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FFCP PHASE1:Mm9::chr3:95032232..95032290,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57912
|EntrezGene=57912
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q8BHL7
|UniProt=Q8BHL7
|association_with_transcript=-363bp_to_ENSMUST00000053872_5end
|association_with_transcript=-363bp_to_ENSMUST00000053872_5end
|cluster_id=chr3:95032232..95032290,+
|description=CAGE_peak_2_at_Cdc42se1_5end
|description=CAGE_peak_2_at_Cdc42se1_5end
|id=chr3:95032232..95032290,+
|id=chr3:95032232..95032290,+
|ontology_enrichment_celltype=CL:0000221!3.98e-10!44;CL:0000133!3.98e-10!44;CL:0002319!9.17e-10!43;CL:0000540!1.24e-09!33;CL:0000047!1.24e-09!33;CL:0000031!1.24e-09!33;CL:0000404!1.24e-09!33;CL:0000034!3.65e-09!97;CL:0000055!7.30e-09!50;CL:0000393!2.28e-08!39;CL:0000211!2.28e-08!39;CL:0000838!7.21e-08!12;CL:0000542!1.46e-07!13;CL:0000051!1.46e-07!13;CL:0000084!2.89e-07!11;CL:0000827!2.89e-07!11;CL:0000791!8.31e-07!9;CL:0000789!8.31e-07!9;CL:0002420!8.31e-07!9;CL:0002419!8.31e-07!9;CL:0000790!8.31e-07!9;CL:0000723!8.53e-07!91;CL:0000048!8.53e-07!91
|ontology_enrichment_celltype_v019_2=CL:0000034,1.37e-11,97;CL:0000221,8.84e-11,44;CL:0000133,8.84e-11,44;CL:0000540,1.13e-10,33;CL:0000047,1.13e-10,33;CL:0000031,1.13e-10,33;CL:0000404,1.13e-10,33;CL:0002319,2.20e-10,43;CL:0000393,6.82e-09,39;CL:0000211,6.82e-09,39;CL:0000723,9.16e-09,91;CL:0000048,9.16e-09,91;CL:0000838,1.82e-08,12;CL:0000542,3.94e-08,13;CL:0000051,3.94e-08,13;CL:0000084,8.28e-08,11;CL:0000827,8.28e-08,11;CL:0000791,2.63e-07,9;CL:0000789,2.63e-07,9;CL:0002420,2.63e-07,9;CL:0002419,2.63e-07,9;CL:0000790,2.63e-07,9;CL:0000738,3.37e-07,17;CL:0002087,3.37e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.45e-08!75;UBERON:0001016!3.45e-08!75;UBERON:0001017!1.81e-07!73;UBERON:0005743!1.81e-07!73;UBERON:0000153!5.90e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.46e-08,75;UBERON:0001017,1.43e-07,73;UBERON:0004121,1.87e-07,95;UBERON:0000924,1.87e-07,95;UBERON:0006601,1.87e-07,95;UBERON:0000010,8.14e-07,11
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,5.4231795845462,37.7313775366467,44.2381954748568,8.38968044304974,11.1681022593471,2.39681021903688,4.19617931611188,0,0.607425802169478,0.699561878128147,3.94327706697797,1.91960207048034,1.69755860719212,0.935476191661768,3.27660138962921,2.08959831311148,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.665191531965914,6.98533740805594,3.69038872550742,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.506884656097573,1.10128051297009,3.12956537739216,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,5.70460860596304,6.5282592781021,12.4354705682712,1.54355661621568,1.43266719969378,1.03134418455488,4.85559506063035,6.34789175126439,3.80298842103708,1.35537812827653,1.77858959222228,1.3498495759221,0,0,2.39680088414724,2.30530983192933,4.87341177849845,5.53524347159932,4.83747411108179,2.85650984403804,3.09215957332259,4.77714116938321,7.66763768145891,5.51531271966013,0,0.383062014255563,0.768032666281217,4.74790635828698,4.29991924931325,2.08365348222704,0,1.12552522006336,1.22238598221448,2.35702868378934,2.84743361598206,3.91438836233131,5.90664307998836,2.72057616384428,1.73918693221007,1.72084775396277,1.3599426674155,0,0,0,0.702222100658759,0.170430322578058,1.29893002301434,0,2.95771181531029,0,0,0,0.216491041011214,0,2.02209778005913,0.22836775943812,2.33044095282455,0.445326417194474,1.21439728736295,0.304465478312141,0.922461989024234,0.904335843315735,1.29347577849275,0.125666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0.969750506270444,0,0,0.83778682725382,0,5.99075622529601,2.39961092397363,2.54140454146129,0.449371918214468,1.37250180845588,3.01570445070875,1.04294592115366,0.511430914660661,0,0.486723789203273,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,4.55421550369463,1.83921683546778,3.06105620669094,2.26057226753573,2.51735046859913,2.17793324484245,2.34254311399322,0.517406741478031,1.07783996466421,1.70195472151037,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