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FFCP PHASE1:Mm9::chr8:88016467..88016525,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:88016467..88016525,+ |short_description=p1@Gpt2 |description=CAGE_peak_1_at_Gpt2_5end |association_with_transcript=0bp_to_ENSMUST00000034136,ENSMUST0000013...")
 
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{{FFCP
{{FFCP
|id=chr8:88016467..88016525,+
|DHSsupport=NA
|short_description=p1@Gpt2
|DPIdataset=NA
|description=CAGE_peak_1_at_Gpt2_5end
|association_with_transcript=0bp_to_ENSMUST00000034136,ENSMUST00000132932,ENSMUST00000143659,NM_173866,uc009mpx.1,uc009mpy.1_5end
|EntrezGene=108682
|EntrezGene=108682
|HGNC=
|HGNC=
|MCL_coexpression_id=3690
|TSSclassifier=NA
|UniProt=Q8BGT5,D6RFQ8
|UniProt=Q8BGT5,D6RFQ8
|association_with_transcript=0bp_to_ENSMUST00000034136,ENSMUST00000132932,ENSMUST00000143659,NM_173866,uc009mpx.1,uc009mpy.1_5end
|cluster_id=chr8:88016467..88016525,+
|description=CAGE_peak_1_at_Gpt2_5end
|id=chr8:88016467..88016525,+
|ontology_enrichment_celltype=CL:0000221!7.99e-07!44;CL:0000133!7.99e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000221,7.97e-07,44;CL:0000133,7.97e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-11,75;UBERON:0004121,8.13e-11,95;UBERON:0000924,8.13e-11,95;UBERON:0006601,8.13e-11,95;UBERON:0001017,1.11e-10,73;UBERON:0004111,1.33e-10,122;UBERON:0002365,2.34e-10,25;UBERON:0002330,2.34e-10,25;UBERON:0000073,3.12e-09,54;UBERON:0009854,3.67e-09,23;UBERON:0009856,3.67e-09,23;UBERON:0001049,9.07e-09,52;UBERON:0005068,9.07e-09,52;UBERON:0006241,9.07e-09,52;UBERON:0007135,9.07e-09,52;UBERON:0002107,1.03e-08,22;UBERON:0007499,1.03e-08,22;UBERON:0006925,1.03e-08,22;UBERON:0009497,1.03e-08,22;UBERON:0000015,1.03e-08,22;UBERON:0002423,1.03e-08,22;UBERON:0006235,1.03e-08,22;UBERON:0008835,1.03e-08,22;UBERON:0003894,1.03e-08,22;UBERON:0004161,1.03e-08,22;UBERON:0008836,1.03e-08,22;UBERON:0000025,4.17e-08,114;UBERON:0002020,1.66e-07,34;UBERON:0010371,9.49e-07,73
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0271468,24.8860748720242,42.2510732899109,48.4775927268404,15.6992373346178,19.0277264025662,16.139448632556,16.790777052105,16.0508319216239,11.7357238645754,16.7963656448696,28.3120229949419,23.4336597201226,46.0848010012585,1.26404448251271,3.44632865993279,4.00572732942826,3.11809975146708,3.93858730468459,2.78153896693771,2.04332264183947,2.21534290761866,1.31256384932592,1.143102099825,0.907435666231565,1.46186821109629,1.6356013078856,2.57129184799452,31.062062555284,1.99787358036658,1.07656627931371,1.67884616364078,33.2286101735368,18.0175176433135,17.948859178192,31.9408884827808,215.174432631171,20.8958181768315,31.7624413189952,26.9260891316516,28.8713346337395,20.5524755931193,24.9279986138601,19.5756525067224,20.2644541450899,28.5479717660049,21.7459330935764,27.607434457391,24.7395421508639,23.2197703825622,17.0174701947806,25.3631926779859,30.3341788942523,20.8911924133518,17.1009097508282,20.5388294138762,20.7211713646314,14.9552786935241,17.1649970661329,18.8219430014464,20.2959733123436,19.2408821001304,19.528041342606,18.8891451290114,22.7632880147172,21.4284668417719,13.8366984926333,16.8005933668854,16.3277741666591,20.028639955575,17.1508771626148,17.4102353768362,19.4613598150856,17.3781574229134,19.7302283578382,16.8397101168869,16.8342681497322,19.5747779904887,20.3904278517416,15.1415485972785,20.4516630365475,20.2551941530198,24.2316260599808,16.8430758080694,21.0573632967332,10.9034349279241,12.7943023089319,13.4483344659844
