FFCP PHASE1:Hg19::chr20:30598204..30598223,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:30598204..30598223,+ to FFCP PHASE1:Hg19::chr20:30598204..30598223,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140706 | |EntrezGene=140706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16153 | |HGNC=16153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NUG4 | |UniProt=Q9NUG4 | ||
|association_with_transcript=-21bp_to_ENST00000300415,ENST00000339619,NM_080625,uc002wxf.2_5end | |||
|cluster_id=chr20:30598204..30598223,+ | |||
|coexpression_cluster_id=C2611 | |||
|description=CAGE_peak_3_at_C20orf160_5end | |||
|id=chr20:30598204..30598223,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.77e-38!24;CL:0000115!2.80e-36!35;CL:0000071!2.05e-29!18;CL:0002546!2.05e-29!18;CL:0002078!8.96e-27!44;CL:0000213!1.90e-18!57;CL:0000215!1.90e-18!57;CL:1000413!2.29e-15!9;CL:0002544!8.57e-11!6;CL:0002543!1.05e-10!6;CL:0005020!6.04e-10!6;CL:0002138!6.04e-10!6;CL:0005022!6.04e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.45e-55;24!CL:0000115;1.15e-46;36!CL:0000071;2.06e-46;18!CL:0002078;8.98e-28;45!CL:1000413;7.95e-21;9!CL:0000213;5.65e-20;58!CL:0000215;5.65e-20;58!CL:0002544;2.61e-16;6!CL:0002543;3.71e-16;6!CL:0002144;2.96e-13;3!CL:0002618;3.46e-12;3!CL:0002138;1.23e-10;6!CL:0002262;1.80e-09;2!CL:1000398;1.80e-09;2!CL:0002545;8.32e-09;2!CL:0002188;3.70e-08;5!CL:0000076;4.08e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.77e-58,36;CL:0002139,6.42e-55,24;CL:0000071,2.18e-46,18;CL:0002546,2.18e-46,18;CL:0002078,2.16e-45,45;CL:0000213,7.71e-34,58;CL:0000215,7.71e-34,58;CL:1000413,6.70e-21,9;CL:0002544,2.46e-16,6;CL:0002543,3.74e-16,6;CL:0002144,3.94e-13,3;CL:0000222,4.10e-13,121;CL:0002618,2.18e-12,3;CL:0000076,1.02e-10,63;CL:0005020,1.59e-10,6;CL:0002138,1.59e-10,6;CL:0005022,1.59e-10,6;CL:0002262,1.41e-09,2;CL:1000398,1.41e-09,2;CL:0002545,5.19e-09,2;CL:0002188,3.93e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.06e-46;18!CL:0005022;1.23e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-57!115;UBERON:0001986!2.05e-29!18;UBERON:0004638!2.05e-29!18;UBERON:0004852!2.05e-29!18;UBERON:0004111!2.60e-28!241;UBERON:0000477!5.33e-26!286;UBERON:0000025!1.01e-24!194;UBERON:0000487!6.03e-23!22;UBERON:0001049!6.78e-20!57;UBERON:0005068!6.78e-20!57;UBERON:0006241!6.78e-20!57;UBERON:0007135!6.78e-20!57;UBERON:0006914!1.80e-19!25;UBERON:0002616!6.68e-19!59;UBERON:0003080!3.86e-18!42;UBERON:0003075!4.51e-17!86;UBERON:0007284!4.51e-17!86;UBERON:0002780!6.71e-17!41;UBERON:0001890!6.71e-17!41;UBERON:0006240!6.71e-17!41;UBERON:0000055!5.14e-16!69;UBERON:0002346!8.07e-16!90;UBERON:0000955!1.28e-15!69;UBERON:0006238!1.28e-15!69;UBERON:0003915!2.29e-15!9;UBERON:0004700!2.29e-15!9;UBERON:0001917!2.29e-15!9;UBERON:0000483!5.28e-15!309;UBERON:0000119!1.20e-14!312;UBERON:0002049!1.12e-13!79;UBERON:0007798!1.12e-13!79;UBERON:0001017!1.57e-13!82;UBERON:0005743!1.68e-13!86;UBERON:0003056!2.57e-12!61;UBERON:0002020!5.03e-12!34;UBERON:0003528!5.03e-12!34;UBERON:0001893!7.88e-12!34;UBERON:0001981!7.90e-12!60;UBERON:0007500!7.90e-12!60;UBERON:0004537!7.90e-12!60;UBERON:0006965!7.90e-12!60;UBERON:0004872!1.74e-11!84;UBERON:0000073!2.55e-11!94;UBERON:0001016!2.55e-11!94;UBERON:0000153!4.61e-11!129;UBERON:0007811!4.61e-11!129;UBERON:0002791!5.06e-11!33;UBERON:0001009!5.49e-11!113;UBERON:0001869!2.50e-10!32;UBERON:0000468!3.91e-10!659;UBERON:0000467!6.99e-10!625;UBERON:0000480!8.11e-10!626;UBERON:0004535!2.49e-09!110;UBERON:0000033!3.10e-09!123;UBERON:0001638!3.70e-09!9;UBERON:0003920!3.70e-09!9;UBERON:0004582!3.70e-09!9;UBERON:0003914!5.12e-09!118;UBERON:0002619!1.17e-08!22;UBERON:0001950!3.34e-08!20;UBERON:0002298!3.40e-08!8;UBERON:0000064!1.35e-07!219;UBERON:0001894!2.61e-07!7;UBERON:0006222!2.61e-07!7;UBERON:0000956!2.68e-07!25;UBERON:0000203!2.68e-07!25;UBERON:0001473!3.28e-07!8;UBERON:0004536!3.28e-07!8;UBERON:0006558!3.28e-07!8;UBERON:0002465!3.31e-07!10;UBERON:0004121!5.76e-07!169;UBERON:0002308!8.65e-07!9;UBERON:0000125!8.