FFCP PHASE1:Hg19::chr17:43568062..43568089,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:43568062..43568089,-
|short_description=p1@PLEKHM1
|description=CAGE_peak_1_at_PLEKHM1_5end
|association_with_transcript=4bp_to_ENST00000421073_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9842 | |EntrezGene=9842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29017 | |HGNC=29017 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4G2 | |UniProt=Q9Y4G2 | ||
|association_with_transcript=4bp_to_ENST00000421073_5end | |||
|cluster_id=chr17:43568062..43568089,- | |||
|description=CAGE_peak_1_at_PLEKHM1_5end | |||
|id=chr17:43568062..43568089,- | |||
|ontology_enrichment_celltype=CL:0000766!1.61e-25!76;CL:0002057!2.93e-23!42;CL:0000557!7.83e-22!71;CL:0000839!3.16e-21!70;CL:0000860!4.15e-21!45;CL:0002194!1.29e-20!63;CL:0000576!1.29e-20!63;CL:0000040!1.29e-20!63;CL:0000559!1.29e-20!63;CL:0000738!1.66e-20!140;CL:0002009!4.89e-20!65;CL:0002087!2.09e-16!119;CL:0002031!2.85e-16!124;CL:0000037!3.00e-15!172;CL:0000566!3.00e-15!172;CL:0000763!4.77e-15!112;CL:0000049!4.77e-15!112;CL:0000988!1.48e-13!182;CL:0002032!2.46e-13!165;CL:0000837!2.46e-13!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.63e-38;33!CL:0002057;5.63e-38;33!CL:0000473;3.06e-34;39!CL:0000234;3.06e-34;39!CL:0000576;9.09e-31;48!CL:0000766;8.34e-25;69!CL:0002087;1.13e-13;104!CL:0000094;9.02e-12;8!CL:0000763;2.57e-11;100!CL:0000738;2.39e-10;136!CL:0000081;3.91e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.51e-55,72;CL:0000473,1.49e-51,48;CL:0000234,1.49e-51,48;CL:0000860,5.14e-49,42;CL:0002057,5.14e-49,42;CL:0000738,7.73e-48,136;CL:0002194,1.05e-47,59;CL:0000576,1.05e-47,59;CL:0000040,1.05e-47,59;CL:0000559,1.05e-47,59;CL:0002009,1.12e-45,61;CL:0000557,1.15e-44,67;CL:0000839,3.18e-43,66;CL:0002087,3.68e-41,115;CL:0000037,2.82e-37,168;CL:0002031,1.77e-35,120;CL:0000763,2.36e-34,108;CL:0000049,2.36e-34,108;CL:0000988,2.87e-34,177;CL:0002032,2.45e-33,161;CL:0000837,2.45e-33,161;CL:0000094,7.94e-12,8;CL:0000134,1.48e-09,354;CL:0002320,5.29e-09,361;CL:0002393,1.14e-08,9;CL:0002397,1.14e-08,9;CL:0000081,3.57e-08,11;CL:0000219,5.50e-08,386;CL:0000723,1.91e-07,433;CL:0000048,1.93e-07,427;CL:0000034,2.25e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-35;42!CL:0000049;3.64e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.11e-23!112;UBERON:0002390!1.93e-20!102;UBERON:0003061!1.93e-20!102;UBERON:0002371!1.60e-18!80;UBERON:0002405!2.37e-18!115;UBERON:0001474!1.85e-15!86;UBERON:0004765!1.65e-11!101;UBERON:0001434!1.65e-11!101;UBERON:0003081!2.33e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.58e-39,108;UBERON:0002405,1.45e-38,93;UBERON:0002371,1.26e-37,76;UBERON:0002390,1.41e-36,98;UBERON:0003061,1.41e-36,98;UBERON:0001474,8.48e-34,82;UBERON:0004765,1.69e-29,90;UBERON:0001434,4.13e-25,100;UBERON:0003081,2.38e-17,203;UBERON:0002204,1.16e-11,167;UBERON:0002384,2.95e-08,371;UBERON:0000926,3.83e-07,315;UBERON:0004120,3.83e-07,315;UBERON:0006603,3.83e-07,315 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0,0.152826811495903,0.246301768349837,0.393553906568396,2.75354993794233,3.45446458287491,3.71558695958582,0.919421224478927,0.90361775633475,1.47901604066715,0.154934401160603,0.142169232487422,0.293600439334847,3.32397245119126,1.80490002723128,4.77423915574874,1.79132379391939,1.6194683300949,1.80302897343931,4.79814187972564,3.77875943688809,1.21292030593908,3.71886459049095,3.70051099219643,4.02618282163635,2.3015391385772,2.0492856522328,1.89185783910868,4.48169384957604,4.51839278508678,0,2.63539275359647,2.45615535052061,1.79778787556068,2.14258724659632,2.56743221660875,3.19668562899521,2.96866170168044,2.99195486432448,2.13112375266347,2.03146467040009,1.13477044938228,0.622822248995575,4.77372463987812,3.12889751052121,4.12658804939722,1.81619850790011,1.84138817993782,0.949387162322653,0.845021145247767,1.27562579979026,0.628975936525128,1.57260083605093,1.35159203557356,2.4108838004562,2.85012743741249,1.19350006319454,2.19196984517561,0,