FFCP PHASE1:Mm9::chr7:138009349..138009456,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:138009349..138009456,+ to FFCP PHASE1:Mm9::chr7:138009349..138009456,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=101476 | |EntrezGene=101476 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BUL6,D6RCU3,D3YU01 | |UniProt=Q8BUL6,D6RCU3,D3YU01 | ||
|association_with_transcript=0bp_to_ENSMUST00000048180,ENSMUST00000075181,ENSMUST00000140153,ENSMUST00000148513,ENSMUST00000151119,NM_133942,uc009kaq.1,uc009kar.1,uc009kas.1,uc009kat.1_5end | |||
|cluster_id=chr7:138009349..138009456,+ | |||
|description=CAGE_peak_1_at_Plekha1_5end | |||
|id=chr7:138009349..138009456,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.50e-07!33;CL:0000047!1.50e-07!33;CL:0000031!1.50e-07!33;CL:0000404!1.50e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.50e-07,33;CL:0000047,1.50e-07,33;CL:0000031,1.50e-07,33;CL:0000404,1.50e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.44e-11!102;UBERON:0000924!1.44e-11!102;UBERON:0006601!1.44e-11!102;UBERON:0000033!1.19e-10!63;UBERON:0000073!1.48e-10!75;UBERON:0001016!1.48e-10!75;UBERON:0001017!1.61e-09!73;UBERON:0005743!1.61e-09!73;UBERON:0002020!1.63e-09!34;UBERON:0003056!4.34e-09!49;UBERON:0002791!2.40e-08!29;UBERON:0003528!2.40e-08!29;UBERON:0001893!2.40e-08!29;UBERON:0001049!2.72e-08!52;UBERON:0005068!2.72e-08!52;UBERON:0006241!2.72e-08!52;UBERON:0007135!2.72e-08!52;UBERON:0000955!3.42e-08!50;UBERON:0006238!3.42e-08!50;UBERON:0002346!7.74e-08!71;UBERON:0003075!7.74e-08!71;UBERON:0007284!7.74e-08!71;UBERON:0002616!1.09e-07!49;UBERON:0000468!2.20e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.35e-14,95;UBERON:0000924,3.35e-14,95;UBERON:0006601,3.35e-14,95;UBERON:0010371,4.60e-11,73;UBERON:0001016,1.48e-10,75;UBERON:0002346,1.95e-10,64;UBERON:0003075,1.95e-10,64;UBERON:0007284,1.95e-10,64;UBERON:0001017,1.61e-09,73;UBERON:0002020,1.63e-09,34;UBERON:0003056,4.34e-09,49;UBERON:0000073,7.48e-09,54;UBERON:0010314,8.52e-09,92;UBERON:0003528,2.40e-08,29;UBERON:0002791,2.40e-08,29;UBERON:0001893,2.40e-08,29;UBERON:0001049,2.72e-08,52;UBERON:0005068,2.72e-08,52;UBERON:0006241,2.72e-08,52;UBERON:0007135,2.72e-08,52;UBERON:0000955,2.53e-07,47;UBERON:0006238,2.53e-07,47;UBERON:0002616,7.70e-07,46 | |||
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|phase1_expression=17.7765220286321,69.4461061202329,59.6049003600292,59.5854496274455,52.0931559144201,24.5103736991359,24.2957146219347,20.7888550740938,25.0603925429967,30.1943238955372,27.7373108525318,22.4957488366849,28.0769197087177,21.1557373853974,7.99463428357591,6.47920855647443,2.09868563438444,21.7668894097184,21.8011949433125,27.585327366872,26.1933333665295,11.2198774857,13.3211892460857,35.0383405917561,36.9348942518144,53.9778046268119,42.6454376197484,41.5859479083766,40.665011763664,25.2030129759931,24.8338171933941,0,0,0,13.8648777480612,11.6364251750945,15.7210404322024,7.11503772252743,11.720030167857,6.80580867165938,5.29408339227913,6.14740936462601,4.36959317728038,7.05022180663233,6.58950052926845,6.24058957349717,4.69434806608824,3.2703773457067,4.61340983742391,9.72149495371417,8.39918529752175,1.43752564364972,19.7983475148129,34.0920206745332,24.8709411365423,15.9500850342287,26.6476099143044,21.1425557833751,43.0934061630943,45.4932242173948,33.5930643858275,11.5207140903505,5.33576877666684,11.6986963246582,14.8329954385046,7.8152812644071,9.28760342607055,8.83702102239575,34.73602012334,29.8363123713036,29.6558195505449,36.8489769880907,42.6276284036614,31.6026261974581,28.370259421398,41.3648453974509,37.4393995397922,44.8182556679009,50.5365494413041,51.5675385025058,47.573574673253,54.6959039084598,49.4153908232444,34.3285192119325,45.3810795897126,35.0608016713665,40.0064423045479,44.7358669980721,242.248092472856,213.338514181456,34.4938741554997,14.6272059086836,15.6393406752783,9.17495425784289,9.09686984426737,9.40856462904405,17.1342192560737,7.32850387085648,7.01422212427746,5.3000936176551,36.1967588826069,5.13305909657271,0,14.2213340630666,39.1848784230298,40.2842186105407,34.88118670602,21.8091210263405,27.188477782953,15.5864246018066,16.8280766963152,13.0920155674221,16.3737003051802,15.6751546174727,18.1086608988985,11.3099932196708,18.0452326446093,24.2926919625452,10.6153266233985,23.2944263924269,20.0965781798958,21.819386391085,39.1422698558057,50.0655162889746,57.5978443737001,36.5303588948286,8.50687383992034