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.06e-46;18!UBERON:0001986;2.06e-46;18!UBERON:0004852;2.06e-46;18!UBERON:0000487;2.62e-37;22!UBERON:0006914;2.15e-32;25!UBERON:0000490;5.12e-21;33!UBERON:0003915;7.95e-21;9!UBERON:0004700;7.95e-21;9!UBERON:0001917;7.95e-21;9!UBERON:0001638;5.35e-15;9!UBERON:0003920;5.35e-15;9!UBERON:0004582;5.35e-15;9!UBERON:0000055;1.80e-13;65!UBERON:0010523;2.96e-13;3!UBERON:0001915;2.96e-13;3!UBERON:0001982;2.96e-13;3!UBERON:0007500;2.58e-12;56!UBERON:0001981;2.58e-12;56!UBERON:0004537;2.58e-12;56!UBERON:0001281;1.80e-09;2!UBERON:0003497;1.80e-09;2!UBERON:0003909;1.80e-09;2!UBERON:0003835;1.80e-09;2!UBERON:0003914;2.98e-09;74!UBERON:0000025;8.15e-09;93!UBERON:0005800;8.32e-09;2!UBERON:0002081;8.32e-09;2!UBERON:0002133;8.32e-09;2!UBERON:0001515;8.32e-09;2!UBERON:0001473;5.46e-08;8!UBERON:0004536;5.46e-08;8!UBERON:0006558;5.46e-08;8!UBERON:0002049;1.12e-07;75!UBERON:0007798;1.12e-07;75!UBERON:0002066;1.74e-07;5!UBERON:0001009;2.13e-07;112!UBERON:0000353;8.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.18e-46,18;UBERON:0001986,2.18e-46,18;UBERON:0004852,2.18e-46,18;UBERON:0000487,2.73e-37,22;UBERON:0006914,2.23e-32,25;UBERON:0000055,1.54e-27,68;UBERON:0002049,3.09e-23,78;UBERON:0007798,3.09e-23,78;UBERON:0007500,5.16e-22,59;UBERON:0001981,5.16e-22,59;UBERON:0004537,5.16e-22,59;UBERON:0006965,5.16e-22,59;UBERON:0003915,6.70e-21,9;UBERON:0004700,6.70e-21,9;UBERON:0001917,6.70e-21,9;UBERON:0004872,9.50e-20,83;UBERON:0003914,1.29e-16,117;UBERON:0004535,1.87e-16,109;UBERON:0001009,7.49e-16,112;UBERON:0001638,4.74e-15,9;UBERON:0003920,4.74e-15,9;UBERON:0004582,4.74e-15,9;UBERON:0004111,6.82e-14,240;UBERON:0010523,3.94e-13,3;UBERON:0001915,3.94e-13,3;UBERON:0001982,3.94e-13,3;UBERON:0000025,3.02e-12,192;UBERON:0001281,1.41e-09,2;UBERON:0003497,1.41e-09,2;UBERON:0003909,1.41e-09,2;UBERON:0003835,1.41e-09,2;UBERON:0005800,5.19e-09,2;UBERON:0001515,5.19e-09,2;UBERON:0002081,7.42e-09,2;UBERON:0010227,7.42e-09,2;UBERON:0003887,1.25e-08,12;UBERON:0002133,1.50e-08,2;UBERON:0001473,6.59e-08,8;UBERON:0004536,6.59e-08,8;UBERON:0006558,6.59e-08,8;UBERON:0003081,8.81e-08,203;UBERON:0002066,1.32e-07,5;UBERON:0000353,8.50e-07,15 | |||
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| ||
|short_description=p3@C20orf160 | |||
}} | }} |
Latest revision as of 01:53, 25 September 2015
Short description: | p3@C20orf160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C20orf160_5end |
Coexpression cluster: | C2611_Hepatic_heart_breast_Renal_spleen_Endothelial_acute |
Association with transcript: | -21bp_to_ENST00000300415, ENST00000339619, NM_080625, uc002wxf.2_5end |
EntrezGene: | C20orf160 |
HGNC: | 16153 |
UniProt: | Q9NUG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.77e-58 | 36 |
endothelial cell of vascular tree | 6.42e-55 | 24 |
blood vessel endothelial cell | 2.18e-46 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.18e-46 | 18 |
meso-epithelial cell | 2.16e-45 | 45 |
lining cell | 7.71e-34 | 58 |
barrier cell | 7.71e-34 | 58 |
endothelial cell of artery | 6.70e-21 | 9 |
aortic endothelial cell | 2.46e-16 | 6 |
vein endothelial cell | 3.74e-16 | 6 |
capillary endothelial cell | 3.94e-13 | 3 |
mesodermal cell | 4.10e-13 | 121 |
endothelial cell of umbilical vein | 2.18e-12 | 3 |
squamous epithelial cell | 1.02e-10 | 63 |
lymphangioblast | 1.59e-10 | 6 |
endothelial cell of lymphatic vessel | 1.59e-10 | 6 |
vascular lymphangioblast | 1.59e-10 | 6 |
endothelial cell of sinusoid | 1.41e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.41e-09 | 2 |
thoracic aorta endothelial cell | 5.19e-09 | 2 |
glomerular endothelial cell | 3.93e-08 | 5 |