FFCP PHASE1:Mm9::chr17:36117142..36117180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75210 | |EntrezGene=75210 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1398 | |||
|TSSclassifier=NA | |||
|UniProt=Q811B5 | |UniProt=Q811B5 | ||
|association_with_transcript=0bp_to_ENSMUST00000055454_5end | |association_with_transcript=0bp_to_ENSMUST00000055454_5end | ||
|cluster_id=chr17:36117142..36117180,- | |||
|description=CAGE_peak_2_at_Prr3_5end | |description=CAGE_peak_2_at_Prr3_5end | ||
|id=chr17:36117142..36117180,- | |id=chr17:36117142..36117180,- | ||
|ontology_enrichment_celltype=CL:0000988!4.42e-09!32;CL:0002032!4.42e-09!32;CL:0000037!4.42e-09!32;CL:0000566!4.42e-09!32;CL:0000837!4.42e-09!32;CL:0000838!1.00e-08!12;CL:0000542!1.05e-08!13;CL:0000051!1.05e-08!13;CL:0000084!4.68e-08!11;CL:0000827!4.68e-08!11;CL:0000791!1.98e-07!9;CL:0000789!1.98e-07!9;CL:0002420!1.98e-07!9;CL:0002419!1.98e-07!9;CL:0000790!1.98e-07!9;CL:0000624!9.62e-07!8 | |ontology_enrichment_celltype=CL:0000988!4.42e-09!32;CL:0002032!4.42e-09!32;CL:0000037!4.42e-09!32;CL:0000566!4.42e-09!32;CL:0000837!4.42e-09!32;CL:0000838!1.00e-08!12;CL:0000542!1.05e-08!13;CL:0000051!1.05e-08!13;CL:0000084!4.68e-08!11;CL:0000827!4.68e-08!11;CL:0000791!1.98e-07!9;CL:0000789!1.98e-07!9;CL:0002420!1.98e-07!9;CL:0002419!1.98e-07!9;CL:0000790!1.98e-07!9;CL:0000624!9.62e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.40e-10,32;CL:0002032,9.40e-10,32;CL:0000037,9.40e-10,32;CL:0000837,9.40e-10,32;CL:0000838,5.61e-09,12;CL:0000542,5.86e-09,13;CL:0000051,5.86e-09,13;CL:0000084,2.76e-08,11;CL:0000827,2.76e-08,11;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000738,4.17e-07,17;CL:0002087,4.17e-07,17;CL:0000624,6.29e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-11!45;UBERON:0003061!1.73e-11!45;UBERON:0002193!3.79e-10!48;UBERON:0004177!5.56e-09!29;UBERON:0002370!1.97e-08!23;UBERON:0000974!1.97e-08!23;UBERON:0004807!1.97e-08!23;UBERON:0005058!1.97e-08!23;UBERON:0003351!1.97e-08!23;UBERON:0009113!1.97e-08!23;UBERON:0003295!1.97e-08!23;UBERON:0009722!1.97e-08!23;UBERON:0005562!1.97e-08!23;UBERON:0007690!1.97e-08!23;UBERON:0003408!5.35e-08!24;UBERON:0006562!2.06e-07!24;UBERON:0001557!2.06e-07!24;UBERON:0001042!2.06e-07!24;UBERON:0008814!2.06e-07!24;UBERON:0009145!2.06e-07!24 | |ontology_enrichment_uberon=UBERON:0002390!1.73e-11!45;UBERON:0003061!1.73e-11!45;UBERON:0002193!3.79e-10!48;UBERON:0004177!5.56e-09!29;UBERON:0002370!1.97e-08!23;UBERON:0000974!1.97e-08!23;UBERON:0004807!1.97e-08!23;UBERON:0005058!1.97e-08!23;UBERON:0003351!1.97e-08!23;UBERON:0009113!1.97e-08!23;UBERON:0003295!1.97e-08!23;UBERON:0009722!1.97e-08!23;UBERON:0005562!1.97e-08!23;UBERON:0007690!1.97e-08!23;UBERON:0003408!5.35e-08!24;UBERON:0006562!2.06e-07!24;UBERON:0001557!2.06e-07!24;UBERON:0001042!2.06e-07!24;UBERON:0008814!2.06e-07!24;UBERON:0009145!2.06e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-12,45;UBERON:0003061,1.69e-12,45;UBERON:0002193,3.13e-11,48;UBERON:0002405,3.13e-11,48;UBERON:0004177,9.36e-10,29;UBERON:0005057,9.36e-10,29;UBERON:0002370,3.16e-09,23;UBERON:0000974,3.16e-09,23;UBERON:0004807,3.16e-09,23;UBERON:0005058,3.16e-09,23;UBERON:0003351,3.16e-09,23;UBERON:0009113,3.16e-09,23;UBERON:0003295,3.16e-09,23;UBERON:0009722,3.16e-09,23;UBERON:0005562,3.16e-09,23;UBERON:0007690,3.16e-09,23;UBERON:0000077,6.05e-09,35;UBERON:0003408,9.50e-09,24;UBERON:0006562,2.61e-08,24;UBERON:0001557,2.61e-08,24;UBERON:0001042,2.61e-08,24;UBERON:0008814,2.61e-08,24;UBERON:0009145,2.61e-08,24;UBERON:0000926,4.33e-08,120;UBERON:0004120,4.33e-08,120;UBERON:0006603,4.33e-08,120;UBERON:0007811,4.69e-08,36;UBERON:0000153,1.28e-07,43 | |||
