FFCP PHASE1:Hg19::chr22:46663875..46663886,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:46663875..46663886,+
|short_description=p2@TTC38
|description=CAGE_peak_2_at_TTC38_5end
|association_with_transcript=0bp_to_ENST00000445282_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55020 | |EntrezGene=55020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26082 | |HGNC=26082 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES35 | |UniProt=E7ES35 | ||
|association_with_transcript=0bp_to_ENST00000445282_5end | |||
|cluster_id=chr22:46663875..46663886,+ | |||
|description=CAGE_peak_2_at_TTC38_5end | |||
|id=chr22:46663875..46663886,+ | |||
|ontology_enrichment_celltype=CL:0000183!3.36e-15!59;CL:0000187!1.51e-12!54;CL:0000680!6.88e-12!57;CL:0000056!6.88e-12!57;CL:0000355!6.88e-12!57;CL:0000393!2.90e-11!60;CL:0000211!2.90e-11!60;CL:0000192!6.89e-11!42;CL:0000514!6.89e-11!42;CL:0000055!1.48e-09!180;CL:0000222!3.38e-09!119;CL:0000359!1.14e-07!32;CL:1000449!2.24e-07!16;CL:0002371!3.89e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.25e-08;43!CL:0000187;3.47e-08;55!CL:0000359;1.65e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,8.75e-14,55;CL:0000680,4.54e-13,58;CL:0000056,4.54e-13,58;CL:0000355,4.54e-13,58;CL:0000192,3.84e-12,43;CL:0000514,3.84e-12,43;CL:0000393,4.32e-12,61;CL:0000211,4.32e-12,61;CL:0000222,2.37e-10,121;CL:0000359,3.19e-08,32;CL:1000449,8.70e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-08;43!CL:0000355;1.82e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.22e-15!70;UBERON:0000486!1.12e-14!82;UBERON:0000914!3.10e-14!83;UBERON:0002329!3.10e-14!83;UBERON:0003077!3.10e-14!83;UBERON:0003059!3.10e-14!83;UBERON:0007282!3.10e-14!83;UBERON:0009618!3.10e-14!83;UBERON:0007285!3.10e-14!83;UBERON:0001134!8.40e-13!61;UBERON:0002036!8.40e-13!61;UBERON:0003082!8.40e-13!61;UBERON:0005256!2.93e-12!143;UBERON:0002385!5.10e-12!63;UBERON:0001015!5.10e-12!63;UBERON:0000383!5.10e-12!63;UBERON:0003104!2.29e-09!238;UBERON:0009142!2.29e-09!238;UBERON:0000481!6.76e-09!347;UBERON:0000119!1.10e-08!312;UBERON:0002049!1.77e-08!79;UBERON:0007798!1.77e-08!79;UBERON:0003914!3.33e-08!118;UBERON:0000483!5.37e-08!309;UBERON:0002100!6.24e-08!216;UBERON:0002113!7.41e-08!27;UBERON:0003918!7.41e-08!27;UBERON:0005095!7.41e-08!27;UBERON:0007687!7.41e-08!27;UBERON:0000490!1.05e-07!138;UBERON:0004211!2.24e-07!16;UBERON:0001285!2.24e-07!16;UBERON:0007684!2.24e-07!16;UBERON:0003220!2.24e-07!16;UBERON:0004208!2.24e-07!16;UBERON:0001981!2.79e-07!60;UBERON:0007500!2.79e-07!60;UBERON:0004537!2.79e-07!60;UBERON:0006965!2.79e-07!60;UBERON:0006555!4.08e-07!17;UBERON:0005103!4.08e-07!17;UBERON:0000083!4.08e-07!17;UBERON:0009201!4.08e-07!17;UBERON:0004819!4.08e-07!17;UBERON:0006553!4.08e-07!17;UBERON:0003074!4.08e-07!17;UBERON:0003060!4.08e-07!17;UBERON:0000055!7.84e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.66e-07;24!UBERON:0011143;1.66e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.61e-20,78;UBERON:0002329,9.23e-17,71;UBERON:0003059,9.23e-17,71;UBERON:0007282,9.23e-17,71;UBERON:0004290,9.23e-17,71;UBERON:0009618,9.23e-17,71;UBERON:0007524,1.59e-16,73;UBERON:0003077,1.94e-16,72;UBERON:0007285,1.94e-16,72;UBERON:0000486,2.95e-16,83;UBERON:0003104,2.64e-15,160;UBERON:0009142,2.64e-15,160;UBERON:0001134,4.93e-14,62;UBERON:0002036,4.93e-14,62;UBERON:0003082,4.93e-14,62;UBERON:0002385,9.53e-13,64;UBERON:0001015,9.53e-13,64;UBERON:0000383,9.53e-13,64;UBERON:0005256,8.50e-12,122;UBERON:0000490,1.32e-10,148;UBERON:0000119,7.96e-10,309;UBERON:0000483,4.57e-09,306;UBERON:0002100,1.52e-08,199;UBERON:0002049,1.92e-08,78;UBERON:0007798,1.92e-08,78;UBERON:0003914,2.47e-08,117;UBERON:0002113,3.07e-07,26;UBERON:0003918,3.07e-07,26;UBERON:0011143,3.07e-07,26;UBERON:0005095,3.07e-07,26;UBERON:0007687,3.07e-07,26;UBERON:0007500,4.03e-07,59;UBERON:0001981,4.03e-07,59;UBERON:0004537,4.03e-07,59;UBERON:0006965,4.03e-07,59;UBERON:0004211,8.70e-07,15;UBERON:0009773,8.70e-07,15;UBERON:0001231,8.70e-07,15;UBERON:0001285,8.70e-07,15;UBERON:0007684,8.70e-07,15;UBERON:0004208,8.70e-07,15;UBERON:0000055,9.71e-07,68 | |||
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| ||
|short_description=p2@TTC38 | |||
}} | }} |
Latest revision as of 05:27, 25 September 2015
Short description: | p2@TTC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000445282_5end |
EntrezGene: | TTC38 |
HGNC: | 26082 |
UniProt: | E7ES35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 8.75e-14 | 55 |
muscle precursor cell | 4.54e-13 | 58 |
myoblast | 4.54e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.54e-13 | 58 |
smooth muscle cell | 3.84e-12 | 43 |
smooth muscle myoblast | 3.84e-12 | 43 |
electrically responsive cell | 4.32e-12 | 61 |
electrically active cell | 4.32e-12 | 61 |
mesodermal cell | 2.37e-10 | 121 |
vascular associated smooth muscle cell | 3.19e-08 | 32 |
epithelial cell of nephron | 8.70e-07 | 15 |