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FFCP PHASE1:Mm9::chr17:48485790..48485818,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=83433
|EntrezGene=83433
|HGNC=
|HGNC=
|MCL_coexpression_id=38
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=Q99NH8
|UniProt=Q99NH8
|association_with_transcript=0bp_to_ENSMUST00000113237,ENSMUST00000148545_5end
|association_with_transcript=0bp_to_ENSMUST00000113237,ENSMUST00000148545_5end
|cluster_id=chr17:48485790..48485818,+
|description=CAGE_peak_1_at_Trem2_5end
|description=CAGE_peak_1_at_Trem2_5end
|id=chr17:48485790..48485818,+
|id=chr17:48485790..48485818,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000557,5.43e-08,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!8.87e-10!122;UBERON:0002346!4.66e-09!71;UBERON:0003075!4.66e-09!71;UBERON:0007284!4.66e-09!71;UBERON:0001049!7.20e-09!52;UBERON:0005068!7.20e-09!52;UBERON:0006241!7.20e-09!52;UBERON:0007135!7.20e-09!52;UBERON:0000025!7.61e-09!114;UBERON:0000033!1.44e-08!63;UBERON:0000955!2.24e-08!50;UBERON:0006238!2.24e-08!50;UBERON:0002616!5.94e-08!49;UBERON:0000062!7.24e-07!269;UBERON:0004121!9.66e-07!102;UBERON:0000924!9.66e-07!102;UBERON:0006601!9.66e-07!102
|ontology_enrichment_uberon=UBERON:0004111!8.87e-10!122;UBERON:0002346!4.66e-09!71;UBERON:0003075!4.66e-09!71;UBERON:0007284!4.66e-09!71;UBERON:0001049!7.20e-09!52;UBERON:0005068!7.20e-09!52;UBERON:0006241!7.20e-09!52;UBERON:0007135!7.20e-09!52;UBERON:0000025!7.61e-09!114;UBERON:0000033!1.44e-08!63;UBERON:0000955!2.24e-08!50;UBERON:0006238!2.24e-08!50;UBERON:0002616!5.94e-08!49;UBERON:0000062!7.24e-07!269;UBERON:0004121!9.66e-07!102;UBERON:0000924!9.66e-07!102;UBERON:0006601!9.66e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-09,54;UBERON:0007023,6.06e-09,51;UBERON:0001049,8.80e-09,52;UBERON:0005068,8.80e-09,52;UBERON:0006241,8.80e-09,52;UBERON:0007135,8.80e-09,52;UBERON:0002021,1.83e-08,10;UBERON:0000411,1.83e-08,10;UBERON:0001950,1.83e-08,10;UBERON:0000955,6.57e-08,47;UBERON:0006238,6.57e-08,47;UBERON:0001017,8.20e-08,73;UBERON:0004111,1.12e-07,122;UBERON:0004175,1.69e-07,9;UBERON:0002204,1.90e-07,32;UBERON:0002616,2.30e-07,46;UBERON:0001016,2.57e-07,75;UBERON:0010314,3.17e-07,92;UBERON:0002020,8.54e-07,34
|phase1_expression=1.76163731815273,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0,1.44573593256819,0.297872853602656,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,3.76678467663217,10.9386948233332,4.71171369576418,0,0.683045484958446,0.485510353031154,0,0.709638518536602,3.48738829107195,6.25913075478431,0,0,0,0.699932108126813,0,0,0,0,1.02903774414379,6.5902691185914,9.7977697532714,0.606949382578793,0.528990979272033,0,0,0,463.44835439992,570.575891201144,483.836958278294,213.315278689104,141.392336358332,0.311068836925433,0.270011876663381,0.210324961351382,5.71301968807607,2.65042249141936,0.489963196859816,0.958454710182364,0,1.10115880999389,2.042997409363,1.84327839907492,0.527545150920775,0.823388792421687,0,4.74611098302348,1.68828783009504,1.83357897332172,0.883885756421003,2.13557521198654,0.745597783301202,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0.842666520790511,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,6.82833839698194,0.693941307064543,1.82679286987285,2.7673859670727,1.50722640552623,1.64624189989987,0.753999547978053,2.96633961281249,1.01219549843938,0,1.7794353494215,0.441683036920787,0.969750506270444,1.86391761218122,1.17112318804619,2.09446706813455,0,1.31796636956512,2.99951365496704,5.20987930999565,2.99581278809645,3.20250421973039,1.7591609295801,4.34560800480691,2.55715457330331,4.98691306942944,3.40706652442291,2.03678727700633,1.24406970610093,2.52722758433675,2.94618598241064,1.04096354370163,0.919608417733892,0.540186389416048,0.753524089178575,0.340182495756639,0.768682321709099,0.749613796477831,0.258703370739016,0.431135985865684,0,0.175951124163949,1.53437012699302,0.834141747676794,0.348252166522167,0.61734640922383,0.199034266818493,4.21327912387941,3.3455227924913,4.54661599032948,0.207125772535502,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.32833492815819,1.21603214318784,0.730999937126662,1.97595103761946,1.34206418760372,2.3131894342054,1.54356918568927,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.569003702859245,0.114248512609729,0,0.610953983535943,0.193952487167626,0.561086559122548,0.316182685621286,0,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.01430060694251,1.4470629