|phase1_expression=1.44133962394315,0,0.454999239389536,0.30246421130683,0,0.503637815735669,0.233612640595526,6.19791952519566,15.20518199238,12.1713553687437,8.38968044304974,5.98291192465023,7.01922992717943,9.00430144915673,1.99865857089398,1.82227740650843,0.699561878128147,6.94016763788123,6.7186072466812,5.09267582157636,0.425216450755349,4.17021995043718,2.61199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,2.54012269383853,0.61506478758457,0,0.577703239502549,0.166234645358492,0.612508068787107,1.67412652294763,2.3440060335714,2.61761871986899,5.29408339227913,4.78131839470912,0.971020706062307,0.377690453926732,0.304130793658544,0.734187008646726,0.782391344348039,1.09012578190223,0.659058548203415,1.1665793944457,0.699932108126813,2.87505128729943,9.06026072711776,14.5072428402269,12.4354705682712,0.771778308107841,0.286533439938757,0.515672092277442,2.22548106945558,3.70293685490423,1.90149421051854,2.03306719241479,0.889294796111139,2.6996991518442,3.9554654502679,4.2628806896766,2.09720077362883,3.45796474789399,1.03689612308478,1.4850653216486,0.630974884054146,1.99955689082663,4.19650227808066,1.46988959057945,1.91690942036473,2.75765635983006,2.20231761998777,1.65993539510744,1.38245879930619,2.1101806036831,2.65314166446988,1.56274011167028,1.95428099300967,1.68828783009504,2.75036845998258,2.65165726926301,2.56269025438385,3.16879057903011,0.832988126665025,0.226714680320357,1.44932244350839,0,1.3599426674155,0.539703191637817,0,0.448026887097336,0.140444420131752,0.511290967734173,0.259786004602869,1.41335829804136,2.11265129665021,1.28326477414318,0,0,0.216491041011214,0,0,0.11418387971906,2.33044095282455,1.7813056687779,1.56136794089522,2.13125834818499,1.38369298353635,1.3565037649736,2.70454026412121,0.628332956648377,1.48316980640624,0.722996784599558,1.76922110389975,0.485300549842228,1.76673214768315,2.90925151881133,0,0.292780797011547,0.628340120440365,1.02182822083437,6.23038647430785,5.39912457894067,6.22644112658017,1.64769703345305,1.83000241127451,4.52355667606312,0.869121600961382,1.02286182932132,3.1168206683934,1.46017136760982,2.95334155165917,1.49288364732112,2.27450482590307,0.841767423545896,2.73252930221678,1.60931473103431,1.98068342785884,1.80845781402858,2.51735046859913,2.69038812598185,2.43624483855295,1.81092359517311,0.431135985865684,3.21480336285293,1.75951124163949,1.31517439456545,2.50242524303038,1.39300866608867,1.85203922767149,2.38841120182192,9.12877143507205,5.1469581422943,2.84163499395593,1.65700618028402,1.40715635988658,0.900310307305074,0.946978942340841,1.57411385397923,1.3884040159864,1.16266972375204,1.60964040839772,0.467061369468678,1.6455984991348,0.492502392237286,0.405344047729279,0.438599962275997,0.658650345873152,0.939444931322602,0.630869845692382,1.9551876352064,0.991256348951394,0,2.13288250535234,2.32236671860439,1.28867461322093,2.01683524623343,1.77902435075896,0.760902504450237,0.949058123089023,0.658795818896044,1.00534083520108,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,0.796565093017469,2.0863469104839,2.05647322697512,2.25415471346161,1.4255592949172,2.32742984601151,1.47285221769669,1.96033265085198,0.885660887877613,0.941992367048249,1.1105744752962,0.296452627087149,0.333690211432188,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,1.2731292589071,0.287696137450811,0.810676133875177,0.823684239564244,1.43768206527355,0.372140947668503,0.936113019343682,1.01031551178845,0.538192240565737,0.964887042726734,