FFCP PHASE1:Hg19::chr6:137243433..137243444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340146 | |EntrezGene=340146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15621 | |HGNC=15621 | ||
|TSSclassifier=strong | |||
|UniProt=Q5M8T2 | |UniProt=Q5M8T2 | ||
|association_with_transcript=31bp_to_ENST00000331858,NM_001008783,uc003qhe.2_5end | |association_with_transcript=31bp_to_ENST00000331858,NM_001008783,uc003qhe.2_5end | ||
|cluster_id=chr6:137243433..137243444,+ | |||
|description=CAGE_peak_2_at_SLC35D3_5end | |description=CAGE_peak_2_at_SLC35D3_5end | ||
|id=chr6:137243433..137243444,+ | |id=chr6:137243433..137243444,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;2.07e-18;6!CL:0000515;5.98e-17;3!CL:0000056;5.89e-13;4!CL:0002581;8.15e-13;1!CL:1000306;1.20e-12;4!CL:0002547;1.20e-12;4!CL:0000680;8.79e-08;7!CL:0002367;3.18e-07;2!CL:0002561;4.83e-07;2!CL:0002600;4.83e-07;2 | |ontology_enrichment_celltype_v019=CL:0002569;2.07e-18;6!CL:0000515;5.98e-17;3!CL:0000056;5.89e-13;4!CL:0002581;8.15e-13;1!CL:1000306;1.20e-12;4!CL:0002547;1.20e-12;4!CL:0000680;8.79e-08;7!CL:0002367;3.18e-07;2!CL:0002561;4.83e-07;2!CL:0002600;4.83e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.95e-18,6;CL:0000515,5.72e-13,4;CL:0002581,6.82e-13,1;CL:1000306,1.39e-12,4;CL:0002547,1.39e-12,4;CL:0002367,3.28e-07,2;CL:0002561,4.69e-07,2;CL:0002600,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;5.89e-13;4 | |ontology_enrichment_development_v019=CL:0000515;5.89e-13;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;2.22e-07;2!DOID:962;2.22e-07;2!DOID:3307;4.83e-07;2 | |ontology_enrichment_disease_v019=DOID:3193;2.22e-07;2!DOID:962;2.22e-07;2!DOID:3307;4.83e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,2.15e-07,2;DOID:962,2.15e-07,2;DOID:3307,4.17e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.07e-18;6!UBERON:0003104;7.14e-16;7!UBERON:0009142;7.14e-16;7!UBERON:0004797;1.20e-12;4!UBERON:0000415;1.20e-12;4!UBERON:0007240;1.20e-12;4!UBERON:0005742;1.20e-12;4!UBERON:0005734;1.20e-12;4!UBERON:0004664;1.20e-12;4!UBERON:0004663;1.20e-12;4!UBERON:0002331;2.74e-11;10!UBERON:0005969;3.18e-07;2!UBERON:0003956;3.18e-07;2!UBERON:0005933;4.83e-07;2!UBERON:0005942;4.83e-07;2!UBERON:0005406;4.83e-07;2!UBERON:0005932;4.83e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003422;2.07e-18;6!UBERON:0003104;7.14e-16;7!UBERON:0009142;7.14e-16;7!UBERON:0004797;1.20e-12;4!UBERON:0000415;1.20e-12;4!UBERON:0007240;1.20e-12;4!UBERON:0005742;1.20e-12;4!UBERON:0005734;1.20e-12;4!UBERON:0004664;1.20e-12;4!UBERON:0004663;1.20e-12;4!UBERON:0002331;2.74e-11;10!UBERON:0005969;3.18e-07;2!UBERON:0003956;3.18e-07;2!UBERON:0005933;4.83e-07;2!UBERON:0005942;4.83e-07;2!UBERON:0005406;4.83e-07;2!UBERON:0005932;4.83e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,1.95e-18,6;UBERON:0000415,1.39e-12,4;UBERON:0007240,1.39e-12,4;UBERON:0005742,1.39e-12,4;UBERON:0005734,1.39e-12,4;UBERON:0004664,1.39e-12,4;UBERON:0004663,1.39e-12,4;UBERON:0002331,2.65e-11,10;UBERON:0000358,2.65e-11,10;UBERON:0000307,2.65e-11,10;UBERON:0000091,2.65e-11,10;UBERON:0000087,2.65e-11,10;UBERON:0007010,2.65e-11,10;UBERON:0007806,2.65e-11,10;UBERON:0008780,2.65e-11,10;UBERON:0005728,2.65e-11,10;UBERON:0004797,1.43e-07,7;UBERON:0005969,3.28e-07