,5.99902730993408,7.24300294316469,40.4434726393021,63.5925837917891,40.4607013803423,55.971431101913,68.7874580218589,39.2719404217569,80.6339077446756,28.9223793334898,26.8719056517801,47.2591558270972,20.8337437327609,36.9542058014079,37.2441409182226,34.2118046630164,55.4593729635431,69.941521127565,67.1315894292613,60.7187175147043,50.4471572941081,6.68260778091811,13.0483195315795,12.4925298156404,16.6588756644957,20.019401944243,29.9496863209063,25.311202778177,17.1169469463904,8.42655824775882,8.23513302767089,6.53576048609863,21.7482061162277,22.9835538781474,21.6074473753218,31.487049832833,31.8758055430794,29.0022172228271,33.0198201545579,27.9004337455604,40.2840431166735,32.2537305830422,41.0418660197738,38.6698221533732,38.8891966551384,35.1280184465681,40.5303384656323,45.2123389412874,39.9269896031624,78.9700891331277,31.2051668662982,12.797295032114,15.5598570146494,15.5929628199733,21.5801371346977,18.902133726814,16.5496294717926,45.0802608467286,23.8813484349816,34.4329236056369,30.4403402222961,29.6345412421063,44.0421510240569,58.1411354162927,52.7724374124073,14.9837641752935,30.7328498920171,24.7957018480777,35.4353310450847,36.269115100346,33.1742428081207,37.3095569033118,42.2165023221662,48.9836030865089,45.0399648314572,7.11486305009157,7.50802975722423,4.12773889737726,8.09503604585473,10.7515864335907,12.7823894668781,18.0784354764808,30.7834867072367,22.2125260681798,22.7885972946108,20.1275489138296,25.3055844414582,20.9065240986756,13.1341016532498,10.0462551572271,8.68398338454061,53.0241655778155,18.380666941737,22.4891667489996,24.6130374374023,28.3975200429088,35.0088078053395,41.1815498732804,55.6130896394727,72.0392608565293,64.4462246877935,84.5110273884682,72.7553117337877,70.1101026375536,68.5636537676365,57.3006878969235,37.529492183491,12.2941068254759,18.2118252561123,41.1009510368747,94.9414661396846,16.5574294830442,24.4896799388242,25.5561657727168,19.5219372148319,30.8055458757902,48.2716971864155,84.6634961513098,98.2275561837249,31.1704240289669,42.0848435392289,45.8533822417967,94.4684670280113,22.4265334629064,13.8891170860459,23.1299482282078,22.9308470931824,17.2568679841952,15.2951800777638,18.4417369748498,24.3300552885109,23.0335476447003,38.7368286409349,35.9215327503827,31.2639007350655,23.1723295950069,28.7593449721593,25.3004660579997,22.6898195146011,38.469675450178,22.8677589419764,10.8661294377514,18.6473220477485,19.8621061679346,19.2638323010236,23.2014119048991,10.9607381681256,65.0040631336478,37.0706124011685,14.1138174755176,38.9131556941893,49.7310434223389,42.1587345247809,46.9133311932326,46.7801564273425,48.9687805538149,45.8000495965959,11.9609616558497,16.5109494370578,10.926477114813,8.09984365120171,7.65487675237741,11.4389086603261,3.56954702987096,4.61839792668071,4.83699908315483,21.9574242143476,13.4442797271983,20.7385856469386,23.2211482766873,24.6724189297073,25.9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| ||
|short_description=p1@Plekha1 | |||
}} | }} |
Latest revision as of 00:31, 26 September 2015
Short description: | p1@Plekha1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plekha1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000048180, ENSMUST00000075181, ENSMUST00000140153, ENSMUST00000148513, ENSMUST00000151119, NM_133942, uc009kaq.1, uc009kar.1, uc009kas.1, uc009kat.1_5end |
EntrezGene: | Plekha1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.50e-07 | 33 |
neuronal stem cell | 1.50e-07 | 33 |
neuroblast | 1.50e-07 | 33 |
electrically signaling cell | 1.50e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.35e-14 | 95 |
ectoderm | 3.35e-14 | 95 |
presumptive ectoderm | 3.35e-14 | 95 |
ecto-epithelium | 4.60e-11 | 73 |
nervous system | 1.48e-10 | 75 |
neurectoderm | 1.95e-10 | 64 |
neural plate | 1.95e-10 | 64 |
presumptive neural plate | 1.95e-10 | 64 |
central nervous system | 1.61e-09 | 73 |
gray matter | 1.63e-09 | 34 |
pre-chordal neural plate | 4.34e-09 | 49 |
regional part of nervous system | 7.48e-09 | 54 |
structure with developmental contribution from neural crest | 8.52e-09 | 92 |
brain grey matter | 2.40e-08 | 29 |
regional part of telencephalon | 2.40e-08 | 29 |
telencephalon | 2.40e-08 | 29 |
neural tube | 2.72e-08 | 52 |
neural rod | 2.72e-08 | 52 |
future spinal cord | 2.72e-08 | 52 |
neural keel | 2.72e-08 | 52 |
brain | 2.53e-07 | 47 |
future brain | 2.53e-07 | 47 |
regional part of brain | 7.70e-07 | 46 |