2.03228509183265,2.08440552947533,1.46668478797823,1.18821560042632,2.81628297946203,1.34005005953453,1.19021820443007,0.975668239288994,1.7339865851681,1.32878813789265,2.07291199254733,2.29408640602033,1.20879487306127,1.44649058581512,0,0.54390568381871,0.491764273019036,0.827810238914197,0.642202359951168,0.820481806145422,0.655739781506702,0.757412781613119,1.89304931649754,1.95219372148319,1.72338718186239,2.15071918157297,2.67358408898873,3.11384183867716,1.21443210502468,2.92255857911312,1.97643888973262,2.89189184779626,1.27746076687442,4.09550888434687,3.74640006513225,2.47455184458803,0,0.971122544619926,2.11626489875326,0.943025398779491,0.295301892880773,1.53717573971964,1.55056975900933,1.81766864738753,1.06949213515416,0.948110273807448,1.05418608574999,0,3.06395645178409,1.26042765821917,4.52755393239641,2.35770738534752,2.12808280370728,2.14042581122485,1.48094118541909,5.17590413494819,2.58138878870081,4.44847348814022,0.882113592219848,1.81374878235628,1.13025098687134,1.32688434841943,1.79058516004705,1.64140899745061,0.582961673259701,1.11255181206306,2.56306321196779,2.27025554759545,2.40752885580625,1.13021074202815,1.77702496037333,4.34678529092393,4.07948231985253,5.03825228365169,5.38979897837253,0.954670618015114,1.42351197111511,1.62655573701479,0.756037385752609,2.09088296014469,0.436725127492355,0.404593039154462,1.32245529160537,0.523511883968059,0.90730481304255,1.24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| ||
|short_description=p2@Prr3 | |short_description=p2@Prr3 | ||
}} | }} |
Latest revision as of 11:05, 26 September 2015
Short description: | p2@Prr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1398 |
Association with transcript: | 0bp_to_ENSMUST00000055454_5end |
EntrezGene: | Prr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.40e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.40e-10 | 32 |
hematopoietic stem cell | 9.40e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.40e-10 | 32 |
lymphoid lineage restricted progenitor cell | 5.61e-09 | 12 |
lymphocyte | 5.86e-09 | 13 |
common lymphoid progenitor | 5.86e-09 | 13 |
T cell | 2.76e-08 | 11 |
pro-T cell | 2.76e-08 | 11 |
mature alpha-beta T cell | 1.23e-07 | 9 |
alpha-beta T cell | 1.23e-07 | 9 |
immature T cell | 1.23e-07 | 9 |
mature T cell | 1.23e-07 | 9 |
immature alpha-beta T cell | 1.23e-07 | 9 |
leukocyte | 4.17e-07 | 17 |
nongranular leukocyte | 4.17e-07 | 17 |
CD4-positive, alpha-beta T cell | 6.29e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.69e-12 | 45 |
blood island | 1.69e-12 | 45 |
hemolymphoid system | 3.13e-11 | 48 |
immune system | 3.13e-11 | 48 |
hemopoietic organ | 9.36e-10 | 29 |
immune organ | 9.36e-10 | 29 |
thymus | 3.16e-09 | 23 |
neck | 3.16e-09 | 23 |
respiratory system epithelium | 3.16e-09 | 23 |
hemolymphoid system gland | 3.16e-09 | 23 |
pharyngeal epithelium | 3.16e-09 | 23 |
thymic region | 3.16e-09 | 23 |
pharyngeal gland | 3.16e-09 | 23 |
entire pharyngeal arch endoderm | 3.16e-09 | 23 |
thymus primordium | 3.16e-09 | 23 |
early pharyngeal endoderm | 3.16e-09 | 23 |
mixed endoderm/mesoderm-derived structure | 6.05e-09 | 35 |
gland of gut | 9.50e-09 | 24 |
pharynx | 2.61e-08 | 24 |
upper respiratory tract | 2.61e-08 | 24 |
chordate pharynx | 2.61e-08 | 24 |
pharyngeal arch system | 2.61e-08 | 24 |
pharyngeal region of foregut | 2.61e-08 | 24 |
mesoderm | 4.33e-08 | 120 |
mesoderm-derived structure | 4.33e-08 | 120 |
presumptive mesoderm | 4.33e-08 | 120 |
craniocervical region | 4.69e-08 | 36 |
anterior region of body | 1.28e-07 | 43 |