FFCP PHASE1:Mm9::chr14:57190645..57190657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=219103 | |EntrezGene=219103 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q569L8 | |UniProt=Q569L8 | ||
|association_with_transcript=25bp_to_ENSMUST00000065302,NM_001014996,uc007ucb.2,uc007ucc.2_5end | |association_with_transcript=25bp_to_ENSMUST00000065302,NM_001014996,uc007ucb.2,uc007ucc.2_5end | ||
|cluster_id=chr14:57190645..57190657,- | |||
|description=CAGE_peak_2_at_Cenpj_5end | |description=CAGE_peak_2_at_Cenpj_5end | ||
|id=chr14:57190645..57190657,- | |id=chr14:57190645..57190657,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.71e-09,9;CL:0000789,6.71e-09,9;CL:0002420,6.71e-09,9;CL:0002419,6.71e-09,9;CL:0000790,6.71e-09,9;CL:0000893,6.02e-08,6;CL:0002489,6.02e-08,6;CL:0000898,6.02e-08,6;CL:0000809,6.02e-08,6;CL:0000810,6.02e-08,6;CL:0000895,6.02e-08,6;CL:0000808,6.02e-08,6;CL:0000894,6.02e-08,6;CL:0000806,6.02e-08,6;CL:0000807,6.02e-08,6;CL:0000805,6.02e-08,6;CL:0002425,6.02e-08,6;CL:0002436,6.02e-08,6;CL:0002427,6.02e-08,6;CL:0002428,6.02e-08,6;CL:0002429,6.02e-08,6;CL:0002433,6.02e-08,6;CL:0002431,6.02e-08,6;CL:0002432,6.02e-08,6;CL:0000624,9.38e-08,8;CL:0000084,6.45e-07,11;CL:0000827,6.45e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.10e-10,23;UBERON:0000974,8.10e-10,23;UBERON:0004807,8.10e-10,23;UBERON:0005058,8.10e-10,23;UBERON:0003351,8.10e-10,23;UBERON:0009113,8.10e-10,23;UBERON:0003295,8.10e-10,23;UBERON:0009722,8.10e-10,23;UBERON:0005562,8.10e-10,23;UBERON:0007690,8.10e-10,23;UBERON:0006562,3.20e-09,24;UBERON:0003408,3.20e-09,24;UBERON:0001557,3.20e-09,24;UBERON:0001042,3.20e-09,24;UBERON:0008814,3.20e-09,24;UBERON:0009145,3.20e-09,24;UBERON:0000072,1.04e-07,27;UBERON:0000153,2.88e-07,43;UBERON:0004177,6.88e-07,29;UBERON:0005057,6.88e-07,29;UBERON:0000065,8.15e-07,41 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0.467225281191051,0.645616617207881,18.0209564354133,18.9592266320815,3.76679530096111,2.15384829287408,1.19840510951844,1.39872643870396,0,0.809901069559304,0.699561878128147,0.473193248037357,0.274228867211478,0.84877930359606,0.510259740906419,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,1.1554064790051,0.166234645358492,0.204169356262369,6.69650609179052,3.1253413780952,9.42342739152837,4.1176204162171,5.46436387966757,5.82612423637384,0.125896817975577,0.405507724878058,0.183546752161682,0,0.436050312760893,0,0,0,0,0.671130424230945,2.17608642603403,2.35265659399725,0.771778308107841,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.630974884054146,0,0,0.734944795289724,0.575072826109418,0.919218786610021,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0.284743361598206,0.372798891650601,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,1.21439728736295,0.608930956624282,0,0,0.587943535678524,0,0,0.433798070759735,2.65383165584962,0,0.662524555381181,0,1.86391761218122,0,0.83778682725382,0,0.718890747035522,0,1.01656181658452,0,0,0.502617408451458,0,0,0,0,0.611036183101898,0.497627882440372,0,0,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,0.816437989815934,1.15302348256365,0.468508622798644,0,1.5089759505299,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,1.0447564995665,0.411564272815887,0.59710280045548,0,1.54408744268829,1.42081749697796,0.621377317606506,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,0,1.54356918568927,0.330418782983798,0,1.06644125267617,0.232236671860439,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.379335801906163,1.37098215131675,0,2.03651327845314,1.35766741017338,0.420814919341911,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.982794975566015,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.189491411770485,1.46668478797823,1.86719594352707,1.87752198630802,0.167506257441816,0.952174563544055,0.780534591431195,1.41871629695572,0.664394068946325,0.478364305972461,0,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0.655739781506702,0.504941854408746,1.57754109708128,1.56175497718655,1.72338718186239,0.955875191810208,0.445597348164788,0.849229592366497,2.02405350837447,1.75353514746787,1.58115111178609,