FFCP PHASE1:Mm9::chr6:125215488..125215499,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73870 | |EntrezGene=73870 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009dug.1_5end | |association_with_transcript=0bp_to_uc009dug.1_5end | ||
|cluster_id=chr6:125215488..125215499,+ | |||
|description=CAGE_peak_5_at_4930417O13Rik_5end | |description=CAGE_peak_5_at_4930417O13Rik_5end | ||
|id=chr6:125215488..125215499,+ | |id=chr6:125215488..125215499,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.38e-23!9;CL:0000789!3.38e-23!9;CL:0002420!3.38e-23!9;CL:0002419!3.38e-23!9;CL:0000790!3.38e-23!9;CL:0000624!2.63e-20!8;CL:0000084!9.12e-19!11;CL:0000827!9.12e-19!11;CL:0000838!4.20e-17!12;CL:0000542!1.07e-15!13;CL:0000051!1.07e-15!13;CL:0000893!6.00e-14!6;CL:0002489!6.00e-14!6;CL:0000898!6.00e-14!6;CL:0000809!6.00e-14!6;CL:0000810!6.00e-14!6;CL:0000895!6.00e-14!6;CL:0000808!6.00e-14!6;CL:0000894!6.00e-14!6;CL:0000806!6.00e-14!6;CL:0000807!6.00e-14!6;CL:0000805!6.00e-14!6;CL:0002425!6.00e-14!6;CL:0002436!6.00e-14!6;CL:0002427!6.00e-14!6;CL:0002428!6.00e-14!6;CL:0002429!6.00e-14!6;CL:0002433!6.00e-14!6;CL:0002431!6.00e-14!6;CL:0002432!6.00e-14!6;CL:0000738!1.02e-11!17;CL:0002087!1.02e-11!17;CL:0002031!1.57e-09!25;CL:0000988!3.99e-07!32;CL:0002032!3.99e-07!32;CL:0000037!3.99e-07!32;CL:0000566!3.99e-07!32;CL:0000837!3.99e-07!32 | |ontology_enrichment_celltype=CL:0000791!3.38e-23!9;CL:0000789!3.38e-23!9;CL:0002420!3.38e-23!9;CL:0002419!3.38e-23!9;CL:0000790!3.38e-23!9;CL:0000624!2.63e-20!8;CL:0000084!9.12e-19!11;CL:0000827!9.12e-19!11;CL:0000838!4.20e-17!12;CL:0000542!1.07e-15!13;CL:0000051!1.07e-15!13;CL:0000893!6.00e-14!6;CL:0002489!6.00e-14!6;CL:0000898!6.00e-14!6;CL:0000809!6.00e-14!6;CL:0000810!6.00e-14!6;CL:0000895!6.00e-14!6;CL:0000808!6.00e-14!6;CL:0000894!6.00e-14!6;CL:0000806!6.00e-14!6;CL:0000807!6.00e-14!6;CL:0000805!6.00e-14!6;CL:0002425!6.00e-14!6;CL:0002436!6.00e-14!6;CL:0002427!6.00e-14!6;CL:0002428!6.00e-14!6;CL:0002429!6.00e-14!6;CL:0002433!6.00e-14!6;CL:0002431!6.00e-14!6;CL:0002432!6.00e-14!6;CL:0000738!1.02e-11!17;CL:0002087!1.02e-11!17;CL:0002031!1.57e-09!25;CL:0000988!3.99e-07!32;CL:0002032!3.99e-07!32;CL:0000037!3.99e-07!32;CL:0000566!3.99e-07!32;CL:0000837!3.99e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,6.50e-14,1;CL:0000792,6.50e-14,1;CL:0000624,2.64e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.81e-31!23;UBERON:0000974!6.81e-31!23;UBERON:0004807!6.81e-31!23;UBERON:0005058!6.81e-31!23;UBERON:0003351!6.81e-31!23;UBERON:0009113!6.81e-31!23;UBERON:0003295!6.81e-31!23;UBERON:0009722!6.81e-31!23;UBERON:0005562!6.81e-31!23;UBERON:0007690!6.81e-31!23;UBERON:0006562!1.76e-29!24;UBERON:0003408!1.76e-29!24;UBERON:0001557!1.76e-29