.23469281844766,2.38841120182192,0.702213187313235,0.772043721344145,0.568326998791185,2.07125772535502,2.11073453982987,1.2604344302271,0.946978942340841,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,0.820837320395476,0.324275238183423,0.292399974850665,0,0,1.68231958851302,3.39585220851639,0,0,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.55664630691409,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.974820435595601,0,0.216138049874694,0.199141273254367,2.27601481143698,1.48523066392647,1.1270773567308,1.4255592949172,0.775809948670503,1.05203729835478,0.822074982615345,0.442830443938806,0.470996183524124,0.616985819609003,0,1.33476084572875,0.786235980452812,0.224862112384854,0.405720242777006,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0,0,0,0,1.10851914099963,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,1.50755631697634,0.714130922658041,0.585400943573396,0.788175720530955,1.10732344824387,0.637819074629948,0.163863314715738,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.937693492737625,0.983609672260053,0,4.73262329124385,3.12350995437311,5.38558494331997,1.91175038362042,5.56996685205985,2.54768877709949,4.45291771842384,5.84511715822624,3.95287777946523,0,0.851640511249612,1.42452482933804,0.651547837414304,1.48473110675282,0,0.728341908464944,2.11626489875326,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,0,0,1.02131881726136,2.34079422240703,2.45781499187234,1.92903331528433,2.30542303734956,2.31879462882692,2.30368628842969,3.65357938937519,2.3467170806371,1.90648863777438,0,0.32977250588296,0.968786560175433,1.5078231232039,1.19372344003136,1.14898629821543,0.582961673259701,0.18542530201051,1.19609616558497,1.857481811669,1.11116716421827,0.565105371014073,0.546776910884101,0.915112692826091,7.47905091972963,8.6769900440668,6.77179871641677,0,3.16335993581135,1.42323626988794,0.648032044930808,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0.129614973291793,0,5.07323644815771,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,1.520605129417,1.29092962510329,4.29674469985035,4.40409246587986,0.966336483304024,3.16833006883652,2.52808896502543,2.22997736819181,2.15693010046137,1.16928740680016,2.32734704367726,1.19208812868759,2.04332264183947,2.36303243479324,1.11063094942962,1.752756553065,1.91569751759997,2.63136277997332,2.30908419936791,3.03879945672079,0.226730383615211,3.32978930061097,5.29311753995907,5.37230772365051,0.19318959403219,0.563047426353546,0.915758121336325,0.857473516316263,0,1.12950368523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|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,5.4231795845462,37.7313775366467,44.2381954748568,8.38968044304974,11.1681022593471,2.39681021903688,4.19617931611188,0,0.607425802169478,0.699561878128147,3.94327706697797,1.91960207048034,1.69755860719212,0.935476191661768,3.27660138962921,2.08959831311148,0,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.665191531965914,6.98533740805594,3.69038872550742,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.506884656097573,1.10128051297009,3.12956537739216,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,5.70460860596304,6.5282592781021,12.4354705682712,1.54355661621568,1.43266719969378,1.03134418455488,4.85559506063035,6.34789175126439,3.80298842103708,1.35537812827653,1.77858959222228,1.3498495759221,0,0,2.39680088414724,2.30530983192933,4.87341177849845,5.53524347159932,4.83747411108179,2.85650984403804,3.09215957332259,4.77714116938321,7.66763768145891,5.51531271966013,0,0.383062014255563,0.768032666281217,4.74790635828698,4.29991924931325,2.08365348222704,0,1.12552522006336,1.22238598221448,2.35702868378934,2.84743361598206,3.91438836233131,5.90664307998836,2.72057616384428,1.73918693221007,1.72084775396277,1.3599426674155,0,0,0,0.702222100658759,0.170430322578058,1.29893002301434,0,2.95771181531029,0,0,0,0.216491041011214,0,2.02209778005913,0.22836775943812,2.33044095282455,0.445326417194474,1.21439728736295,0.304465478312141,0.922461989024234,0.904335843315735,1.29347577