,2;UBERON:0003956,3.28e-07,2;UBERON:0005406,4.42e-07,2;UBERON:0005933,4.69e-07,2;UBERON:0005942,4.69e-07,2;UBERON:0005932,4.69e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,2.01521918323448,0,0,0,0,0,0.132409180813219,4.87622255272983,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22456729165453,2.46972101034231,0,0.355391948742546,3.95975936466715,0,0,0.099972991182057,0,0,0,0,0,0,7.09428402671138,5.34238438630997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.623912584592421,0.356857977594324,0,0.468565659970853,0,0,2.0694614258501,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0,0,0,0,0,0,0,0,0,3.03578539012572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17739639275771,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,7.06790534516827,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0,0,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,2.01521918323448,0,0,0,0,0,0.132409180813219,4.87622255272983,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22456729165453,2.46972101034231,0,0.355391948742546,3.95975936466715,0,0,0.099972991182057,0,0,0,0,0,0,7.09428402671138,5.34238438630997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.623912584592421,0.356857977594324,0,0.468565659970853,0,0,2.0694614258501,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0,0,0,0,0,0,0,0,0,3.03578539012572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17739639275771,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,7.06790534516827,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p2@SLC35D3 | |short_description=p2@SLC35D3 | ||
}} | }} |
Latest revision as of 01:30, 25 September 2015
Short description: | p2@SLC35D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC35D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000331858, NM_001008783, uc003qhe.2_5end |
EntrezGene: | SLC35D3 |
HGNC: | 15621 |
UniProt: | Q5M8T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.95e-18 | 6 |
skeletal muscle myoblast | 5.72e-13 | 4 |
perirenal preadipocyte | 6.82e-13 | 1 |
fibroblast of tunica adventitia of artery | 1.39e-12 | 4 |
fibroblast of the aortic adventitia | 1.39e-12 | 4 |
trabecular meshwork cell | 3.28e-07 | 2 |
outer root sheath cell | 4.69e-07 | 2 |
smooth muscle cell of trachea | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 1.95e-18 | 6 |
artery wall | 1.39e-12 | 4 |
tunica adventitia of artery | 1.39e-12 | 4 |
adventitia | 1.39e-12 | 4 |
tunica adventitia of blood vessel | 1.39e-12 | 4 |
aorta tunica adventitia | 1.39e-12 | 4 |
aorta wall | 1.39e-12 | 4 |
umbilical cord | 2.65e-11 | 10 |
blastocyst | 2.65e-11 | 10 |
blastula | 2.65e-11 | 10 |
bilaminar disc | 2.65e-11 | 10 |
inner cell mass | 2.65e-11 | 10 |
cleaving embryo | 2.65e-11 | 10 |
connecting stalk | 2.65e-11 | 10 |
inner cell mass derived epiblast | 2.65e-11 | 10 |
extraembryonic mesoderm | 2.65e-11 | 10 |
blood vessel layer | 1.43e-07 | 7 |
reticulum trabeculare | 3.28e-07 | 2 |
aqueous drainage system | 3.28e-07 | 2 |
perirenal fat | 4.42e-07 | 2 |
hair root sheath | 4.69e-07 | 2 |
hair outer root sheath | 4.69e-07 | 2 |
bulb of hair follicle | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.15e-07 | 2 |
neurofibroma | 2.15e-07 | 2 |
teratoma | 4.17e-07 | 2 |