585145,0.50925170356284,1.72617682470486,0.810676133875177,0.549122826376163,0,1.48856379067401,0.936113019343682,0.757736633841335,0,0.482443521363367,1.10851914099963,1.13694847062291,0.325929952884052,0.169745085775188,0.704070744865506,0.837531287209079,0.476087281772027,0.975668239288994,0.315270288212382,0.8858587585951,0.956728611944923,0.491589944147214,1.72684981865896,2.74833211304872,330.232911827006,112.588476550473,0,0.551873492609465,3.69266356971921,1.75817529888305,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0,0,0,3.53453448063988,2.98074178937364,2.13678724400706,0.81443479676788,4.28922319728592,1.32745138339963,0.971122544619926,0.302323556964751,0.188605079755898,0.885905678642318,1.53717573971964,1.29214146584111,3.99887102425256,1.78248689192361,0.632073515871632,0,3.09406629744561,0.680879211507576,0.900305470156551,0.776152102696527,0.857348140126369,0.709360934569094,0.891844088010353,0.987294123612726,1.522324745573,15.7230044402686,18.2175580942885,0.220528398054962,0.49465875882444,1.45317984026315,0.361877549568935,0.238744688006273,0.164140899745061,0.582961673259701,3.70850604021019,1.02522528478712,1.23832120777933,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0.276399947608848,0,0.316335993581135,0.203319467126849,0.324016022465404,0.627264888043406,0.218362563746178,0.539457385539283,1.07449492442937,0.523511883968059,0.388844919875379,1.24267862617385,0,0.897099276263873,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,0.821500670520278,0.651021924219751,0.734015410979976,0,0.864090018773596,0.632022241256357,1.21635129174099,0.513554785824136,0.25984164595559,0.537080087002444,0.39736270956253,0.480781798079875,0.295379054349154,0,0.381034033274999,0.201652370273681,0.292373642219257,0.288635524920988,0.233753804363138,0.906921534460845,0,0.0897138566094757,0,2.12508553435409,20.0820248732765,3.11357761254351,1.92931541171159,2.50786052017682,2.25900737046827,2.30162618253588,3.43737308063638,3.09335728218638,2.05524755931193,5.2877572817279,2.02506750069542,6.75481804836331,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,1.19513524027894,1.45864030240976,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.37456602987953,0.768301828858431,0.17230640686684,0,0.463537303779422,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,0.70990322463735,0.476872379894642,0.581385666529314,0.0941093804153306,0.676916863133412,1.09756783723664,0,0.679020569229309,0,0.593175090620871,0.591026894253381,0.409231043169689,0.464810523557898,1.15743966588685,0.749431733813838,0.701794825336225,0.644613162144895,0.57386499620653,0.882365676478062,0.695603506861264
|phase1_expression=1.76163731815273,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0,1.44573593256819,0.297872853602656,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,3.76678467663217,10.9386948233332,4.71171369576418,0,0.683045484958446,0.485510353031154,0,0.709638518536602,3.48738829107195,6.25913075478431,0,0,0,0.699932108126813,0,0,0,0,1.02903774414379,6.5902691185914,9.7977697532714,0.606949382578793,0.528990979272033,0,0,0,463.44835439992,570.575891201144,483.836958278294,213.315278689104,141.392336358332,0.311068836925433,0.270011876663381,0.210324961351382,5.71301968807607,2.65042249141936,0.489963196859816,0.958454710182364,0,1.10115880999389,2.042997409363,1.84327839907492,0.527545150920775,0.823388792421687,0,4.74611098302348,1.68828783009504,1.83357897332172,0.883885756421003,2.13557521198654,0.745597783301202,0.832988126665025,0.151143120213571,0,0,0,0,0,0,0.842666520790511,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,6.82833839698194,0.693941307064543,1.82679286987285,2.7673859670727,1.50722640552623,1.64624189989987,0.753999547978053,2.96633961281249,1.01219549843938,0,1.7794353494215,0.441683036920787,0.969750506270444,1.86391761218122,1.17112318804619,2.09446706813455,0,1.31796636956512,2.99951365496704,5.20987930999565,2.99581278809645,3.20250421973039,1.7591609295801,4.34560800480691,2.55715457330331,4.98691306942944,3.40706652442291,2.03678727700633,1.24406970610093,2.52722758433675,2.94618598241064,1.04096354370163,0.919608417733892,0.540186389416048,0.753524089178575,0.340182495756639,0.768682321709099,0.749613796477831,0.258703370739016,0.431135985865684,0,0.175951124163949,1.53437012699302,0.834141747676794,0.348252166522167,0.61734640922383,0.199034266818493,4.21327912387941,3.3455227924913,4.54661599032948,0.207