|phase1_expression=21.780243206252,1.74487703819681,2.27499619694768,2.41971369045464,3.00537437967808,11.5836697619204,9.1108929832255,0.774739940649458,11.6854639385883,6.31974221069382,18.320322600129,15.7151153220813,0.171200729931206,0.174840804837995,0.666219523631325,0.202475267389826,0,0.630924330716475,1.09691546884591,0.84877930359606,33.7621861899747,11.9149141441062,14.3659884026414,2.3998863419011,2.2940928106717,1.14846392823004,4.30761996159075,2.15471232685889,6.46079626151671,5.79669298447841,2.43903561720835,4.44521471421742,6.1506478758457,15.8481681015439,1.44425809875637,1.66234645358492,1.63335485009895,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,9.4422613481683,9.52943153463437,11.3798986340243,18.7773922643529,39.0265029920999,33.8316721411087,25.0814569805826,25.1975558925653,63.2511283205875,1.34226084846189,0,0,10.8048963135098,11.747871037489,8.25075347643908,28.5266209812033,20.6306481916093,20.2826049121977,6.43804610931351,12.450127145556,7.64914759689189,7.9109309005358,6.3943210345149,38.3488141463558,53.0221261343745,21.9821978093973,19.7108669964268,21.8737959805437,50.845875223877,51.462370041726,17.6386750869534,20.8943126819755,17.4651569455904,34.1359231098105,26.0482169693783,32.8717981168361,18.7278528576875,19.0294298693012,18.7528813400434,29.5933978941464,24.1987922313622,27.5036845998258,49.4976023595762,49.2606015564896,38.7710847316625,26.8827986332803,25.9966166767342,55.9438463194238,198.7579155827,253.629307472991,241.787029853742,315.791338879567,394.263660645655,98.8728717727533,13.8048561288227,11.4305842025262,13.4269038313929,27.0419365971227,5.13305909657271,0,0,10.1750789275271,11.9079136773296,11.1215377903252,154.833340899045,3.10725460376606,33.84480770678,12.4909435271618,8.22056791442781,10.6083128737787,11.7563659631046,13.2875239063346,78.5416195810472,228.160955218827,20.2439099687876,20.3460426948471,16.3384518446883,26.2801406967868,13.091631834651,39.1422698558057,26.3502717310392,24.9241581108012,6.89734049063197,2.39630249011841,3.59941638596045,2.28726408731516,36.8484972935864,42.5475560621323,24.12563560567,31.1145533144175,35.0330176542553,31.5837827730531,38.126696820923,18.4329248569072,30.1064868876425,48.2700468608319,5.6819301089348,11.9710807525687,13.3343220571414,14.5850325142333,12.9606143338715,6.32739442107349,7.43059577652129,8.24575176125614,6.46758426847539,29.3172470388665,32.1480336285293,26.5686197487563,21.0427903130472,13.3462679628287,17.4126083261083,19.1377386859387,15.723707078661,0.702213187313235,3.08817488537658,4.26245249093389,9.11353399156208,7.50483391939508,4.68161359798639,5.20838418287463,3.14822770795846,3.5481435964097,3.95307706075693,2.95100741539581,5.25444040652263,5.9241545968853,13.9542344467231,31.6168357228837,36.2575968814824,29.2001653337097,36.3699394840608,41.8476997642613,21.5070639872704,6.93879444265976,2.11560453330835,20.2623838008472,15.3276203427889,7.34544529535932,8.87407508342707,7.11609740303585,11.223311940641,4.2707615539006,5.76446341534038,9.80207314321051,6.76452004939913,6.82374304916921,3.59527763461689,7.78096979548899,9.75792238946399,12.5180814629034,10.2823661348756,14.6520056375005,10.386217720111,11.0552917685547,7.99548346749632,13.2164362589698,23.1747932327975,25.9047900938268,18.1393830965047,305.049753272676,11.8460025058427,16.7075145846223,16.4149342040943,23.1260538382893,33.0412708860811,40.7401362850272,35.3866249064497,33.3998567156573,36.5166679540148,27.3159592401974,21.9563159124417,23.7148631567066,129.320385508921,222.093997940127,391.744139347054,4.98833613449833,16.2962614122617,12.711268162478,10.0149600607361,8.91822943496308,9.5478566741835,9.28370199455454,4.87834119644497,5.2019597555043,3.98636441367795,5.74037167166954,5.57135270033509,8.97961905702657,9.69148692496127,4.52373851817817,2.71952841909355,111.630489975321,106.511584073627,37.5688380571433,41.6101487402321,39.8361917265321,129.517585655843,14.8288863125641,8.19921363022941,14.2179442503647,16.7278158566786,17.3782965784267,21.7968928707401,11.334699646897,14.028281179743,13.4397844501818,32.4534529586025,31.0848786606108,19.4091507997308,13.3567306669932,38.6030087755733,46.460798418987,24.2780636154981,23.2789138862858,21.1237689326606,23.0335476447003,19.9832846163553,23.7754029714763,24.7202936044704,22.8158322166222,44.5611828689501,64.3053512307493,58.7872596514665,7.83011093233712,15.8453762747553,13.0652270620582,13.2888961719587,15.2512600932355,16.7666688545946,13.9866667511803,15.22324745573,37.7821449982574,13.9809166770121,271.029401209548,27.7008904941686,17.2766936564619,15.1988570818953,14.9215430003921,15.2651036762907,6.70405924248657,42.8332447644277,1.19609616558497,9.70018279427146,2.96311243791539,0.753473828018764,0.546776910884101,1.14389086603261,2.88963330989554,2.93898049879682,3.59319931891502,91.6483793294509,20.2455035891927,18.5020715085432,13.5006676027252,16.517975385143,28.1687707232569,37.4922882949802,35.1277186832678,107.058180271468,24.8860748720242,42.2510732899109,48.4775927268404,15.6992373346178,19.0277264025662,16.139448632556,16.790777052105,16.0508319216239,11.7357238645754,16.7963656448696,28.3120229949419,23.4336597201226,46.0848010012585,1.26404448251271,3.44632865993279,4.00572732942826,3.11809975146708,3.93858730468459,2.78153896693771,2.04332264183947,2.21534290761866,1.31256384932592,1.143102099825,0.907435666231565,1.46186821109629,1.6356013078856,2.57129184799452,31.062062555284,1.99787358036658,1.07656627931371,1.67884616364078,33.2286101735368,18.0175176433135,17.948859178192,31.9408884827808,215.174432631171,20.8958181768315,31.7624413189952,26.9260891316516,28.8713346337395,20.5524755931193,24.9279986138601,19.5756525067224,20.2644541450899,28.5479717660049,21.7459330935764,27.607434457391,24.7395421508639,23.2197703825622,17.0174701947806,25.3631926779859,30.3341788942523,20.8911924133518,17.1009097508282,20.5388294138762,20.7211713646314,14.9552786935241,17.1649970661329,18.8219430014464,20.2959733123436,19.2408821001304,19.528041342606,18.8891451290114,22.7632880147172,21.4284668417719,13.8366984926333,16.8005933668854,16.3277741666591,20.028639955575,17.1508771626148,17.4102353768362,19.4613598150856,17.3781574229134,19.7302283578382,16.8397101168869,16.8342681497322,19.5747779904887,20.3904278517416,15.1415485972785,20.4516630365475,20.2551941530198,24.2316260599808,16.8430758080694,21.0573632967332,10.9034349279241,12.7943023089319,13.4483344659844
|short_description=p1@Gpt2
}}
}}

Latest revision as of 22:39, 25 September 2015

Short description:p1@Gpt2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpt2_5end
Coexpression cluster:MCL_coexpression_mm9:3690
Association with transcript: 0bp_to_ENSMUST00000034136, ENSMUST00000132932, ENSMUST00000143659, NM_173866, uc009mpx.1, uc009mpy.1_5end
EntrezGene:Gpt2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpt2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E618.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A333.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C328.53
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C838.35
Mouse Microglia, donor2.CNhs12634.11736-123E853.02
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.71
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D649.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D926.88
Mouse Schwann, donor2.CNhs12573.11746-123F926.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G355.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7198.76
Mouse hepatocyte, donor1.CNhs13078.11714-123C4253.63
Mouse hepatocyte, donor3.CNhs12615.11637-122C8241.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F4315.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F6394.26
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A798.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6154.83
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D733.84
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F511.76
adrenal gland, neonate N00.CNhs11191.1311-23C113.29
adrenal gland, neonate N25.CNhs11223.1377-27I378.54
amnion, adult pregnant day17.5.CNhs10488.583-22A8228.16
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F516.34
bone (os femoris), neonate N16.CNhs11225.1525-43A626.28
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B226.35
cerebellum, neonate N30.CNhs11135.1395-42I224.92
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A436.85
corpus striatum, adult.CNhs10487.19-21D842.55
corpus striatum, neonate N00.CNhs11226.630-43F124.13
cortex, adult.CNhs10473.12-14D531.11
cortex, neonate N30.CNhs11107.1392-42F235.03
diencephalon, adult.CNhs10482.20-12F231.58
diencephalon, neonate N30.CNhs11201.1388-42B238.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.11
epididymis, adult.CNhs10490.58-23B248.27
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C914.59
eyeball, embryo E17.CNhs11023.1261-18D412.96
eyeball, neonate N00.CNhs11207.633-15C66.33
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E229.32
forelimb, embryo E12.CNhs10600.359-14H232.15
forelimb, embryo E13.CNhs10589.384-1E226.57
forelimb, embryo E14.CNhs10577.413-26A821.04
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E99.11
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G113.95
heart, neonate N16.CNhs11209.782-15G131.62
heart, neonate N20.CNhs11127.821-26I636.26
heart, neonate N25.CNhs11196.1351-25D329.20
heart, neonate N30.CNhs11202.1390-42D236.37
hippocampus, adult.CNhs10478.13-16E841.85
hippocampus, neonate N00.CNhs11228.627-43G121.51
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I520.26
intestine, embryo E13.CNhs11010.381-16D515.33
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G19.76
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F810.28
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C711.06
kidney, neonate N00.CNhs11214.646-21G78.00
kidney, neonate N10.CNhs11206.758-6D513.22
kidney, neonate N20.CNhs11113.832-19I123.17
kidney, neonate N25.CNhs11122.1353-25F325.90
kidney, neonate N30.CNhs11203.1385-42H118.14
liver, adult pregnant day01.CNhs10466.508-5B2305.05
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H616.71
liver, embryo E14.CNhs10594.409-16E116.41
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F533.04
liver, embryo E17.CNhs10510.481-18A340.74
liver, embryo E18.CNhs10579.499-43G435.39
liver, neonate N00.CNhs11117.641-24F433.40
liver, neonate N03.CNhs11123.1345-25G236.52
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A3129.32
liver, neonate N25.CNhs11198.1368-26H1222.09
liver, neonate N30.CNhs11106.1382-42D1391.74
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G216.30
lung, embryo E14.CNhs10604.404-26F812.71
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B6111.63
mammary gland, adult pregnant day19.CNhs10476.588-5H2106.51
medulla oblongata, adult.CNhs10477.17-12C237.57
medulla oblongata, neonate N30.CNhs11200.1396-42A341.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C739.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2129.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I932.45
ovary, adult.CNhs10507.91-2I731.08
ovary, embryo E18.CNhs11040.505-44H719.41
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G638.60
pancreas, adult.CNhs10486.34-16E446.46
pancreas, embryo E14.CNhs11012.405-44F424.28
pancreas, embryo E15.CNhs11042.1556-45F223.28
pancreas, embryo E16.CNhs11003.460-26E521.12
pancreas, embryo E17.CNhs10599.1558-45G323.03
pancreas, embryo E18.CNhs10580.1535-43I719.98
pancreas, neonate N00.CNhs11105.645-26G923.78
pancreas, neonate N01.CNhs11138.1531-43D724.72
pancreas, neonate N02.CNhs11139.1539-43D822.82
pancreas, neonate N16.CNhs11136.787-43B644.56
pancreas, neonate N25.CNhs11094.1555-45E264.31
pancreas, neonate N30.CNhs11182.1548-44H558.79
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E615.85
pituitary gland, embryo E13.CNhs11009.370-44C713.07
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F616.77
pituitary gland, embryo E17.CNhs11039.1265-44F513.99
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I737.78
placenta, adult pregnant day17.CNhs10464.577-18G313.98
prostate, adult.CNhs10470.859-1F8271.03
skin, adult.CNhs10492.30-1C327.70
skin, neonate N00.CNhs11124.650-25G417.28
skin, neonate N03.CNhs11215.662-22H315.20
skin, neonate N06.CNhs11097.693-20I514.92
skin, neonate N10.CNhs11108.762-6C415.27
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C942.83
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H691.65
stomach, embryo E12.CNhs10588.356-43E320.25
stomach, embryo E15.CNhs10603.1252-16G818.50
stomach, embryo E16.CNhs11022.459-17D413.50
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C628.17
stomach, neonate N03.CNhs11193.1340-24B837.49
stomach, neonate N07.CNhs11210.718-18A935.13
stomach, neonate N25.CNhs11104.1355-25E4107.06
stomach, neonate N30.CNhs11134.1386-42I124.89
submandibular gland, adult.CNhs10469.59-29C142.25
testis, adult.CNhs10504.57-7G548.48
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C519.03
testis, embryo E16.CNhs11033.470-26G516.14
testis, embryo E17.CNhs11029.486-18I516.79
testis, embryo E18.CNhs11027.503-18G516.05
testis, neonate N00.CNhs11189.1300-22B711.74
testis, neonate N07.CNhs11222.726-26I416.80
testis, neonate N10.CNhs11204.763-44D928.31
testis, neonate N20.CNhs11110.839-18H323.43
testis, neonate N30.CNhs11130.1391-42E246.08
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B431.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E433.23
uterus, adult pregnant day19.CNhs10497.590-15F518.02
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D531.94
vesicular gland, adult.CNhs10491.51-27F8215.17
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I827.61
whole body, embryo E12.CNhs10587.857-27C924.74
whole body, embryo E13.CNhs10512.372-23H223.22
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B125.36
whole body, embryo E16.CNhs10514.453-14F230.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.16
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.45
whole body, embryo E17.5.CNhs10513.490-9F920.26
whole body, embryo E17.CNhs10517.475-3I524.23
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C221.06
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D112.79
whole body, neonate N10.CNhs10518.761-6B413.45





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell7.97e-0744
neurectodermal cell7.97e-0744

Uber anatomy
Ontology termp-valuen
nervous system3.71e-1175
ectoderm-derived structure8.13e-1195
ectoderm8.13e-1195
presumptive ectoderm8.13e-1195
central nervous system1.11e-1073
anatomical conduit1.33e-10122
exocrine gland2.34e-1025
exocrine system2.34e-1025
regional part of nervous system3.12e-0954
digestive tract diverticulum3.67e-0923
sac3.67e-0923
neural tube9.07e-0952
neural rod9.07e-0952
future spinal cord9.07e-0952
neural keel9.07e-0952
liver1.03e-0822
epithelial sac1.03e-0822
digestive gland1.03e-0822
epithelium of foregut-midgut junction1.03e-0822
anatomical boundary1.03e-0822
hepatobiliary system1.03e-0822
foregut-midgut junction1.03e-0822
hepatic diverticulum1.03e-0822
liver primordium1.03e-0822
septum transversum1.03e-0822
liver bud1.03e-0822
tube4.17e-08114
gray matter1.66e-0734
ecto-epithelium9.49e-0773
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