!2.39e-13!140;CL:0000037!4.45e-11!172;CL:0000566!4.45e-11!172;CL:0002032!4.57e-10!165;CL:0000837!4.57e-10!165;CL:0000988!5.19e-10!182;CL:0002031!1.68e-09!124;CL:0000767!2.28e-09!3;CL:0002087!4.64e-09!119;CL:0001014!1.20e-07!2;CL:0001016!1.20e-07!2;CL:0000451!6.29e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.68e-99;2!CL:0001016;5.68e-99;2!CL:0000453;1.81e-40;5!CL:0000840;5.98e-34;5!CL:0000990;4.59e-23;8!CL:0000451;4.28e-19;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.68e-99,2;CL:0001016,5.68e-99,2;CL:0000453,1.81e-40,5;CL:0000840,5.98e-34,5;CL:0001029,5.98e-34,5;CL:0000990,4.59e-23,8;CL:0000451,4.28e-19,10;CL:0002009,1.29e-13,61;CL:0000557,1.71e-12,67;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.73e-17!80;UBERON:0001474!1.17e-16!86;UBERON:0002390!2.50e-15!102;UBERON:0003061!2.50e-15!102;UBERON:0002193!2.00e-14!112;UBERON:0004765!3.48e-13!101;UBERON:0001434!3.48e-13!101;UBERON:0002405!1.06e-12!115;UBERON:0002204!1.65e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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| ||
|short_description=p19@ZC3H12C | |short_description=p19@ZC3H12C | ||
}} | }} |
Latest revision as of 01:21, 25 September 2015
Short description: | p19@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ZC3H12C_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -201bp_to_uc010rwc.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.68e-99 | 2 |
immature CD1a-positive Langerhans cell | 5.68e-99 | 2 |
Langerhans cell | 1.81e-40 | 5 |
immature conventional dendritic cell | 5.98e-34 | 5 |
common dendritic progenitor | 5.98e-34 | 5 |
conventional dendritic cell | 4.59e-23 | 8 |
dendritic cell | 4.28e-19 | 10 |
macrophage dendritic cell progenitor | 1.29e-13 | 61 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |