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FFCP PHASE1:Mm9::chr6:112996298..112996363,+: Difference between revisions

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{{FFCP|EntrezGene=14911|HGNC=|UniProt=P97770|association_with_transcript=0bp_to_ENSMUST00000137396,ENSMUST00000145054,ENSMUST00000152795,NM_008188,uc009dek.1,uc009del.1_5end|description=CAGE_peak_1_at_Thumpd3_5end|id=chr6:112996298..112996363,+|ontology_enrichment_celltype=CL:0000988!6.80e-08!32;CL:0002032!6.80e-08!32;CL:0000037!6.80e-08!32;CL:0000566!6.80e-08!32;CL:0000837!6.80e-08!32;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000838!1.42e-07!12;CL:0000084!3.72e-07!11;CL:0000827!3.72e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000542,1.19e-07,13;CL:0000051,1.19e-07,13;CL:0000838,1.42e-07,12;CL:0000084,3.72e-07,11;CL:0000827,3.72e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!8.29e-10!27;UBERON:0002193!1.68e-09!48;UBERON:0004177!2.93e-09!29;UBERON:0006562!3.14e-09!24;UBERON:0001557!3.14e-09!24;UBERON:0001042!3.14e-09!24;UBERON:0008814!3.14e-09!24;UBERON:0009145!3.14e-09!24;UBERON:0002390!6.32e-09!45;UBERON:0003061!6.32e-09!45;UBERON:0002370!7.16e-09!23;UBERON:0000974!7.16e-09!23;UBERON:0004807!7.16e-09!23;UBERON:0005058!7.16e-09!23;UBERON:0003351!7.16e-09!23;UBERON:0009113!7.16e-09!23;UBERON:0003295!7.16e-09!23;UBERON:0009722!7.16e-09!23;UBERON:0005562!7.16e-09!23;UBERON:0007690!7.16e-09!23;UBERON:0003408!1.71e-08!24;UBERON:0002405!2.23e-08!70;UBERON:0005057!2.93e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.29e-10,27;UBERON:0000077,9.86e-10,35;UBERON:0007811,1.57e-09,36;UBERON:0002193,1.68e-09,48;UBERON:0002405,1.68e-09,48;UBERON:0004177,2.93e-09,29;UBERON:0005057,2.93e-09,29;UBERON:0006562,3.14e-09,24;UBERON:0001557,3.14e-09,24;UBERON:0001042,3.14e-09,24;UBERON:0008814,3.14e-09,24;UBERON:0009145,3.14e-09,24;UBERON:0002390,6.32e-09,45;UBERON:0003061,6.32e-09,45;UBERON:0002370,7.16e-09,23;UBERON:0000974,7.16e-09,23;UBERON:0004807,7.16e-09,23;UBERON:0005058,7.16e-09,23;UBERON:0003351,7.16e-09,23;UBERON:0009113,7.16e-09,23;UBERON:0003295,7.16e-09,23;UBERON:0009722,7.16e-09,23;UBERON:0005562,7.16e-09,23;UBERON:0007690,7.16e-09,23;UBERON:0003408,1.71e-08,24;UBERON:0000153,3.29e-08,43|phase1_expression=18.2569685699465,9.42233600626275,12.739978702907,6.0492842261366,9.01612313903425,15.7806515597176,18.9226238882376,42.0942034419539,48.0089542537184,60.6227123173963,128.071040232678,98.2792998822544,41.601777373283,42.3114747707947,26.648780945253,29.7638643063044,25.1842276126133,38.9595774217424,39.4889568784528,27.585327366872,26.1082900763784,24.226992093016,31.8663742749501,21.4389846543165,22.0232909824483,13.2073351746455,14.2151458732495,17.2376986148711,22.2327400763957,19.1542898617547,13.3038306393183,16.5107975099504,15.9916844771988,15.8481681015439,38.7061170466708,32.083286554189,34.5046212083404,9.62622750694888,13.2827008569046,14.1351410872926,8.82347232046521,9.56263678941824,15.0508209439658,17.3737608806297,16.9299475136589,21.2914232507551,1.56478268869608,6.32272953503295,3.07560655828261,6.61061656852564,3.77963338388479,7.18762821824858,28.3552604237574,23.211588544363,28.9040667262519,12.8629718017974,12.0344044774278,15.9858348606007,6.67644320836673,8.46385566835253,8.87363964908651,6.43804610931351,2.66788438833342,9.44894703145469,8.89979726310277,7.104801149461,5.99200221036809,2.30530983192933,14.2054768862614,10.1254453748768,8.83364837675805,6.85562362569129,6.40518768759679,9.30930074033651,9.00947427571422,6.43453150627015,12.1127469099328,14.6840438797966,13.5173749265494,5.40733779693795,8.23388792421687,8.85552729946492,10.6089539620525,15.757353080887,18.3357897332172,12.0797720044204,19.0778052270798,13.047961207771,45.7386207732432,25.6187588762003,13.3337664802772,27.5335640634044,11.5595126730318,15.6513925574967,11.695975514058,15.6809410484067,24.0159958425296,18.7473354835864,24.1600984280668,18.0203183000274,22.9574774235989,16.6824420638613