FFCP PHASE1:Hg19::chr17:4675175..4675192,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9032 | |EntrezGene=9032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11857 | |HGNC=11857 | ||
|TSSclassifier=strong | |||
|UniProt=O14894 | |UniProt=O14894 | ||
|association_with_transcript=0bp_to_ENST00000270560,NM_003963,uc002fyw.1_5end | |association_with_transcript=0bp_to_ENST00000270560,NM_003963,uc002fyw.1_5end | ||
|cluster_id=chr17:4675175..4675192,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_TM4SF5_5end | |description=CAGE_peak_1_at_TM4SF5_5end | ||
|id=chr17:4675175..4675192,+ | |id=chr17:4675175..4675192,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.28e-18!12;CL:0000417!4.28e-18!12;CL:0000668!4.28e-18!12;CL:0000414!4.28e-18!12;CL:0000412!4.28e-18!12;CL:0000182!4.28e-18!12;CL:0000223!2.26e-08!59 | |ontology_enrichment_celltype=CL:0000181!4.28e-18!12;CL:0000417!4.28e-18!12;CL:0000668!4.28e-18!12;CL:0000414!4.28e-18!12;CL:0000412!4.28e-18!12;CL:0000182!4.28e-18!12;CL:0000223!2.26e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.93e-27,12;CL:0000223,1.59e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.12e-29;11!UBERON:0009497;6.35e-25;13!UBERON:0003104;2.32e-21;31!UBERON:0001041;4.64e-10;30!CL:0000223;6.88e-08;58!UBERON:0006595;1.79e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.19e-07!106;DOID:3493!1.22e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!7.08e-28!25;UBERON:0000015!7.08e-28!25;UBERON:0002423!7.08e-28!25;UBERON:0006235!7.08e-28!25;UBERON:0004161!7.08e-28!25;UBERON:0009854!1.40e-26!23;UBERON:0008835!4.20e-24!22;UBERON:0003894!4.20e-24!22;UBERON:0004921!1.62e-23!129;UBERON:0004185!1.62e-23!129;UBERON:0005409!2.33e-23!35;UBERON:0009856!4.16e-23!26;UBERON:0001007!7.66e-21!155;UBERON:0001555!7.66e-21!155;UBERON:0007026!7.66e-21!155;UBERON:0007499!7.90e-21!25;UBERON:0002107!1.08e-20!19;UBERON:0006925!1.08e-20!19;UBERON:0008836!1.08e-20!19;UBERON:0004119!1.21e-19!169;UBERON:0000925!1.21e-19!169;UBERON:0006595!1.21e-19!169;UBERON:0003929!2.61e-18!54;UBERON:0000160!4.46e-18!27;UBERON:0005057!4.02e-17!26;UBERON:0000077!4.63e-17!130;UBERON:0005172!7.56e-16!55;UBERON:0005173!7.56e-16!55;UBERON:0000059!1.83e-14!11;UBERON:0002417!7.61e-14!61;UBERON:0000916!7.61e-14!61;UBERON:0005911!8.56e-12!82;UBERON:0002365!1.04e-11!31;UBERON:0002330!1.04e-11!31;UBERON:0001041!3.03e-11!98;UBERON:0005177!5.05e-11!107;UBERON:0004907!5.80e-11!5;UBERON:0000949!2.29e-10!45;UBERON:0002368!4.28e-10!35;UBERON:0001155!1.61e-09!9;UBERON:0000481!4.16e-09!347;UBERON:0001052!3.46e-08!4;UBERON:0009569!4.20e-08!113;UBERON:0003104!5.98e-08!238;UBERON:0009142!5.98e-08!238;UBERON:0000466!1.39e-07!126;UBERON:0002294!1.65e-07!7;UBERON:0001173!1.65e-07!7;UBERON:0004912!1.65e-07!7;UBERON:0002530!3.61e-07!59;UBERON:0000945!9.78e-07!8;UBERON:0010039!9.78e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.43e-30;22!UBERON:0000160;3.76e-27;17!UBERON:0002107;1.87e-26;19!UBERON:0006925;1.87e-26;19!UBERON:0002423;7.86e-24;25!UBERON:0004921;4.29e-17;33!UBERON:0000059;2.99e-16;11!UBERON:0002365;3.98e-15;31!UBERON:0002330;3.98e-15;31!UBERON:0001155;3.85e-14;9!UBERON:0002368;3.73e-13;33!UBERON:0001007;3.81e-12;81!UBERON:0000949;2.18e-11;43!UBERON:0002108;2.39e-10;4!UBERON:0004907;1.48e-09;5!UBERON:0005172;3.21e-09;52!UBERON:0005173;3.21e-09;52!UBERON:0002417;5.22e-07;58!UBERON:0000916;5.22e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-27,17;UBERON:0002107,1.89e-26,19;UBERON:0006925,1.89e-26,19;UBERON:0008836,1.89e-26,19;UBERON:0005409,2.66e-26,25;UBERON:0009854,7.99e-26,23;UBERON:0009497,7.94e-24,25;UBERON:0000015,7.94e-24,25;UBERON:0002423,7.94e-24,25;UBERON:0006235,7.94e-24,25;UBERON:0004161,7.94e-24,25;UBERON:0009856,1.36e-22,26;UBERON:0008835,1.39e-22,22;UBERON:0003894,1.39e-22,22;UBERON:0004921,5.42e-22,118;UBERON:0007499,1.20e-19,25;UBERON:0001007,1.41e-18,145;UBERON:0001555,1.41e-18,145;UBERON:0007026,1.41e-18,145;UBERON:0004119,2.57e-16,160;UBERON:0000925,2.57e-16,160;UBERON:0006595,2.57e-16,160;UBERON:0003929,2.88e-16,54;UBERON:0000059,3.04e-16,11;UBERON:0002365,1.78e-15,31;UBERON:0002330,1.78e-15,31;UBERON:0000949,1.74e-14,45;UBERON:0001155,3.91e-14,9;UBERON:0005172,7.92e-14,54;UBERON:0005173,7.92e-14,54;UBERON:0002368,1.72e-13,35;UBERON:0002417,3.57e-12,60;UBERON:0000916,3.57e-12,60;UBERON:0005911,2.83e-11,82;UBERON:0005177,3.85e-11,101;UBERON:0002108,2.43e-10,4;UBERON:0011216,6.06e-10,223;UBERON:0004907,1.53e-09,5;UBERON:0001041,6.89e-09,87;UBERON:0002530,8.48e-09,59;UBERON:0009569,2.52e-07,112 | |||
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| ||
|short_description=p1@TM4SF5 | |short_description=p1@TM4SF5 | ||
}} | }} |
Latest revision as of 07:40, 25 September 2015
Short description: | p1@TM4SF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TM4SF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000270560, NM_003963, uc002fyw.1_5end |
EntrezGene: | TM4SF5 |
HGNC: | 11857 |
UniProt: | O14894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.93e-27 | 12 |
endodermal cell | 1.59e-12 | 58 |