125772535502,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.32833492815819,1.21603214318784,0.730999937126662,1.97595103761946,1.34206418760372,2.3131894342054,1.54356918568927,0.330418782983798,0,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0.569003702859245,0.114248512609729,0,0.610953983535943,0.193952487167626,0.561086559122548,0.316182685621286,0,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.01430060694251,1.4470629585145,0.50925170356284,1.72617682470486,0.810676133875177,0.549122826376163,0,1.48856379067401,0.936113019343682,0.757736633841335,0,0.482443521363367,1.10851914099963,1.13694847062291,0.325929952884052,0.169745085775188,0.704070744865506,0.837531287209079,0.476087281772027,0.975668239288994,0.315270288212382,0.8858587585951,0.956728611944923,0.491589944147214,1.72684981865896,2.74833211304872,330.232911827006,112.588476550473,0,0.551873492609465,3.69266356971921,1.75817529888305,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0,0,0,3.53453448063988,2.98074178937364,2.13678724400706,0.81443479676788,4.28922319728592,1.32745138339963,0.971122544619926,0.302323556964751,0.188605079755898,0.885905678642318,1.53717573971964,1.29214146584111,3.99887102425256,1.78248689192361,0.632073515871632,0,3.09406629744561,0.680879211507576,0.900305470156551,0.776152102696527,0.857348140126369,0.709360934569094,0.891844088010353,0.987294123612726,1.522324745573,15.7230044402686,18.2175580942885,0.220528398054962,0.49465875882444,1.45317984026315,0.361877549568935,0.238744688006273,0.164140899745061,0.582961673259701,3.70850604021019,1.02522528478712,1.23832120777933,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0.276399947608848,0,0.316335993581135,0.203319467126849,0.324016022465404,0.627264888043406,0.218362563746178,0.539457385539283,1.07449492442937,0.523511883968059,0.388844919875379,1.24267862617385,0,0.897099276263873,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,0.821500670520278,0.651021924219751,0.734015410979976,0,0.864090018773596,0.632022241256357,1.21635129174099,0.513554785824136,0.25984164595559,0.537080087002444,0.39736270956253,0.480781798079875,0.295379054349154,0,0.381034033274999,0.201652370273681,0.292373642219257,0.288635524920988,0.233753804363138,0.906921534460845,0,0.0897138566094757,0,2.12508553435409,20.0820248732765,3.11357761254351,1.92931541171159,2.50786052017682,2.25900737046827,2.30162618253588,3.43737308063638,3.09335728218638,2.05524755931193,5.2877572817279,2.02506750069542,6.75481804836331,3.17199686288943,4.65984280576638,0.103787347584177,0.399024873401031,1.19513524027894,1.45864030240976,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.37456602987953,0.768301828858431,0.17230640686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|short_description=p1@Trem2
|short_description=p1@Trem2
}}
}}

Latest revision as of 15:07, 26 September 2015

Short description:p1@Trem2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trem2_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 0bp_to_ENSMUST00000113237, ENSMUST00000148545_5end
EntrezGene:Trem2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trem2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7463.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7570.58
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2483.84
Mouse Microglia, donor1.CNhs12629.11718-123C8213.32
Mouse Microglia, donor2.CNhs12634.11736-123E8141.39
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1330.23
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1112.59
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I715.72
placenta, adult pregnant day17.CNhs10464.577-18G318.22
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F520.08
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
granulocyte monocyte progenitor cell5.43e-087

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.47e-0954
adult organism6.06e-0951
neural tube8.80e-0952
neural rod8.80e-0952
future spinal cord8.80e-0952
neural keel8.80e-0952
occipital lobe1.83e-0810
visual cortex1.83e-0810
neocortex1.83e-0810
brain6.57e-0847
future brain6.57e-0847
central nervous system8.20e-0873
anatomical conduit1.12e-07122
internal genitalia1.69e-079
musculoskeletal system1.90e-0732
regional part of brain2.30e-0746
nervous system2.57e-0775
structure with developmental contribution from neural crest3.17e-0792
gray matter8.54e-0734
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