,5.09610479413291,14.2213340630666,24.8964697162896,22.8023878927589,25.2762222507392,18.2694207550496,44.2783781036664,22.860089415983,17.5220180033797,17.6589977421042,19.832932764021,22.9098413639986,21.518733405834,21.4889871173745,24.2251068379686,19.665512541108,24.7690954545965,16.8237523945306,20.0965781798958,19.8798853785441,24.2309289583559,12.296793474485,14.4518227701284,14.0501380364725,20.967646788536,28.1954283566902,24.7786942792476,15.5782264981016,26.5350349634803,28.6491922817331,19.8159725019195,20.9686675010871,19.5320761885986,19.1444690419954,16.5998163076016,19.0342665033442,28.5576717030052,24.2008134269445,25.893968149578,26.6686441142829,23.0479526150847,25.6198190320716,21.8397162275762,22.9323559309881,17.9907311154679,23.2833033665114,12.7185115830377,21.1798809787958,16.8913079197391,17.0972671293508,21.6876854395966,20.89512999133,29.4268455063359,22.0928036168527,40.7283648641676,27.7935739683892,23.5855704498342,18.8484453007307,18.7620847984877,20.7071370680167,18.4660893756464,19.0861304794982,22.0601971428951,18.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14911
|HGNC=
|TSSclassifier=NA
|UniProt=P97770
|association_with_transcript=0bp_to_ENSMUST00000137396,ENSMUST00000145054,ENSMUST00000152795,NM_008188,uc009dek.1,uc009del.1_5end
|cluster_id=chr6:112996298..112996363,+
|description=CAGE_peak_1_at_Thumpd3_5end
|id=chr6:112996298..112996363,+
|ontology_enrichment_celltype=CL:0000988!6.80e-08!32;CL:0002032!6.80e-08!32;CL:0000037!6.80e-08!32;CL:0000566!6.80e-08!32;CL:0000837!6.80e-08!32;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000838!1.42e-07!12;CL:0000084!3.72e-07!11;CL:0000827!3.72e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000542,1.19e-07,13;CL:0000051,1.19e-07,13;CL:0000838,1.42e-07,12;CL:0000084,3.72e-07,11;CL:0000827,3.72e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000072!8.29e-10!27;UBERON:0002193!1.68e-09!48;UBERON:0004177!2.93e-09!29;UBERON:0006562!3.14e-09!24;UBERON:0001557!3.14e-09!24;UBERON:0001042!3.14e-09!24;UBERON:0008814!3.14e-09!24;UBERON:0009145!3.14e-09!24;UBERON:0002390!6.32e-09!45;UBERON:0003061!6.32e-09!45;UBERON:0002370!7.16e-09!23;UBERON:0000974!7.16e-09!23;UBERON:0004807!7.16e-09!23;UBERON:0005058!7.16e-09!23;UBERON:0003351!7.16e-09!23;UBERON:0009113!7.16e-09!23;UBERON:0003295!7.16e-09!23;UBERON:0009722!7.16e-09!23;UBERON:0005562!7.16e-09!23;UBERON:0007690!7.16e-09!23;UBERON:0003408!1.71e-08!24;UBERON:0002405!2.23e-08!70;UBERON:0005057!2.93e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.29e-10,27;UBERON:0000077,9.86e-10,35;UBERON:0007811,1.57e-09,36;UBERON:0002193,1.68e-09,48;UBERON:0002405,1.68e-09,48;UBERON:0004177,2.93e-09,29;UBERON:0005057,2.93e-09,29;UBERON:0006562,3.14e-09,24;UBERON:0001557,3.14e-09,24;UBERON:0001042,3.14e-09,24;UBERON:0008814,3.14e-09,24;UBERON:0009145,3.14e-09,24;UBERON:0002390,6.32e-09,45;UBERON:0003061,6.32e-09,45;UBERON:0002370,7.16e-09,23;UBERON:0000974,7.16e-09,23;UBERON:0004807,7.16e-09,23;UBERON:0005058,7.16e-09,23;UBERON:0003351,7.16e-09,23;UBERON:0009113,7.16e-09,23;UBERON:0003295,7.16e-09,23;UBERON:0009722,7.16e-09,23;UBERON:0005562,7.16e-09,23;UBERON:0007690,7.16e-09,23;UBERON:0003408,1.71e-08,24;UBERON:0000153,3.29e-08,43
|phase1_expression=18.2569685699465,9.42233600626275,12.739978702907,6.0492842261366,9.01612313903425,15.7806515597176,18.9226238882376,42.0942034419539,48.0089542537184,60.6227123173963,128.071040232678,98.2792998822544,41.601777373283,42.3114747707947,26.648780945253,29.7638643063044,25.1842276126133,38.9595774217424,39.4889568784528,27.585327366872,26.1082900763784,24.226992093016,31.8663742749501,21.4389846543165,22.0232909824483,13.2073351746455,14.2151458732495,17.2376986148711,22.2327400763957,19.1542898617547,13.3038306393183,16.5107975099504,15.9916844771988,15.8481681015439,38.7061170466708,32.083286554189,34.5046212083404,9.62622750694888,13.2827008569046,14.1351410872926,8.82347232046521,9.56263678941824,15.0508209439658,17.