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,1.45668381692989,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,0,1.26042765821917,0,0.643011105094777,0,0.178368817602071,0,0,2.11204537257339,0.21183207086382,0,0.16488625294148,1.13025098687134,0.422190474497091,0.358117032009409,0.492422699235184,0,0.18542530201051,0.341741761595705,0.206386867963223,0.925972636848558,0.753473828018764,0.683471138605126,0.228778173206523,1.5298058699447,0.979660166265606,0.276399947608848,0,1.42351197111511,0,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,1.19613236835183,0.66183396182839,2.13896307178452,1.03327858782185,2.36538575687089,1.17357238645754,1.43224823328345,5.45268591013696,2.17425708743405,3.16833006883652,0.948033361884535,0.405450430580328,0.616265742988964,0.649604114888975,1.07416017400489,1.58945083825012,1.44234539423963,1.18151621739662,1.51449674922221,1.37172251979,1.31074040677893,1.36441033035653,2.21287235772758,1.75315353272353,0.226730383615211,1.10992976687032,1.43542170575161,2.51826924546118,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,1.45302286617847,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,0.367687016900028,1.33348036680969,0.824140228955577,0.320919209591815,0.252697211763798,1.01391719956096,1.32038438970253,0.37456602987953,0.768301828858431,0.402048282689293,0.476293691283074,0.463537303779422,0,1.23625770240992,0.883193520806384,1.37147700954166,0.177475806159338,0.238436189947321,0.872078499793971,0.470546902076653,0.761531471025089,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.830445126869219,0.492522411877817,0.818462086339379,0.929621047115796,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,1.3390183244819,0.441182838239031,0 | |phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0.467225281191051,0.645616617207881,18.0209564354133,18.9592266320815,3.76679530096111,2.15384829287408,1.19840510951844,1.39872643870396,0,0.809901069559304,0.699561878128147,0.473193248037357,0.274228867211478,0.84877930359606,0.510259740906419,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,1.1554064790051,0.166234645358492,0.204169356262369,6.69650609179052,3.1253413780952,9.42342739152837,4.1176204162171,5.46436387966757,5.82612423637384,0.125896817975577,0.405507724878058,0.183546752161682,0,0.436050312760893,0,0,0,0,0.671130424230945,2.17608642603403,2.35265659399725,0.771778308107841,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.630974884054146,0,0,0.734944795289724,0.575072826109418,0.919218786610021,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0.284743361598206,0.372798891650601,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,1.21439728736295,0.608930956624282,0,0,0.587943535678524,0,0,0.433798070759735,2.65383165584962,0,0.662524555381181,0,1.86391761218122,0,0.83778682725382,0,0.718890747035522,0,1.01656181658452,0,0,0.502617408451458,0,0,0,0,0.611036183101898,0.497627882440372,0,0,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,0.816437989815934,1.15302348256365,0.468508622798644,0,1.5089759505299,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,1.0447564995665,0.411564272815887,0.59710280045548,0,1.54408744268829,1.42081749697796,0.621377317606506,0.703578179943289,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.0810688095458557,0,0.219550115291051,0,0,1.54356918568927,0.330418782983798,0,1.06644125267617,0.232236671860439,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.379335801906163,1.37098215131675,0,2.03651327845314,1.35766741017338,0.420814919341911,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.982794975566015,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.189491411770485,1.46668478797823,1.86719594352707,1.87752198630802,0.167506257441816,0.952174563544055,0.780534591431195,1.41871629695572,0.664394068946325,0.478364305972461,0,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0.655739781506702,0.504941854408746,1.57754109708128,1.56175497718655,1.72338718186239,0.955875191810208,0.445597348164788,0.849229592366497,2.02405350837447,1.75353514746787,1.58115111178609,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