FFCP PHASE1:Hg19::chr1:100503682..100503729,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:100503682..100503729,+ to FFCP PHASE1:Hg19::chr1:100503682..100503729,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64645 | |EntrezGene=64645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23363 | |HGNC=23363 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MC6 | |UniProt=Q96MC6 | ||
|association_with_transcript=29bp_to_ENST00000370152_5end | |||
|cluster_id=chr1:100503682..100503729,+ | |||
|coexpression_cluster_id=C878 | |||
|description=CAGE_peak_2_at_HIAT1_5end | |||
|id=chr1:100503682..100503729,+ | |||
|ontology_enrichment_celltype=CL:0000723!1.19e-17!436;CL:0000048!1.49e-17!430;CL:0000034!2.68e-17!444;CL:0000012!8.49e-16!682;CL:0000548!3.05e-15!679;CL:0000004!3.05e-15!679;CL:0000255!3.05e-15!679;CL:0000134!5.30e-15!358;CL:0000003!1.12e-13!722;CL:0002320!1.42e-13!365;CL:0000144!1.33e-12!625;CL:0000063!3.16e-12!578;CL:0000219!1.06e-11!390;CL:0000738!1.48e-11!140;CL:0002371!1.70e-11!591;CL:0000860!8.96e-11!45;CL:0002057!1.10e-10!42;CL:0000766!1.43e-10!76;CL:0000988!2.88e-10!182;CL:0000037!3.94e-10!172;CL:0000566!3.94e-10!172;CL:0002032!4.00e-09!165;CL:0000837!4.00e-09!165;CL:0000557!8.35e-09!71;CL:0002031!1.49e-08!124;CL:0000763!2.25e-08!112;CL:0000049!2.25e-08!112;CL:0002009!4.70e-08!65;CL:0000839!5.90e-08!70;CL:0002087!7.22e-08!119;CL:0002194!2.50e-07!63;CL:0000576!2.50e-07!63;CL:0000040!2.50e-07!63;CL:0000559!2.50e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.16e-10;33!CL:0002057;6.16e-10;33!CL:0000473;2.71e-07;39!CL:0000234;2.71e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.00e-17,433;CL:0000048,4.54e-17,427;CL:0000034,9.00e-17,441;CL:0000134,1.29e-14,354;CL:0002320,3.31e-13,361;CL:0000738,2.00e-11,136;CL:0000219,2.62e-11,386;CL:0000860,1.05e-10,42;CL:0002057,1.05e-10,42;CL:0000766,1.13e-10,72;CL:0000988,4.62e-10,177;CL:0000037,5.84e-10,168;CL:0000473,3.82e-09,48;CL:0000234,3.82e-09,48;CL:0002032,5.90e-09,161;CL:0000837,5.90e-09,161;CL:0000557,7.16e-09,67;CL:0002031,1.82e-08,120;CL:0000763,2.82e-08,108;CL:0000049,2.82e-08,108;CL:0002009,4.04e-08,61;CL:0000839,5.33e-08,66;CL:0002087,8.87e-08,115;CL:0002194,2.24e-07,59;CL:0000576,2.24e-07,59;CL:0000040,2.24e-07,59;CL:0000559,2.24e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.27e-12!375;UBERON:0004765!8.46e-09!101;UBERON:0001434!8.46e-09!101;UBERON:0002371!1.38e-08!80;UBERON:0001474!1.46e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.89e-12,371;UBERON:0002371,1.29e-08,76;UBERON:0001474,1.44e-08,82;UBERON:0004765,2.84e-08,90;UBERON:0001434,9.07e-08,100;UBERON:0002405,3.50e-07,93 | |||
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| ||
|short_description=p2@HIAT1 | |||
}} | }} |
Latest revision as of 03:48, 25 September 2015
Short description: | p2@HIAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIAT1_5end |
Coexpression cluster: | C878_Preadipocyte_Adipocyte_Mast_CD14_CD8_CD4_Fibroblast |
Association with transcript: | 29bp_to_ENST00000370152_5end |
EntrezGene: | HIAT1 |
HGNC: | 23363 |
UniProt: | Q96MC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.00e-17 | 433 |
multi fate stem cell | 4.54e-17 | 427 |
stem cell | 9.00e-17 | 441 |
mesenchymal cell | 1.29e-14 | 354 |
connective tissue cell | 3.31e-13 | 361 |
leukocyte | 2.00e-11 | 136 |
motile cell | 2.62e-11 | 386 |
classical monocyte | 1.05e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-10 | 42 |
myeloid leukocyte | 1.13e-10 | 72 |
hematopoietic cell | 4.62e-10 | 177 |
hematopoietic stem cell | 5.84e-10 | 168 |
defensive cell | 3.82e-09 | 48 |
phagocyte | 3.82e-09 | 48 |
hematopoietic oligopotent progenitor cell | 5.90e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.90e-09 | 161 |
granulocyte monocyte progenitor cell | 7.16e-09 | 67 |
hematopoietic lineage restricted progenitor cell | 1.82e-08 | 120 |
myeloid cell | 2.82e-08 | 108 |
common myeloid progenitor | 2.82e-08 | 108 |
macrophage dendritic cell progenitor | 4.04e-08 | 61 |
myeloid lineage restricted progenitor cell | 5.33e-08 | 66 |
nongranular leukocyte | 8.87e-08 | 115 |
monopoietic cell | 2.24e-07 | 59 |
monocyte | 2.24e-07 | 59 |
monoblast | 2.24e-07 | 59 |
promonocyte | 2.24e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.89e-12 | 371 |
bone marrow | 1.29e-08 | 76 |
bone element | 1.44e-08 | 82 |
skeletal element | 2.84e-08 | 90 |
skeletal system | 9.07e-08 | 100 |
immune system | 3.50e-07 | 93 |