3737608806297,16.9299475136589,21.2914232507551,1.56478268869608,6.32272953503295,3.07560655828261,6.61061656852564,3.77963338388479,7.18762821824858,28.3552604237574,23.211588544363,28.9040667262519,12.8629718017974,12.0344044774278,15.9858348606007,6.67644320836673,8.46385566835253,8.87363964908651,6.43804610931351,2.66788438833342,9.44894703145469,8.89979726310277,7.104801149461,5.99200221036809,2.30530983192933,14.2054768862614,10.1254453748768,8.83364837675805,6.85562362569129,6.40518768759679,9.30930074033651,9.00947427571422,6.43453150627015,12.1127469099328,14.6840438797966,13.5173749265494,5.40733779693795,8.23388792421687,8.85552729946492,10.6089539620525,15.757353080887,18.3357897332172,12.0797720044204,19.0778052270798,13.047961207771,45.7386207732432,25.6187588762003,13.3337664802772,27.5335640634044,11.5595126730318,15.6513925574967,11.695975514058,15.6809410484067,24.0159958425296,18.7473354835864,24.1600984280668,18.0203183000274,22.9574774235989,16.6824420638613,5.09610479413291,14.2213340630666,24.8964697162896,22.8023878927589,25.2762222507392,18.2694207550496,44.2783781036664,22.860089415983,17.5220180033797,17.6589977421042,19.832932764021,22.9098413639986,21.518733405834,21.4889871173745,24.2251068379686,19.665512541108,24.7690954545965,16.8237523945306,20.0965781798958,19.8798853785441,24.2309289583559,12.296793474485,14.4518227701284,14.0501380364725,20.967646788536,28.1954283566902,24.7786942792476,15.5782264981016,26.5350349634803,28.6491922817331,19.8159725019195,20.9686675010871,19.5320761885986,19.1444690419954,16.5998163076016,19.0342665033442,28.5576717030052,24.2008134269445,25.893968149578,26.6686441142829,23.0479526150847,25.6198190320716,21.8397162275762,22.9323559309881,17.9907311154679,23.2833033665114,12.7185115830377,21.1798809787958,16.8913079197391,17.0972671293508,21.6876854395966,20.89512999133,29.4268455063359,22.0928036168527,40.7283648641676,27.7935739683892,23.5855704498342,18.8484453007307,18.7620847984877,20.7071370680167,18.4660893756464,19.0861304794982,22.0601971428951,18.3701816352822,17.9743178937745,22.8860071039652,20.2408615393581,19.7000956894914,19.9429271482805,21.0527981892479,23.4918623361424,17.7152472763691,21.449574753541,30.6655744890268,14.2080076683033,15.8670339998127,23.674995809411,27.6361639513922,20.2321914275687,20.3700359869576,20.6811580775729,21.3052701246066,14.2358718463353,22.8931547066375,26.3901969240283,27.65494961372,22.0309418444606,19.7740269903929,21.18152888772,20.7106924184542,14.035424670528,17.708519454508,20.2873924211545,19.3468761453049,16.4859614092482,18.1651773515925,17.706230394792,19.7797598292667,16.4848664233444,15.5480426541469,22.8268522857105,31.7005700860579,27.5182593158484,26.9834534861824,23.1260538382893,24.6000702947465,22.6617008085464,15.247895284893,24.3202840162553,21.9649130550465,11.5014565221884,20.8398930694362,26.5232022147376,24.2475722829227,22.2452792767171,17.3679667690812,21.0618636789929,21.0335467065238,22.6521317254416,19.6904299499218,19.9486711045227,16.5831194867398,10.4739201989846,13.6593553500459,13.8718926813448,13.5093460685753,15.1482030224613,18.8442811923099,20.0314578964439,14.7542039753142,24.1266054302836,26.1074728232981,23.6046851049137,24.5583704211212,23.6009367282054,21.8013737061498,18.0328439914343,13.8859009962405,18.9304931649754,24.9880796349849,17.2338718186239,23.1799734013975,23.8394581268162,22.3630459323178,20.6453457854196,21.0424217696145,25.693705566524,18.315315036043,23.1362338889478,10.6839362200353,19.0577742443684,19.6314446337317,17.2568679841952,25.2491861601181,17.8370898609203,19.4263232148575,12.4026795009925,17.8312385807478,19.1236936944484,24.7202936044704,23.5288269733916,22.4386098134429,27.4088382294997,15.470331487228,14.6389030474129,21.7873923777885,10.8661294377514,22.2910516432856,21.1034878034306,16.2315624017884,22.2141177812863,11.2652031172402,23.467170806371,24.3606881493393,24.4786521841008,30.8337293000568,24.3