,1.45668381692989,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,0,1.26042765821917,0,0.643011105094777,0,0.178368817602071,0,0,2.11204537257339,0.21183207086382,0,0.16488625294148,1.13025098687134,0.422190474497091,0.358117032009409,0.492422699235184,0,0.18542530201051,0.341741761595705,0.206386867963223,0.925972636848558,0.753473828018764,0.683471138605126,0.228778173206523,1.5298058699447,0.979660166265606,0.276399947608848,0,1.42351197111511,0,0.324016022465404,0.627264888043406,0.436725127492355,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,1.19613236835183,0.66183396182839,2.13896307178452,1.03327858782185,2.36538575687089,1.17357238645754,1.43224823328345,5.45268591013696,2.17425708743405,3.16833006883652,0.948033361884535,0.405450430580328,0.616265742988964,0.649604114888975,1.07416017400489,1.58945083825012,1.44234539423963,1.18151621739662,1.51449674922221,1.37172251979,1.31074040677893,1.36441033035653,2.21287235772758,1.75315353272353,0.226730383615211,1.10992976687032,1.43542170575161,2.51826924546118,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,1.45302286617847,1.19707462020309,0.512200817262403,1.21553358534147,0.628839487883947,0.367687016900028,1.33348036680969,0.824140228955577,0.320919209591815,0.252697211763798,1.01391719956096,1.32038438970253,0.37456602987953,0.768301828858431,0.402048282689293,0.476293691283074,0.463537303779422,0,1.23625770240992,0.883193520806384,1.37147700954166,0.177475806159338,0.238436189947321,0.872078499793971,0.470546902076653,0.761531471025089,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.830445126869219,0.492522411877817,0.818462086339379,0.929621047115796,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,1.3390183244819,0.441182838239031,0 | ||
|short_description=p2@Cenpj | |short_description=p2@Cenpj | ||
}} | }} |
Latest revision as of 04:14, 26 September 2015
Short description: | p2@Cenpj |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cenpj_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 25bp_to_ENSMUST00000065302, NM_001014996, uc007ucb.2, uc007ucc.2_5end |
EntrezGene: | Cenpj |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.71e-09 | 9 |
alpha-beta T cell | 6.71e-09 | 9 |
immature T cell | 6.71e-09 | 9 |
mature T cell | 6.71e-09 | 9 |
immature alpha-beta T cell | 6.71e-09 | 9 |
thymocyte | 6.02e-08 | 6 |
double negative thymocyte | 6.02e-08 | 6 |
naive T cell | 6.02e-08 | 6 |
double-positive, alpha-beta thymocyte | 6.02e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 6.02e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.02e-08 | 6 |
DN4 thymocyte | 6.02e-08 | 6 |
DN1 thymic pro-T cell | 6.02e-08 | 6 |
DN2 thymocyte | 6.02e-08 | 6 |
DN3 thymocyte | 6.02e-08 | 6 |
immature single positive thymocyte | 6.02e-08 | 6 |
early T lineage precursor | 6.02e-08 | 6 |
mature CD4 single-positive thymocyte | 6.02e-08 | 6 |
resting double-positive thymocyte | 6.02e-08 | 6 |
double-positive blast | 6.02e-08 | 6 |
CD69-positive double-positive thymocyte | 6.02e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 6.02e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.02e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 6.02e-08 | 6 |
CD4-positive, alpha-beta T cell | 9.38e-08 | 8 |
T cell | 6.45e-07 | 11 |
pro-T cell | 6.45e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.10e-10 | 23 |
neck | 8.10e-10 | 23 |
respiratory system epithelium | 8.10e-10 | 23 |
hemolymphoid system gland | 8.10e-10 | 23 |
pharyngeal epithelium | 8.10e-10 | 23 |
thymic region | 8.10e-10 | 23 |
pharyngeal gland | 8.10e-10 | 23 |
entire pharyngeal arch endoderm | 8.10e-10 | 23 |
thymus primordium | 8.10e-10 | 23 |
early pharyngeal endoderm | 8.10e-10 | 23 |
pharynx | 3.20e-09 | 24 |
gland of gut | 3.20e-09 | 24 |
upper respiratory tract | 3.20e-09 | 24 |
chordate pharynx | 3.20e-09 | 24 |
pharyngeal arch system | 3.20e-09 | 24 |
pharyngeal region of foregut | 3.20e-09 | 24 |
segment of respiratory tract | 1.04e-07 | 27 |
anterior region of body | 2.88e-07 | 43 |
hemopoietic organ | 6.88e-07 | 29 |
immune organ | 6.88e-07 | 29 |
respiratory tract | 8.15e-07 | 41 |