849275,0.125666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0.969750506270444,0,0,0.83778682725382,0,5.99075622529601,2.39961092397363,2.54140454146129,0.449371918214468,1.37250180845588,3.01570445070875,1.04294592115366,0.511430914660661,0,0.486723789203273,1.2220723662038,0.373220911830279,0.758168275301024,0.420883711772948,4.55421550369463,1.83921683546778,3.06105620669094,2.26057226753573,2.51735046859913,2.17793324484245,2.34254311399322,0.517406741478031,1.07783996466421,1.70195472151037,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.23469281844766,2.38841120182192,0.702213187313235,0.772043721344145,0.568326998791185,2.07125772535502,2.11073453982987,1.2604344302271,0.946978942340841,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,0.934122738937356,1.6455984991348,0.820837320395476,0.324275238183423,0.292399974850665,0,0,1.68231958851302,3.39585220851639,0,0,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.55664630691409,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.974820435595601,0,0.216138049874694,0.199141273254367,2.27601481143698,1.48523066392647,1.1270773567308,1.4255592949172,0.775809948670503,1.05203729835478,0.822074982615345,0.442830443938806,0.470996183524124,0.616985819609003,0,1.33476084572875,0.786235980452812,0.224862112384854,0.405720242777006,0,1.2731292589071,0.287696137450811,0,0.274561413188081,0,1.11642284300551,0,0,0,0,1.10851914099963,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,1.50755631697634,0.714130922658041,0.585400943573396,0.788175720530955,1.10732344824387,0.637819074629948,0.163863314715738,0.518054945597687,0.144649058581512,0,1.08781136763742,0,0,0.963303539926752,0.937693492737625,0.983609672260053,0,4.73262329124385,3.12350995437311,5.38558494331997,1.91175038362042,5.56996685205985,2.54768877709949,4.45291771842384,5.84511715822624,3.95287777946523,0,0.851640511249612,1.42452482933804,0.651547837414304,1.48473110675282,0,0.728341908464944,2.11626489875326,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,0,0,1.02131881726136,2.34079422240703,2.45781499187234,1.92903331528433,2.30542303734956,2.31879462882692,2.30368628842969,3.65357938937519,2.3467170806371,1.90648863777438,0,0.32977250588296,0.968786560175433,1.5078231232039,1.19372344003136,1.14898629821543,0.582961673259701,0.18542530201051,1.19609616558497,1.857481811669,1.11116716421827,0.565105371014073,0.546776910884101,0.915112692826091,7.47905091972963,8.6769900440668,6.77179871641677,0,3.16335993581135,1.42323626988794,0.648032044930808,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0.129614973291793,0,5.07323644815771,2.24274819065968,2.97825282822776,1.94451188344048,2.58319646955462,1.520605129417,1.29092962510329,4.29674469985035,4.40409246587986,0.966336483304024,3.16833006883652,2.52808896502543,2.22997736819181,2.15693010046137,1.16928740680016,2.32734704367726,1.19208812868759,2.04332264183947,2.36303243479324,1.11063094942962,1.752756553065,1.91569751759997,2.63136277997332,2.30908419936791,3.03879945672079,0.226730383615211,3.32978930061097,5.29311753995907,5.37230772365051,0.19318959403219,0.563047426353546,0.915758121336325,0.857473516316263,0,1.12950368523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|short_description=p2@Cdc42se1
|short_description=p2@Cdc42se1
}}
}}

Latest revision as of 23:06, 25 September 2015

Short description:p2@Cdc42se1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdc42se1_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -363bp_to_ENSMUST00000053872_5end
EntrezGene:Cdc42se1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdc42se1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E737.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.77
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.29
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.46e-0875
central nervous system1.43e-0773
ectoderm-derived structure1.87e-0795
ectoderm1.87e-0795
presumptive ectoderm1.87e-0795
peripheral nervous system8.14e-0711
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