811284310817,32.8102311609168,31.514298816828,35.6185752446783,21.8610627472388,22.6218868452822,26.4849865236672,11.9704383418669,20.0010089559289,27.1250578086755,31.1662839203937,28.3684934776088,19.8874763092811,21.272620753196,17.4131966993574,17.184071124272,16.6076396630096,18.7053909756701,20.7370254377858,23.208800857606,22.7097066296025,22.3874814998802,20.91132429851,21.9874991266585,28.3856791509026,19.2615187056947,105.974272472628,17.7924689792335,21.6750622498798,18.8617652693726,17.5657359929714,17.7403931765317,20.1854450470697,17.5775919539333,20.7621501962907,49.2831606485052,58.1820612640888,23.068811805857,28.1788049253328,32.5593734212502,39.7557718312053,33.1199386984841,31.7890167650024,35.5778530579108,34.2639703045019,38.8720832300368,33.7596153481649,33.3734672802942,30.8941481945015,30.1143064334231,27.3491951104871,26.7541852665949,25.5283846380174,28.2598648319848,25.3505770709758,25.1146472241848,13.8885031833875,20.1466786693992,28.2966260384367,25.0786052017682,15.8130515932779,20.714635642823,28.6447756719698,16.1541991403066,15.0718154349541,19.6402413321322,20.925697507186,18.9134905354173,19.938265995305,13.4617681055473,18.2665731748151,24.7395421508639,25.6100408631201,19.2054306483952,16.9786661728666,15.8105417267012,15.7795176739147,21.0155758383672,15.7250412699989,18.4468964587572,18.5039888919875,16.4104917005886,16.8554713445788,16.4544641680514,18.7813983484855,17.1465728861907,15.7602683285003,21.2200142510076,16.4834360321323,18.5470639369341,20.2292858907395,18.1025322282524,15.9752247264705,22.2380017447463,18.2572198005741,17.007536186227,20.4879329617505,22.6239951836545,20.2348129630334,23.0068331379673,19.4561429723646,17.139779933348,24.1446315470117,20.1417893541756,15.8183421004536,11.2414760072076,18.2466654587419,20.6276211886366,16.0682198937828,19.6326363016369,19.9406338633562
|short_description=p1@Thumpd3
}}

Latest revision as of 11:13, 26 September 2015

Short description:p1@Thumpd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Thumpd3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000137396, ENSMUST00000145054, ENSMUST00000152795, NM_008188, uc009dek.1, uc009del.1_5end
EntrezGene:Thumpd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Thumpd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.78
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E942.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E748.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F260.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6128.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F198.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E441.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E842.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A238.96
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.02
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I217.24
Ileum epithelium, pool1.CNhs13199.10252-104B922.23
Ileum epithelium, pool2.CNhs13232.10253-104C119.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F538.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F632.08
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A128.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D945.74
Mouse Schwann, donor2.CNhs12573.11746-123F925.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F727.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G325.28
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.27
accessory axillary lymph node, adult.CNhs10475.1063-29H944.28
adrenal gland, adult.CNhs10508.49-24D722.86
adrenal gland, embryo E14.CNhs11038.406-44C517.52
adrenal gland, embryo E16.CNhs11004.1254-43D617.66
adrenal gland, embryo E17.CNhs11043.1263-45I119.83
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C121.52
adrenal gland, neonate N25.CNhs11223.1377-27I321.49
amnion, adult pregnant day17.5.CNhs10488.583-22A824.23
aorta, adult.CNhs10498.46-23H119.67
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F516.82
