FFCP PHASE1:Hg19::chrX:46404975..46405023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401588 | |EntrezGene=401588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_uc004dgs.3_5end | |association_with_transcript=18bp_to_uc004dgs.3_5end | ||
|cluster_id=chrX:46404975..46405023,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_LOC401588_5end | |description=CAGE_peak_2_at_LOC401588_5end | ||
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|ontology_enrichment_celltype=CL:0000034!3.36e-30!444;CL:0000048!1.17e-28!430;CL:0000723!6.31e-28!436;CL:0000144!2.58e-25!625;CL:0000012!8.78e-25!682;CL:0000134!1.84e-24!358;CL:0000219!2.11e-24!390;CL:0000548!1.20e-23!679;CL:0000004!1.20e-23!679;CL:0000255!1.20e-23!679;CL:0002320!7.82e-23!365;CL:0000003!2.94e-22!722;CL:0002371!4.60e-22!591;CL:0002057!4.60e-20!42;CL:0000860!1.11e-18!45;CL:0000063!7.10e-16!578;CL:0000738!1.05e-11!140;CL:0000766!5.81e-11!76;CL:0000055!2.04e-10!180;CL:0002087!2.22e-09!119;CL:0000057!5.86e-09!75;CL:0002009!2.17e-08!65;CL:0002031!3.70e-08!124;CL:0002194!5.37e-08!63;CL:0000576!5.37e-08!63;CL:0000040!5.37e-08!63;CL:0000559!5.37e-08!63;CL:0000557!2.16e-07!71;CL:0000081!3.66e-07!11;CL:0000839!5.41e-07!70;CL:0000037!8.21e-07!172;CL:0000566!8.21e-07!172;CL:0000094!9.22e-07!8 | |ontology_enrichment_celltype=CL:0000034!3.36e-30!444;CL:0000048!1.17e-28!430;CL:0000723!6.31e-28!436;CL:0000144!2.58e-25!625;CL:0000012!8.78e-25!682;CL:0000134!1.84e-24!358;CL:0000219!2.11e-24!390;CL:0000548!1.20e-23!679;CL:0000004!1.20e-23!679;CL:0000255!1.20e-23!679;CL:0002320!7.82e-23!365;CL:0000003!2.94e-22!722;CL:0002371!4.60e-22!591;CL:0002057!4.60e-20!42;CL:0000860!1.11e-18!45;CL:0000063!7.10e-16!578;CL:0000738!1.05e-11!140;CL:0000766!5.81e-11!76;CL:0000055!2.04e-10!180;CL:0002087!2.22e-09!119;CL:0000057!5.86e-09!75;CL:0002009!2.17e-08!65;CL:0002031!3.70e-08!124;CL:0002194!5.37e-08!63;CL:0000576!5.37e-08!63;CL:0000040!5.37e-08!63;CL:0000559!5.37e-08!63;CL:0000557!2.16e-07!71;CL:0000081!3.66e-07!11;CL:0000839!5.41e-07!70;CL:0000037!8.21e-07!172;CL:0000566!8.21e-07!172;CL:0000094!9.22e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-18;33!CL:0002057;3.80e-18;33!CL:0000576;1.86e-12;48!CL:0000473;3.94e-11;39!CL:0000234;3.94e-11;39!CL:0000766;6.81e-10;69!CL:0000094;2.13e-09;8!CL:0000081;4.54e-09;11 | |ontology_enrichment_celltype_v019=CL:0000860;3.80e-18;33!CL:0002057;3.80e-18;33!CL:0000576;1.86e-12;48!CL:0000473;3.94e-11;39!CL:0000234;3.94e-11;39!CL:0000766;6.81e-10;69!CL:0000094;2.13e-09;8!CL:0000081;4.54e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.36e-26,441;CL:0000134,1.25e-24,354;CL:0000048,1.46e-24,427;CL:0000860,2.63e-24,42;CL:0002057,2.63e-24,42;CL:0000723,5.50e-24,433;CL:0002320,3.69e-23,361;CL:0000219,2.02e-22,386;CL:0000473,2.29e-19,48;CL:0000234,2.29e-19,48;CL:0000766,3.69e-18,72;CL:0000738,2.03e-16,136;CL:0002009,9.81e-14,61;CL:0002194,1.65e-13,59;CL:0000576,1.65e-13,59;CL:0000040,1.65e-13,59;CL:0000559,1.65e-13,59;CL:0002087,5.52e-13,115;CL:0000557,2.73e-12,67;CL:0000839,1.14e-11,66;CL:0002031,5.68e-11,120;CL:0000037,6.74e-10,168;CL:0000094,1.98e-09,8;CL:0000988,3.28e-09,177;CL:0000081,7.26e-09,11;CL:0002032,7.41e-09,161;CL:0000837,7.41e-09,161;CL:0000763,1.79e-08,108;CL:0000049,1.79e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-18;42 | |ontology_enrichment_development_v019=CL:0002057;3.26e-18;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.68e-22!375;UBERON:0001474!5.45e-08!86;UBERON:0002371!1.38e-07!80;UBERON:0002390!3.79e-07!102;UBERON:0003061!3.79e-07!102 | |ontology_enrichment_uberon=UBERON:0002384!5.68e-22!375;UBERON:0001474!5.45e-08!86;UBERON:0002371!1.38e-07!80;UBERON:0002390!3.79e-07!102;UBERON:0003061!3.79e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.56e-22,371;UBERON:0001474,6.52e-13,82;UBERON:0002371,6.81e-13,76;UBERON:0002390,4.04e-11,98;UBERON:0003061,4.04e-11,98;UBERON:0004765,2.07e-10,90;UBERON:0002405,3.58e-10,93;UBERON:0002193,4.04e-10,108;UBERON:0001434,2.11e-08,100 | |||
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|short_description=p2@LOC401588 | |short_description=p2@LOC401588 | ||
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Latest revision as of 04:43, 25 September 2015
Short description: | p2@LOC401588 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC401588_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 18bp_to_uc004dgs.3_5end |
EntrezGene: | LOC401588 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.36e-26 | 441 |
mesenchymal cell | 1.25e-24 | 354 |
multi fate stem cell | 1.46e-24 | 427 |
classical monocyte | 2.63e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-24 | 42 |
somatic stem cell | 5.50e-24 | 433 |
connective tissue cell | 3.69e-23 | 361 |
motile cell | 2.02e-22 | 386 |
defensive cell | 2.29e-19 | 48 |
phagocyte | 2.29e-19 | 48 |
myeloid leukocyte | 3.69e-18 | 72 |
leukocyte | 2.03e-16 | 136 |
macrophage dendritic cell progenitor | 9.81e-14 | 61 |
monopoietic cell | 1.65e-13 | 59 |
monocyte | 1.65e-13 | 59 |
monoblast | 1.65e-13 | 59 |
promonocyte | 1.65e-13 | 59 |
nongranular leukocyte | 5.52e-13 | 115 |
granulocyte monocyte progenitor cell | 2.73e-12 | 67 |
myeloid lineage restricted progenitor cell | 1.14e-11 | 66 |
hematopoietic lineage restricted progenitor cell | 5.68e-11 | 120 |
hematopoietic stem cell | 6.74e-10 | 168 |
granulocyte | 1.98e-09 | 8 |
hematopoietic cell | 3.28e-09 | 177 |
blood cell | 7.26e-09 | 11 |
hematopoietic oligopotent progenitor cell | 7.41e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-09 | 161 |
myeloid cell | 1.79e-08 | 108 |
common myeloid progenitor | 1.79e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.56e-22 | 371 |
bone element | 6.52e-13 | 82 |
bone marrow | 6.81e-13 | 76 |
hematopoietic system | 4.04e-11 | 98 |
blood island | 4.04e-11 | 98 |
skeletal element | 2.07e-10 | 90 |
immune system | 3.58e-10 | 93 |
hemolymphoid system | 4.04e-10 | 108 |
skeletal system | 2.11e-08 | 100 |