FFCP PHASE1:Mm9::chr2:168781029..168781093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100502777,22722 | |EntrezGene=100502777,22722 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=A2AQR3,A2AQR4,A2AQR5 | |UniProt=A2AQR3,A2AQR4,A2AQR5 | ||
|association_with_transcript=0bp_to_ENSMUST00000109162,NM_009564,uc008obj.1,uc008obk.1,uc008obl.1,uc008obm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000109162,NM_009564,uc008obj.1,uc008obk.1,uc008obl.1,uc008obm.1_5end | ||
|cluster_id=chr2:168781029..168781093,- | |||
|description=CAGE_peak_2_at_LOC100502777_5end,CAGE_peak_2_at_Zfp64_5end | |description=CAGE_peak_2_at_LOC100502777_5end,CAGE_peak_2_at_Zfp64_5end | ||
|id=chr2:168781029..168781093,- | |id=chr2:168781029..168781093,- | ||
|ontology_enrichment_celltype=CL:0000988!3.87e-08!32;CL:0002032!3.87e-08!32;CL:0000037!3.87e-08!32;CL:0000566!3.87e-08!32;CL:0000837!3.87e-08!32;CL:0000838!1.70e-07!12;CL:0002320!1.76e-07!46;CL:0000134!1.76e-07!46;CL:0000084!7.02e-07!11;CL:0000827!7.02e-07!11 | |ontology_enrichment_celltype=CL:0000988!3.87e-08!32;CL:0002032!3.87e-08!32;CL:0000037!3.87e-08!32;CL:0000566!3.87e-08!32;CL:0000837!3.87e-08!32;CL:0000838!1.70e-07!12;CL:0002320!1.76e-07!46;CL:0000134!1.76e-07!46;CL:0000084!7.02e-07!11;CL:0000827!7.02e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.29e-08,32;CL:0002032,3.29e-08,32;CL:0000037,3.29e-08,32;CL:0000837,3.29e-08,32;CL:0002320,1.66e-07,46;CL:0000134,1.66e-07,46;CL:0000838,1.68e-07,12;CL:0000084,6.96e-07,11;CL:0000827,6.96e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!1.00e-09!27;UBERON:0001004!1.09e-09!42;UBERON:0000065!2.61e-09!41;UBERON:0002390!2.94e-09!45;UBERON:0003061!2.94e-09!45;UBERON:0003408!6.64e-09!24;UBERON:0002193!1.12e-08!48;UBERON:0006562!1.34e-08!24;UBERON:0001557!1.34e-08!24;UBERON:0001042!1.34e-08!24;UBERON:0008814!1.34e-08!24;UBERON:0009145!1.34e-08!24;UBERON:0002370!1.63e-08!23;UBERON:0000974!1.63e-08!23;UBERON:0004807!1.63e-08!23;UBERON:0005058!1.63e-08!23;UBERON:0003351!1.63e-08!23;UBERON:0009113!1.63e-08!23;UBERON:0003295!1.63e-08!23;UBERON:0009722!1.63e-08!23;UBERON:0005562!1.63e-08!23;UBERON:0007690!1.63e-08!23;UBERON:0002384!1.76e-07!46;UBERON:0004177!5.71e-07!29;UBERON:0000063!8.12e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.64e-10,27;UBERON:0001004,1.12e-09,42;UBERON:0002390,2.53e-09,45;UBERON:0003061,2.53e-09,45;UBERON:0000065,2.68e-09,41;UBERON:0003408,5.72e-09,24;UBERON:0002193,9.70e-09,48;UBERON:0002405,9.70e-09,48;UBERON:0006562,1.16e-08,24;UBERON:0001557,1.16e-08,24;UBERON:0001042,1.16e-08,24;UBERON:0008814,1.16e-08,24;UBERON:0009145,1.16e-08,24;UBERON:0002370,1.40e-08,23;UBERON:0000974,1.40e-08,23;UBERON:0004807,1.40e-08,23;UBERON:0005058,1.40e-08,23;UBERON:0003351,1.40e-08,23;UBERON:0009113,1.40e-08,23;UBERON:0003295,1.40e-08,23;UBERON:0009722,1.40e-08,23;UBERON:0005562,1.40e-08,23;UBERON:0007690,1.40e-08,23;UBERON:0002384,1.66e-07,46;UBERON:0004177,5.08e-07,29;UBERON:0005057,5.08e-07,29 | |||
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| 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| ||
|short_description=p2@LOC100502777,p2@Zfp64 | |short_description=p2@LOC100502777,p2@Zfp64 | ||
}} | }} |
Latest revision as of 05:34, 26 September 2015
Short description: | p2@LOC100502777, p2@Zfp64 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100502777_5end, CAGE_peak_2_at_Zfp64_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | 0bp_to_ENSMUST00000109162, NM_009564, uc008obj.1, uc008obk.1, uc008obl.1, uc008obm.1_5end |
EntrezGene: | 100502777,22722 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.29e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.29e-08 | 32 |
hematopoietic stem cell | 3.29e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.29e-08 | 32 |
connective tissue cell | 1.66e-07 | 46 |
mesenchymal cell | 1.66e-07 | 46 |
lymphoid lineage restricted progenitor cell | 1.68e-07 | 12 |
T cell | 6.96e-07 | 11 |
pro-T cell | 6.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 8.64e-10 | 27 |
respiratory system | 1.12e-09 | 42 |
hematopoietic system | 2.53e-09 | 45 |
blood island | 2.53e-09 | 45 |
respiratory tract | 2.68e-09 | 41 |
gland of gut | 5.72e-09 | 24 |
hemolymphoid system | 9.70e-09 | 48 |
immune system | 9.70e-09 | 48 |
pharynx | 1.16e-08 | 24 |
upper respiratory tract | 1.16e-08 | 24 |
chordate pharynx | 1.16e-08 | 24 |
pharyngeal arch system | 1.16e-08 | 24 |
pharyngeal region of foregut | 1.16e-08 | 24 |
thymus | 1.40e-08 | 23 |
neck | 1.40e-08 | 23 |
respiratory system epithelium | 1.40e-08 | 23 |
hemolymphoid system gland | 1.40e-08 | 23 |
pharyngeal epithelium | 1.40e-08 | 23 |
thymic region | 1.40e-08 | 23 |
pharyngeal gland | 1.40e-08 | 23 |
entire pharyngeal arch endoderm | 1.40e-08 | 23 |
thymus primordium | 1.40e-08 | 23 |
early pharyngeal endoderm | 1.40e-08 | 23 |
connective tissue | 1.66e-07 | 46 |
hemopoietic organ | 5.08e-07 | 29 |
immune organ | 5.08e-07 | 29 |