FFCP PHASE1:Mm9::chr14:21748422..21748427,+: Difference between revisions
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{{FFCP|EntrezGene=22330|HGNC=|UniProt=Q64727|association_with_transcript=-227bp_to_ENSMUST00000022369,NM_009502,uc007sky.1,uc007skz.1_5end|description=CAGE_peak_3_at_Vcl_5end|id=chr14:21748422..21748427,+|ontology_enrichment_celltype=CL:0000355!2.32e-08!9;CL:0002563!5.53e-07!9;CL:0002251!5.53e-07!9;CL:0000222!7.62e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,7.05e-19,6;CL:0000677,7.05e-19,6;CL:0000584,7.05e-19,6;CL:0000223,2.62e-16,20;CL:0000075,3.14e-16,7;CL:0000222,5.85e-16,7;CL:0000066,5.90e-13,25;CL:0002563,1.09e-12,9;CL:0002251,1.09e-12,9;CL:0000355,2.16e-12,9;CL:0002076,1.76e-11,15;CL:0000680,5.11e-11,6;CL:0000187,5.11e-11,6;CL:0000056,5.11e-11,6;CL:0000192,5.01e-10,3;CL:0000359,5.01e-10,3;CL:0002539,5.01e-10,3;CL:0000514,5.01e-10,3;CL:0002321,7.70e-09,70;CL:0000213,6.57e-08,1;CL:0002078,6.57e-08,1;CL:0000115,6.57e-08,1;CL:0002262,6.57e-08,1;CL:1000398,6.57e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!2.32e-08!9;UBERON:0002036!2.32e-08!9;UBERON:0002385!2.32e-08!9;UBERON:0000486!2.32e-08!9;UBERON:0001015!2.32e-08!9;UBERON:0004290!2.32e-08!9;UBERON:0003082!2.32e-08!9;UBERON:0002329!3.03e-07!11;UBERON:0003077!3.03e-07!11;UBERON:0003059!3.03e-07!11;UBERON:0007282!3.03e-07!11;UBERON:0009618!3.03e-07!11;UBERON:0007285!3.03e-07!11;UBERON:0000383!3.49e-07!10;UBERON:0003350!5.53e-07!9;UBERON:0004808!5.53e-07!9;UBERON:0001277!5.53e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.66e-13,5;UBERON:0007500,9.66e-13,5;UBERON:0001981,9.66e-13,5;UBERON:0002049,9.66e-13,5;UBERON:0007798,9.66e-13,5;UBERON:0004537,9.66e-13,5;UBERON:0006965,9.66e-13,5;UBERON:0003350,1.09e-12,9;UBERON:0004808,1.09e-12,9;UBERON:0001277,1.09e-12,9;UBERON:0001134,2.16e-12,9;UBERON:0002036,2.16e-12,9;UBERON:0002385,2.16e-12,9;UBERON:0000486,2.16e-12,9;UBERON:0007503,2.16e-12,9;UBERON:0001015,2.16e-12,9;UBERON:0002329,2.16e-12,9;UBERON:0003082,2.16e-12,9;UBERON:0003059,2.16e-12,9;UBERON:0007282,2.16e-12,9;UBERON:0004290,2.16e-12,9;UBERON:0009618,2.16e-12,9;UBERON:0000490,1.83e-11,66;UBERON:0000383,3.51e-11,10;UBERON:0000485,1.98e-10,11;UBERON:0007524,3.45e-10,11;UBERON:0003077,3.45e-10,11;UBERON:0007285,3.45e-10,11;UBERON:0001135,5.01e-10,3;UBERON:0004237,5.01e-10,3;UBERON:0004695,5.01e-10,3;UBERON:0002111,5.01e-10,3;UBERON:0004178,5.01e-10,3;UBERON:0001242,7.36e-09,13;UBERON:0001262,7.36e-09,13;UBERON:0004786,7.36e-09,13;UBERON:0002394,6.57e-08,1;UBERON:0001281,6.57e-08,1;UBERON:0000353,6.57e-08,1;UBERON:0003497,6.57e-08,1;UBERON:0003909,6.57e-08,1;UBERON:0003928,6.57e-08,1;UBERON:0003835,6.57e-08,1;UBERON:0003513,6.57e-08,1;UBERON:0001280,6.57e-08,1;UBERON:0004647,6.57e-08,1;UBERON:0002294,6.57e-08,1;UBERON:0001173,6.57e-08,1;UBERON:0004912,6.57e-08,1;UBERON:0005171,6.57e-08,1;UBERON:0000947,9.75e-08,4;UBERON:0001637,9.75e-08,4;UBERON:0004573,9.75e-08,4;UBERON:0003509,9.75e-08,4;UBERON:0004571,9.75e