FFCP PHASE1:Hg19::chr22:44419792..44419818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |EntrezGene=29780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |HGNC=14653 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBI1 | |UniProt=Q9HBI1 | ||
|association_with_transcript=-338bp_to_ENST00000338758,NM_013327_5end | |association_with_transcript=-338bp_to_ENST00000338758,NM_013327_5end | ||
|cluster_id=chr22:44419792..44419818,+ | |||
|description=CAGE_peak_7_at_PARVB_5end | |description=CAGE_peak_7_at_PARVB_5end | ||
|id=chr22:44419792..44419818,+ | |id=chr22:44419792..44419818,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.17e-12!42;CL:0000860!3.03e-10!45;CL:0002139!3.41e-09!24;CL:0000557!1.33e-07!71;CL:0000115!5.35e-07!35;CL:0002009!6.82e-07!65;CL:0000766!7.26e-07!76;CL:0000080!9.28e-07!6 | |ontology_enrichment_celltype=CL:0002057!9.17e-12!42;CL:0000860!3.03e-10!45;CL:0002139!3.41e-09!24;CL:0000557!1.33e-07!71;CL:0000115!5.35e-07!35;CL:0002009!6.82e-07!65;CL:0000766!7.26e-07!76;CL:0000080!9.28e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.94e-10;2!CL:0001016;1.94e-10;2!CL:0000097;6.48e-10;5!CL:0002138;2.11e-08;6!CL:0002393;5.41e-08;6!CL:0002397;5.41e-08;6!CL:0000840;1.23e-07;5!CL:0000226;3.10e-07;3!CL:0000784;3.10e-07;3!CL:0000842;3.10e-07;3!CL:0000451;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.87e-11,67;CL:0001014,2.04e-10,2;CL:0001016,2.04e-10,2;CL:0000097,6.42e-10,5;CL:0002028,6.42e-10,5;CL:0000738,2.11e-09,136;CL:0000988,4.82e-09,177;CL:0000766,1.79e-08,72;CL:0005020,2.14e-08,6;CL:0002138,2.14e-08,6;CL:0005022,2.14e-08,6;CL:0000839,5.43e-08,66;CL:0000840,1.04e-07,5;CL:0001029,1.04e-07,5;CL:0000784,2.74e-07,3;CL:0000226,2.83e-07,3;CL:0000842,2.83e-07,3;CL:0002009,3.82e-07,61;CL:0000451,4.72e-07,10;CL:0000037,8.02e-07,168 | |||
|ontology_enrichment_development_v019=CL:0005022;2.11e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.53e-09!112;UBERON:0007023!1.27e-08!115;UBERON:0002390!2.82e-07!102;UBERON:0003061!2.82e-07!102 | |ontology_enrichment_uberon=UBERON:0002193!3.53e-09!112;UBERON:0007023!1.27e-08!115;UBERON:0002390!2.82e-07!102;UBERON:0003061!2.82e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.99e-08;15!UBERON:0000179;7.99e-08;15!UBERON:0000463;7.99e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.29e-16,108;UBERON:0002390,2.82e-13,98;UBERON:0003061,2.82e-13,98;UBERON:0002405,3.47e-11,93;UBERON:0002371,2.83e-09,76;UBERON:0001474,2.14e-08,82;UBERON:0000178,6.22e-08,15;UBERON:0000179,6.22e-08,15;UBERON:0000463,6.22e-08,15;UBERON:0004765,2.08e-07,90;UBERON:0003081,2.61e-07,203 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.0787107813136792,1.18009283054671,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0,0,0.587200878669695,0,3.20871115952227,3.47217393145363,0,0,0,0,0.377875943688809,0.242584061187816,0,0.822335776043652,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,1.12361742222542,0.612167784741805,0.641858054152187,1.91801137739712,0,0,0,0.290209238628584,0,1.24564449799115,0.251248665256743,0,0.65156653411535,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,1.04829322754188,0.22465726229299,0.300353785683013,0,0.855038231223746,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0.370784442784429,0.324547393654683,0,0.132957960518865,1.66943437013739,1.14398982156026,0,0.596287222100115,0,1.04142150482278,0,0.838998872419812,0.825354125820202,0.208994966536811,0.775250277507987,0,0.33472061276467,0.402829317109147,0.760272105718513,1.46437234528902,0.367663080345869,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,1.1409436430889,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.482022059766964,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,6.0633908059651,9.72269576410883,10.0834700684337,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,4.76854665743776,10.3766366460212,4.29224273649692,0.190493682876507,0.763976851116555,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0.620304078368662,1.07857100409308,1.921096040462,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0,4.62681758070868,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0.165018999841176,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.635020748171649,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.284136146806413,0,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0.251932747854276,0,0.615424027305347,0,0,0.179021174675609,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.707660516026713,0,5.04085918757057,1.35920332841153,1.77517314159274,0.134802265961354,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0,0.126373159256976,1.80388103297391,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0.160317640503067,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0.558564802544508,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0.0674035438541849,0.0984274815147488,0.423366660328922,0,0,0,0,0,1.1248694577575,1.5476039091159,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,3.7603484103405,1.83807346058077,2.29510841496863,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.434674820589684,0,0.124980407962107,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.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| ||
|short_description=p7@PARVB | |short_description=p7@PARVB | ||
}} | }} |
Latest revision as of 01:59, 25 September 2015
Short description: | p7@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | -338bp_to_ENST00000338758, NM_013327_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | Q9HBI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.87e-11 | 67 |
CD1a-positive Langerhans cell | 2.04e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-10 | 2 |
mast cell | 6.42e-10 | 5 |
basophil mast progenitor cell | 6.42e-10 | 5 |
leukocyte | 2.11e-09 | 136 |
hematopoietic cell | 4.82e-09 | 177 |
myeloid leukocyte | 1.79e-08 | 72 |
lymphangioblast | 2.14e-08 | 6 |
endothelial cell of lymphatic vessel | 2.14e-08 | 6 |
vascular lymphangioblast | 2.14e-08 | 6 |
myeloid lineage restricted progenitor cell | 5.43e-08 | 66 |
immature conventional dendritic cell | 1.04e-07 | 5 |
common dendritic progenitor | 1.04e-07 | 5 |
plasmacytoid dendritic cell | 2.74e-07 | 3 |
single nucleate cell | 2.83e-07 | 3 |
mononuclear cell | 2.83e-07 | 3 |
macrophage dendritic cell progenitor | 3.82e-07 | 61 |
dendritic cell | 4.72e-07 | 10 |
hematopoietic stem cell | 8.02e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.29e-16 | 108 |
hematopoietic system | 2.82e-13 | 98 |
blood island | 2.82e-13 | 98 |
immune system | 3.47e-11 | 93 |
bone marrow | 2.83e-09 | 76 |
bone element | 2.14e-08 | 82 |
blood | 6.22e-08 | 15 |
haemolymphatic fluid | 6.22e-08 | 15 |
organism substance | 6.22e-08 | 15 |
skeletal element | 2.08e-07 | 90 |
lateral plate mesoderm | 2.61e-07 | 203 |