bone (os femoris), neonate N16.CNhs11225.1525-43A620.10
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.78
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F128.65
cortex, adult.CNhs10473.12-14D519.82
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B219.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.03
epididymis, adult.CNhs10490.58-23B228.56
eyeball, adult.CNhs10484.31-12G424.20
eyeball, embryo E12.CNhs11016.345-16C625.89
eyeball, embryo E14.CNhs10521.399-16E226.67
eyeball, embryo E15.CNhs10593.426-16C923.05
eyeball, embryo E17.CNhs11023.1261-18D425.62
eyeball, neonate N00.CNhs11207.633-15C621.84
eyeball, neonate N01.CNhs11140.1532-43E722.93
eyeball, neonate N02.CNhs11205.1551-44G817.99
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E212.72
forelimb, embryo E12.CNhs10600.359-14H221.18
forelimb, embryo E13.CNhs10589.384-1E216.89
forelimb, embryo E14.CNhs10577.413-26A817.10
forelimb, embryo E15.CNhs11007.437-20E721.69
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B529.43
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.73
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.59
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F518.76
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D418.47
heart, embryo E15.CNhs11017.431-16C819.09
heart, embryo E16.CNhs11021.457-17C622.06
heart, embryo E17.CNhs11025.479-18E518.37
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E322.89
heart, neonate N03.CNhs11221.1349-25I220.24
heart, neonate N10.CNhs11118.749-24G119.70
heart, neonate N16.CNhs11209.782-15G119.94
heart, neonate N20.CNhs11127.821-26I621.05
heart, neonate N25.CNhs11196.1351-25D323.49
heart, neonate N30.CNhs11202.1390-42D217.72
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G130.67
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A315.87
intestine, embryo E12.CNhs11019.1251-16I523.67
intestine, embryo E13.CNhs11010.381-16D527.64
intestine, embryo E15.CNhs10602.976-16D820.23
intestine, embryo E16.CNhs10585.463-22H420.37
intestine, embryo E17.CNhs10582.482-18D320.68
intestine, embryo E18.CNhs10526.1289-20F721.31
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E922.89
intestine, neonate N06.CNhs11102.688-20B826.39
intestine, neonate N07.CNhs11095.720-20F227.65
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E321.18
intestine, neonate N30.CNhs11131.1384-42G120.71
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F817.71
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C716.49
kidney, neonate N00.CNhs11214.646-21G718.17
kidney, neonate N10.CNhs11206.758-6D517.71
kidney, neonate N20.CNhs11113.832-19I119.78
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H115.55
liver, adult pregnant day01.CNhs10466.508-5B222.83
liver, embryo E12.CNhs10601.355-15F831.70
liver, embryo E13.CNhs10524.378-3H627.52
liver, embryo E14.CNhs10594.409-16E126.98
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F524.60
liver, embryo E17.CNhs10510.481-18A322.66
liver, embryo E18.CNhs10579.499-43G415.25
liver, neonate N00.CNhs11117.641-24F424.32
liver, neonate N03.CNhs11123.1345-25G221.96
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H220.84
liver, neonate N10.CNhs11115.751-24B926.52
liver, neonate N20.CNhs11220.823-25A324.25
liver, neonate N25.CNhs11198.1368-26H122.25
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B121.06
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F822.65
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A616.58
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E513.87
lung, neonate N07.CNhs11111.715-19A313.51
lung, neonate N10.CNhs11219.750-23E615.15
lung, neonate N20.CNhs11109.822-18A418.84
lung, neonate N25.CNhs11119.1359-25C720.03
lung, neonate N30.CNhs11133.1394-42H214.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.11
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H224.56
medulla oblongata, adult.CNhs10477.17-12C223.60