0,0,1.28019066769952,0.400395987036012,0,0,0,1.70763890732835,1.17447437874188,1.52909291250092,0,1.68152568894461,0.263384084775077,1.37696839079683,0.786021525498329,2.87842098599313,0.167186495390678,1.62961133316795,1.4203434172042,1.94826728407911,0.222820913770347,0.294605907474837,0.664601683750863,2.43723477388514,0.768547918354051,1.30059347559878,0.328875809207352,0.276350017785848,0.869409257205157,0.444859689486181,0.267540828089713,2.09071047609954,0.226618685395132,1.14966148080576,1.03088233644789,1.77113784413652,0,0,0.950452044448374,0,0,0,0.710331756132051,0.821127996921047,2.21767417547206,4.27904313253612,4.05508330871837,0,0.670700859703636,0.383587685530591,0,0,0.434539556882471,0,0,0.472674085820339,0,0.263504357079378,0.130979075497713,0,0.370784442784429,0,0.348259474598534,0.531831842075461,3.57735936458013,1.14398982156026,1.11437250398869,1.19257444420023,0,0,1.13061588384802,2.09749718104953,0.825354125820202,0.626984899610432,2.06733407335463,1.06729878806013,0.66944122552934,0,0.760272105718513,2.4406205754817,0,0,0.625098097988558,1.34717623575702,0.900891843866578,0,1.89853131913626,0.916008719652036,5.27121669744253,7.75560528296651,0.436094052142534,0,0.25326102332916,1.58891016975863,0,0.709336764396714,0,0,0.98667019366864,0.311211035399766,0.538842688278752,0,0,0,0,0.312160076830321,0,0.597794722207204,0,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0,1.15956511897978,0.545492241181669,1.14721838155602,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.98775256867763,1.1240175325762,0.301586917234893,0.185176890317059,0.651616610620649,0,0,0.463721619900307,0,1.29929802984966,1.38895653772983,0.380508304469197,0,0,2.46217006087397,0.234004265139238,1.63494278517601,0,0.335964256397719,0.425325291727159,0.626909658919938,0,0.383382679165211,0.985326475791887,0.176096868026452,0.829312462163088,1.58531948758658,0.75745460055828,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.904318131178758,1.74306691720059,0.699810938274399,1.2162378064119,1.50677127429638,0,0.239624855491583,0,1.42636905040718,0.579125226670317,0,0.358121926479791,0.336255431980582,1.97030760201927,4.31255149719035,5.64709359630893,0.254094624222463,0,0,0,0,6.74106321552464,0,10.3603878359009,0.12269149171914,0,0,0,0.535286966391485,0.473107245101804,0,0,4.5481500811197,0,0,0.553107505625109,0.521301686808497,0,0.343143423810856,1.24060815673732,1.94142780736755,4.26910231213777,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0.768834895534206,0.511707249066704,0.965123526861645,0,0.462629081407967,0.710246901252508,0.164254312027618,1.03850885836724,0.116210378459959,0.120859449591622,0.601519410909855,2.11786274552562,0.114814448164607,0.546273504020151,0.917870904715969,0.451199612907412,0.693138033939733,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0,0,2.49322802678617,0.671624264166535,0.657779629937804,0,0.512900250232778,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.426133137080504,0,1.32227932288782,0.576570202095319,0.382838137483752,0.809262246844399,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.14312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| ||
|short_description=p1@PLEKHM1 | |||
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Latest revision as of 01:55, 25 September 2015
Short description: | p1@PLEKHM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000421073_5end |
EntrezGene: | PLEKHM1 |
HGNC: | 29017 |
UniProt: | Q9Y4G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.58e-39 | 108 |
immune system | 1.45e-38 | 93 |
bone marrow | 1.26e-37 | 76 |
hematopoietic system | 1.41e-36 | 98 |
blood island | 1.41e-36 | 98 |
bone element | 8.48e-34 | 82 |
skeletal element | 1.69e-29 | 90 |
skeletal system | 4.13e-25 | 100 |
lateral plate mesoderm | 2.38e-17 | 203 |
musculoskeletal system | 1.16e-11 | 167 |
connective tissue | 2.95e-08 | 371 |
mesoderm | 3.83e-07 | 315 |
mesoderm-derived structure | 3.83e-07 | 315 |
presumptive mesoderm | 3.83e-07 | 315 |