FFCP PHASE1:Hg19::chr5:140718320..140718343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=56113 | |EntrezGene=56113 | ||
Line 8: | Line 8: | ||
|UniProt=Q9Y5H1 | |UniProt=Q9Y5H1 | ||
|association_with_transcript=-10bp_to_NM_018915,NM_032009,uc003ljk.1,uc011dao.1_5end | |association_with_transcript=-10bp_to_NM_018915,NM_032009,uc003ljk.1,uc011dao.1_5end | ||
|cluster_id=chr5:140718320..140718343,+ | |||
|description=CAGE_peak_1_at_PCDHGA2_5end | |description=CAGE_peak_1_at_PCDHGA2_5end | ||
|id=chr5:140718320..140718343,+ | |id=chr5:140718320..140718343,+ |
Latest revision as of 03:55, 25 September 2015
Short description: | p1@PCDHGA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_018915, NM_032009, uc003ljk.1, uc011dao.1_5end |
EntrezGene: | PCDHGA2 |
HGNC: | 8700 |
UniProt: | Q9Y5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PCDHGA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.35e-08 | 43 |
smooth muscle myoblast | 2.35e-08 | 43 |
muscle precursor cell | 1.97e-07 | 58 |
myoblast | 1.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.97e-07 | 58 |
vascular associated smooth muscle cell | 2.69e-07 | 32 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 2.02e-18 | 56 |
neural rod | 2.02e-18 | 56 |
future spinal cord | 2.02e-18 | 56 |
neural keel | 2.02e-18 | 56 |
adult organism | 1.33e-17 | 114 |
regional part of nervous system | 1.30e-16 | 53 |
regional part of brain | 1.30e-16 | 53 |
neural plate | 4.06e-15 | 82 |
presumptive neural plate | 4.06e-15 | 82 |
central nervous system | 4.09e-15 | 81 |
Showing 1 to 10 of 46 entries