FFCP PHASE1:Hg19::chr5:142784003..142784065,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:142784003..142784065,- to FFCP PHASE1:Hg19::chr5:142784003..142784065,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7I2,F1D8N4,P04150 | |UniProt=B7Z7I2,F1D8N4,P04150 | ||
|association_with_transcript=0bp_to_ENST00000416954,NM_001018076,uc003lnb.2,uc011dbk.1_5end | |||
|cluster_id=chr5:142784003..142784065,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_2_at_NR3C1_5end | |||
|id=chr5:142784003..142784065,- | |||
|ontology_enrichment_celltype=CL:0000738!2.56e-41!140;CL:0000766!3.66e-35!76;CL:0002087!4.97e-35!119;CL:0002031!5.18e-34!124;CL:0000557!7.86e-31!71;CL:0000037!4.00e-29!172;CL:0000566!4.00e-29!172;CL:0002009!4.23e-29!65;CL:0002194!1.09e-28!63;CL:0000576!1.09e-28!63;CL:0000040!1.09e-28!63;CL:0000559!1.09e-28!63;CL:0000839!1.45e-27!70;CL:0002032!1.77e-26!165;CL:0000837!1.77e-26!165;CL:0000988!8.20e-26!182;CL:0002057!7.05e-25!42;CL:0000860!1.06e-24!45;CL:0000763!5.24e-19!112;CL:0000049!5.24e-19!112;CL:0000134!8.42e-19!358;CL:0002320!1.41e-18!365;CL:0000219!9.02e-13!390;CL:0000048!3.91e-10!430;CL:0000723!2.86e-09!436;CL:0000034!2.70e-08!444;CL:0000838!1.21e-07!52;CL:0000542!2.91e-07!53;CL:0000051!2.91e-07!53;CL:0002393!9.41e-07!9;CL:0002397!9.41e-07!9;CL:0000094!9.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.22e-18;33!CL:0002057;7.22e-18;33!CL:0000473;1.78e-16;39!CL:0000234;1.78e-16;39!CL:0000576;4.83e-16;48!CL:0000766;8.91e-15;69!CL:0002087;8.60e-10;104!CL:0000738;5.60e-09;136!CL:0000094;8.86e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-40,136;CL:0000766,6.80e-35,72;CL:0002087,1.89e-34,115;CL:0002031,2.09e-33,120;CL:0000557,1.56e-30,67;CL:0002009,7.74e-29,61;CL:0000037,1.89e-28,168;CL:0002194,1.91e-28,59;CL:0000576,1.91e-28,59;CL:0000040,1.91e-28,59;CL:0000559,1.91e-28,59;CL:0000839,3.28e-27,66;CL:0000473,2.15e-26,48;CL:0000234,2.15e-26,48;CL:0002032,8.03e-26,161;CL:0000837,8.03e-26,161;CL:0000988,8.69e-26,177;CL:0000860,6.93e-25,42;CL:0002057,6.93e-25,42;CL:0000134,8.68e-19,354;CL:0002320,1.47e-18,361;CL:0000763,1.97e-18,108;CL:0000049,1.97e-18,108;CL:0000219,1.03e-12,386;CL:0000048,4.59e-10,427;CL:0000723,3.34e-09,433;CL:0000034,3.31e-08,441;CL:0000838,1.21e-07,52;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53;CL:0002393,9.37e-07,9;CL:0002397,9.37e-07,9;CL:0000094,9.38e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.86e-34!102;UBERON:0003061!5.86e-34!102;UBERON:0002193!9.38e-28!112;UBERON:0002371!3.95e-27!80;UBERON:0001474!3.79e-25!86;UBERON:0004765!1.84e-23!101;UBERON:0001434!1.84e-23!101;UBERON:0002384!1.01e-18!375;UBERON:0002405!6.86e-16!115;UBERON:0002204!3.88e-13!167;UBERON:0003081!3.91e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.88e-33,98;UBERON:0003061,1.88e-33,98;UBERON:0002193,3.39e-27,108;UBERON:0002371,1.11e-26,76;UBERON:0001474,1.22e-24,82;UBERON:0001434,4.80e-23,100;UBERON:0004765,1.21e-22,90;UBERON:0002405,3.26e-22,93;UBERON:0002384,1.03e-18,371;UBERON:0002204,8.62e-13,167;UBERON:0003081,8.72e-09,203 | |||
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| ||
|short_description=p2@NR3C1 | |||
}} | }} |
Latest revision as of 07:42, 25 September 2015
Short description: | p2@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR3C1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000416954, NM_001018076, uc003lnb.2, uc011dbk.1_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B7Z7I2F1D8N4P04150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.88e-33 | 98 |
blood island | 1.88e-33 | 98 |
hemolymphoid system | 3.39e-27 | 108 |
bone marrow | 1.11e-26 | 76 |
bone element | 1.22e-24 | 82 |
skeletal system | 4.80e-23 | 100 |
skeletal element | 1.21e-22 | 90 |
immune system | 3.26e-22 | 93 |
connective tissue | 1.03e-18 | 371 |
musculoskeletal system | 8.62e-13 | 167 |
lateral plate mesoderm | 8.72e-09 | 203 |