medulla oblongata, neonate N30.CNhs11200.1396-42A321.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.99
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.69
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I723.14
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I419.06
oviduct, adult pregnant day01.CNhs10500.988-6G619.63
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E519.43
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G919.12
pancreas, neonate N01.CNhs11138.1531-43D724.72
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B622.44
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E621.79
pituitary gland, embryo E13.CNhs11009.370-44C710.87
pituitary gland, embryo E14.CNhs11037.398-44A522.29
pituitary gland, embryo E15.CNhs10592.427-16B921.10
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F522.21
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I723.47
placenta, adult pregnant day17.CNhs10464.577-18G324.36
prostate, adult.CNhs10470.859-1F824.48
skin, adult.CNhs10492.30-1C330.83
skin, neonate N00.CNhs11124.650-25G424.38
skin, neonate N03.CNhs11215.662-22H332.81
skin, neonate N06.CNhs11097.693-20I531.51
skin, neonate N10.CNhs11108.762-6C435.62
small intestine, neonate N16.CNhs11114.790-21I121.86
spinal cord, adult.CNhs10505.24-13C922.62
spleen, adult.CNhs10465.25-2G226.48
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F220.00
spleen, neonate N10.CNhs11116.752-24D127.13
spleen, neonate N20.CNhs11112.824-19H131.17
spleen, neonate N25.CNhs11099.1354-25G328.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.41
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E316.61
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D420.74
stomach, embryo E17.CNhs11006.1035-18D523.21
stomach, embryo E18.CNhs10999.1286-20C622.71
stomach, neonate N03.CNhs11193.1340-24B822.39
stomach, neonate N07.CNhs11210.718-18A920.91
stomach, neonate N25.CNhs11104.1355-25E421.99
stomach, neonate N30.CNhs11134.1386-42I128.39
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G5105.97
testis, embryo E13.CNhs11031.389-23F517.79
testis, embryo E15.CNhs11034.443-27C521.68
testis, embryo E16.CNhs11033.470-26G518.86
testis, embryo E17.CNhs11029.486-18I517.57
testis, embryo E18.CNhs11027.503-18G517.74
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I417.58
testis, neonate N10.CNhs11204.763-44D920.76
testis, neonate N20.CNhs11110.839-18H349.28
testis, neonate N30.CNhs11130.1391-42E258.18
thymus, adult.CNhs10471.38-12B523.07
thymus, embryo E14.CNhs11041.402-44I428.18
thymus, embryo E15.CNhs11005.430-45I232.56
thymus, embryo E16.CNhs11002.456-26C539.76
thymus, embryo E17.CNhs10581.478-18C133.12
thymus, embryo E18.CNhs10595.1273-19G431.79
thymus, neonate N02.CNhs11181.1541-43F835.58
thymus, neonate N03.CNhs11137.2104-43C734.26
thymus, neonate N06.CNhs11197.681-26C438.87
thymus, neonate N07.CNhs11211.713-19D333.76
thymus, neonate N10.CNhs11194.748-24E433.37
thymus, neonate N20.CNhs11186.820-7A230.89
thymus, neonate N25.CNhs11125.1362-25G730.11
thymus, neonate N30.CNhs11132.1393-42G227.35
tongue, adult.CNhs10499.32-1B426.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H325.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.35
urinary bladder, adult.CNhs10481.879-12E425.11
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E520.15
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I818.27
whole body, embryo E12.CNhs10587.857-27C924.74
whole body, embryo E13.CNhs10512.372-23H225.61
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B116.98
whole body, embryo E16.CNhs10514.453-14F215.81
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.55
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.14
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B318.25
whole body, neonate N00.CNhs10525.657-19C220.63
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D119.63
whole body, neonate N10.CNhs10518.761-6B419.94





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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