-08,4;UBERON:0010191,9.75e-08,4;UBERON:0004572,9.75e-08,4;UBERON:0000344,1.05e-07,15|phase1_expression=0,2.09385244583617,2.72999543633722,2.72217790176147,3.00537437967808,0.839396359559449,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.68822784320151,0,0.86152399231815,0.861884930743556,0,0.252030129759931,0,0,0,0,0.866554859253824,0,0.816677425049476,0.837063261473815,0.7813353445238,1.0470474879476,2.35292595212406,0,0.485510353031154,2.26614272356039,2.63580021170738,0.917733760808408,0,0,0.878744730937887,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,4.12537673821954,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.427115042397309,0,0.075726193333184,0.151143120213571,1.44932244350839,0,2.719885334831,0,0,0,0,0,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p3@Vcl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22330 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q64727 | |||
|association_with_transcript=-227bp_to_ENSMUST00000022369,NM_009502,uc007sky.1,uc007skz.1_5end | |||
|cluster_id=chr14:21748422..21748427,+ | |||
|description=CAGE_peak_3_at_Vcl_5end | |||
|id=chr14:21748422..21748427,+ | |||
|ontology_enrichment_celltype=CL:0000355!2.32e-08!9;CL:0002563!5.53e-07!9;CL:0002251!5.53e-07!9;CL:0000222!7.62e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.05e-19,6;CL:0000677,7.05e-19,6;CL:0000584,7.05e-19,6;CL:0000223,2.62e-16,20;CL:0000075,3.14e-16,7;CL:0000222,5.85e-16,7;CL:0000066,5.90e-13,25;CL:0002563,1.09e-12,9;CL:0002251,1.09e-12,9;CL:0000355,2.16e-12,9;CL:0002076,1.76e-11,15;CL:0000680,5.11e-11,6;CL:0000187,5.11e-11,6;CL:0000056,5.11e-11,6;CL:0000192,5.01e-10,3;CL:0000359,5.01e-10,3;CL:0002539,5.01e-10,3;CL:0000514,5.01e-10,3;CL:0002321,7.70e-09,70;CL:0000213,6.57e-08,1;CL:0002078,6.57e-08,1;CL:0000115,6.57e-08,1;CL:0002262,6.57e-08,1;CL:1000398,6.57e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.32e-08!9;UBERON:0002036!2.32e-08!9;UBERON:0002385!2.32e-08!9;UBERON:0000486!2.32e-08!9;UBERON:0001015!2.32e-08!9;UBERON:0004290!2.32e-08!9;UBERON:0003082!2.32e-08!9;UBERON:0002329!3.03e-07!11;UBERON:0003077!3.03e-07!11;UBERON:0003059!3.03e-07!11;UBERON:0007282!3.03e-07!11;UBERON:0009618!3.03e-07!11;UBERON:0007285!3.03e-07!11;UBERON:0000383!3.49e-07!10;UBERON:0003350!5.53e-07!9;UBERON:0004808!5.53e-07!9;UBERON:0001277!5.53e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,9.66e-13,5;UBERON:0007500,9.66e-13,5;UBERON:0001981,9.66e-13,5;UBERON:0002049,9.66e-13,5;UBERON:0007798,9.66e-13,5;UBERON:0004537,9.66e-13,5;UBERON:0006965,9.66e-13,5;UBERON:0003350,1.09e-12,9;UBERON:0004808,1.09e-12,9;UBERON:0001277,1.09e-12,9;UBERON:0001134,2.16e-12,9;UBERON:0002036,2.16e-12,9;UBERON:0002385,2.16e-12,9;UBERON:0000486,2.16e-12,9;UBERON:0007503,2.16e-12,9;UBERON:0001015,2.16e-12,9;UBERON:0002329,2.16e-12,9;UBERON:0003082,2.16e-12,9;UBERON:0003059,2.16e-12,9;UBERON:0007282,2.16e-12,9;UBERON:0004290,2.16e-12,9;UBERON:0009618,2.16e-12,9;UBERON:0000490,1.83e-11,66;UBERON:0000