FFCP PHASE1:Hg19::chr17:46670037..46670060,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3215 | |EntrezGene=3215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5116 | |HGNC=5116 | ||
|TSSclassifier=strong | |||
|UniProt=P09067 | |UniProt=P09067 | ||
|association_with_transcript=-254bp_to_X03794_5end | |association_with_transcript=-254bp_to_X03794_5end | ||
|cluster_id=chr17:46670037..46670060,- | |||
|description=CAGE_peak_3_at_HOXB5_5end | |description=CAGE_peak_3_at_HOXB5_5end | ||
|id=chr17:46670037..46670060,- | |id=chr17:46670037..46670060,- | ||
|ontology_enrichment_celltype=CL:0002334!2.90e-13!12 | |ontology_enrichment_celltype=CL:0002334!2.90e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0002554;3.08e-14;2!CL:0002600;3.08e-14;2!CL:0000632;3.90e-10;3!CL:0002579;8.55e-10;3!CL:0002591;5.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.57e-14,2;CL:0002600,2.21e-14,2;CL:0000632,4.58e-10,3;CL:0002579,1.07e-09,3;CL:0002591,9.29e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.56e-10;3!UBERON:0003057;4.56e-10;3!UBERON:0005425;5.77e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.60e-13!113;UBERON:0003076!6.39e-10!15;UBERON:0003057!6.39e-10!15;UBERON:0005177!9.33e-10!107;UBERON:0000466!3.75e-09!126;UBERON:0000464!5.14e-09!104;UBERON:0002100!9.57e-09!216;UBERON:0002417!3.84e-08!61;UBERON:0000916!3.84e-08!61;UBERON:0004732!1.87e-07!13;UBERON:0004457!3.57e-07!12;UBERON:0000042!3.57e-07!12;UBERON:0003688!4.67e-07!6;UBERON:0002358!4.67e-07!6;UBERON:0003684!4.67e-07!6;UBERON:0001178!4.67e-07!6;UBERON:0000489!5.31e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.03e-10;6!UBERON:0002358;1.03e-10;6!UBERON:0003684;1.03e-10;6!UBERON:0001178;1.03e-10;6!UBERON:0002240;4.56e-10;3!UBERON:0005174;4.56e-10;3!UBERON:0001137;4.56e-10;3!UBERON:0000941;5.77e-08;1!UBERON:0001785;5.77e-08;1!UBERON:0002464;5.77e-08;1!UBERON:0004904;5.77e-08;1!UBERON:0001021;5.77e-08;1!UBERON:0004457;2.70e-07;9!UBERON:0000042;2.70e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.22e-10,6;UBERON:0002358,1.22e-10,6;UBERON:0003684,1.22e-10,6;UBERON:0001178,1.22e-10,6;UBERON:0002240,6.28e-10,3;UBERON:0005174,6.28e-10,3;UBERON:0001137,6.28e-10,3;UBERON:0009569,5.88e-09,112;UBERON:0000941,5.79e-08,1;UBERON:0001785,5.79e-08,1;UBERON:0002464,5.79e-08,1;UBERON:0004904,5.79e-08,1;UBERON:0001021,5.79e-08,1;UBERON:0003902,5.79e-08,1;UBERON:0005425,5.79e-08,1 | |||
|phase1_expression=0,0.642301571672949,2.25527046553554,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,0,0.994192127183747,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.469737994575059,0.485618833104395,0.561803226808994,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.779496041289589,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,2.76269842704961,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0.257207374262142,0,0,1.57275793023962,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,1.66580894032411,1.02341449813341,0.64341568457443,0,0.925258162815933,0.177561725313127,0.739144404124282,0.519254429183621,0.697262270759755,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,0,0,0,0,0,0,0,0,0,0.571890581771475,0.767693373934002,4.70732886837312,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,2.2054613741845,0,0,1.73632660280006,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.472091293214983,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.06787412567695,0.943225830597996,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,1.80079568530012,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,1.10961172300523,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0.829412415681711,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.40781839786099,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0.846774100381858,0,0.62041277132864,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0.617393264863557,0.437119121007915,0.470317296361523,0,0.707029641304878,0.981542335574726,1.18818560130834,2.113278637917,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0.642301571672949,2.25527046553554,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,0,0.994192127183747,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.469737994575059,0.485618833104395,0.561803226808994,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.779496041289589,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,2.76269842704961,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0.257207374262142,0,0,1.57275793023962,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,1.66580894032411,1.02341449813341,0.64341568457443,0,0.925258162815933,0.177561725313127,0.739144404124282,0.519254429183621,0.697262270759755,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85938219718914,0,0,0,0,0,0,0,0,0,0.571890581771475,0.767693373934002,4.70732886837312,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,1.13008116620243,2.2054613741845,0,0,1.73632660280006,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.472091293214983,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.06787412567695,0.943225830597996,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,1.80079568530012,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,1.10961172300523,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0.829412415681711,0.53168342911599,0.521745061811734,0,0,0.406870733204662,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.40781839786099,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0.846774100381858,0,0.62041277132864,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0.617393264863557,0.437119121007915,0.470317296361523,0,0.707029641304878,0.981542335574726,1.18818560130834,2.113278637917,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p3@HOXB5 | |short_description=p3@HOXB5 | ||
}} | }} |
Latest revision as of 07:07, 25 September 2015
Short description: | p3@HOXB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -254bp_to_X03794_5end |
EntrezGene: | HOXB5 |
HGNC: | 5116 |
UniProt: | P09067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.57e-14 | 2 |
smooth muscle cell of trachea | 2.21e-14 | 2 |
hepatic stellate cell | 4.58e-10 | 3 |
omentum preadipocyte | 1.07e-09 | 3 |
smooth muscle cell of the pulmonary artery | 9.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.22e-10 | 6 |
peritoneum | 1.22e-10 | 6 |
abdominal cavity | 1.22e-10 | 6 |
visceral peritoneum | 1.22e-10 | 6 |
spinal cord | 6.28e-10 | 3 |
dorsal region element | 6.28e-10 | 3 |
dorsum | 6.28e-10 | 3 |
subdivision of trunk | 5.88e-09 | 112 |
cranial nerve II | 5.79e-08 | 1 |
cranial nerve | 5.79e-08 | 1 |
nerve trunk | 5.79e-08 | 1 |
nerve connecting eye with brain | 5.79e-08 | 1 |
nerve | 5.79e-08 | 1 |
retinal neural layer | 5.79e-08 | 1 |
presumptive neural retina | 5.79e-08 | 1 |