383,3.51e-11,10;UBERON:0000485,1.98e-10,11;UBERON:0007524,3.45e-10,11;UBERON:0003077,3.45e-10,11;UBERON:0007285,3.45e-10,11;UBERON:0001135,5.01e-10,3;UBERON:0004237,5.01e-10,3;UBERON:0004695,5.01e-10,3;UBERON:0002111,5.01e-10,3;UBERON:0004178,5.01e-10,3;UBERON:0001242,7.36e-09,13;UBERON:0001262,7.36e-09,13;UBERON:0004786,7.36e-09,13;UBERON:0002394,6.57e-08,1;UBERON:0001281,6.57e-08,1;UBERON:0000353,6.57e-08,1;UBERON:0003497,6.57e-08,1;UBERON:0003909,6.57e-08,1;UBERON:0003928,6.57e-08,1;UBERON:0003835,6.57e-08,1;UBERON:0003513,6.57e-08,1;UBERON:0001280,6.57e-08,1;UBERON:0004647,6.57e-08,1;UBERON:0002294,6.57e-08,1;UBERON:0001173,6.57e-08,1;UBERON:0004912,6.57e-08,1;UBERON:0005171,6.57e-08,1;UBERON:0000947,9.75e-08,4;UBERON:0001637,9.75e-08,4;UBERON:0004573,9.75e-08,4;UBERON:0003509,9.75e-08,4;UBERON:0004571,9.75e-08,4;UBERON:0010191,9.75e-08,4;UBERON:0004572,9.75e-08,4;UBERON:0000344,1.05e-07,15 | |||
|phase1_expression=0,2.09385244583617,2.72999543633722,2.72217790176147,3.00537437967808,0.839396359559449,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.68822784320151,0,0.86152399231815,0.861884930743556,0,0.252030129759931,0,0,0,0,0.866554859253824,0,0.816677425049476,0.837063261473815,0.7813353445238,1.0470474879476,2.35292595212406,0,0.485510353031154,2.26614272356039,2.63580021170738,0.917733760808408,0,0,0.878744730937887,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,4.12537673821954,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.427115042397309,0,0.075726193333184,0.151143120213571,1.44932244350839,0,2.719885334831,0,0,0,0,0,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.289198713839823,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p3@Vcl | |||
}} |
Latest revision as of 18:46, 25 September 2015
Short description: | p3@Vcl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vcl_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_ENSMUST00000022369, NM_009502, uc007sky.1, uc007skz.1_5end |
EntrezGene: | Vcl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.05e-19 | 6 |
gut absorptive cell | 7.05e-19 | 6 |
enterocyte | 7.05e-19 | 6 |
endodermal cell | 2.62e-16 | 20 |
columnar/cuboidal epithelial cell | 3.14e-16 | 7 |
mesodermal cell | 5.85e-16 | 7 |
epithelial cell | 5.90e-13 | 25 |
intestinal epithelial cell | 1.09e-12 | 9 |
epithelial cell of alimentary canal | 1.09e-12 | 9 |
multi-potent skeletal muscle stem cell | 2.16e-12 | 9 |
endo-epithelial cell | 1.76e-11 | 15 |
muscle precursor cell | 5.11e-11 | 6 |
muscle cell | 5.11e-11 | 6 |
myoblast | 5.11e-11 | 6 |
smooth muscle cell | 5.01e-10 | 3 |
vascular associated smooth muscle cell | 5.01e-10 | 3 |
aortic smooth muscle cell | 5.01e-10 | 3 |
smooth muscle myoblast | 5.01e-10 | 3 |
embryonic cell | 7.70e-09 | 70 |
lining cell | 6.57e-08 | 1 |
meso-epithelial cell | 6.57e-08 | 1 |
endothelial cell | 6.57e-08 | 1 |
endothelial cell of sinusoid | 6.57e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.57e-08 | 1 |