!24;UBERON:0001042!1.76e-29!24;UBERON:0008814!1.76e-29!24;UBERON:0009145!1.76e-29!24;UBERON:0000072!7.13e-26!27;UBERON:0004177!7.00e-24!29;UBERON:0000063!2.86e-19!35;UBERON:0000065!2.99e-18!41;UBERON:0001004!9.71e-18!42;UBERON:0002193!2.43e-17!48;UBERON:0002390!2.13e-16!45;UBERON:0003061!2.13e-16!45;UBERON:0005057!2.83e-12!51;UBERON:0002368!1.68e-11!60;UBERON:0003929!3.66e-11!55;UBERON:0002405!8.20e-11!70;UBERON:0002530!2.28e-10!65;UBERON:0005911!1.54e-09!69;UBERON:0000949!4.78e-09!72;UBERON:0000490!8.41e-09!66;UBERON:0000153!3.25e-08!94;UBERON:0007811!4.17e-08!86;UBERON:0003081!6.67e-08!88 | |ontology_enrichment_uberon=UBERON:0002370!6.81e-31!23;UBERON:0000974!6.81e-31!23;UBERON:0004807!6.81e-31!23;UBERON:0005058!6.81e-31!23;UBERON:0003351!6.81e-31!23;UBERON:0009113!6.81e-31!23;UBERON:0003295!6.81e-31!23;UBERON:0009722!6.81e-31!23;UBERON:0005562!6.81e-31!23;UBERON:0007690!6.81e-31!23;UBERON:0006562!1.76e-29!24;UBERON:0003408!1.76e-29!24;UBERON:0001557!1.76e-29!24;UBERON:0001042!1.76e-29!24;UBERON:0008814!1.76e-29!24;UBERON:0009145!1.76e-29!24;UBERON:0000072!7.13e-26!27;UBERON:0004177!7.00e-24!29;UBERON:0000063!2.86e-19!35;UBERON:0000065!2.99e-18!41;UBERON:0001004!9.71e-18!42;UBERON:0002193!2.43e-17!48;UBERON:0002390!2.13e-16!45;UBERON:0003061!2.13e-16!45;UBERON:0005057!2.83e-12!51;UBERON:0002368!1.68e-11!60;UBERON:0003929!3.66e-11!55;UBERON:0002405!8.20e-11!70;UBERON:0002530!2.28e-10!65;UBERON:0005911!1.54e-09!69;UBERON:0000949!4.78e-09!72;UBERON:0000490!8.41e-09!66;UBERON:0000153!3.25e-08!94;UBERON:0007811!4.17e-08!86;UBERON:0003081!6.67e-08!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.04e-19,23;UBERON:0000974,1.04e-19,23;UBERON:0004807,1.04e-19,23;UBERON:0005058,1.04e-19,23;UBERON:0003351,1.04e-19,23;UBERON:0009113,1.04e-19,23;UBERON:0003295,1.04e-19,23;UBERON:0009722,1.04e-19,23;UBERON:0005562,1.04e-19,23;UBERON:0007690,1.04e-19,23;UBERON:0006562,6.68e-19,24;UBERON:0003408,6.68e-19,24;UBERON:0001557,6.68e-19,24;UBERON:0001042,6.68e-19,24;UBERON:0008814,6.68e-19,24;UBERON:0009145,6.68e-19,24;UBERON:0000072,7.74e-17,27;UBERON:0004177,1.07e-15,29;UBERON:0005057,1.07e-15,29;UBERON:0000077,4.73e-13,35;UBERON:0007811,1.07e-12,36;UBERON:0000065,3.56e-11,41;UBERON:0001004,6.50e-11,42;UBERON:0000153,1.15e-10,43;UBERON:0002390,3.37e-10,45;UBERON:0003061,3.37e-10,45;UBERON:0002193,1.43e-09,48;UBERON:0002405,1.43e-09,48;UBERON:0003929,2.26e-08,55;UBERON:0002368,1.10e-07,60;UBERON:0002530,4.24e-07,65;UBERON:0000490,5.42e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.140788722151667,0.468129052643987,0.34243593645101,0,1.54080656938085,0.874204024189974,0,0,0,0.315462165358238,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,1.26404448251271,0,0,0,0,0.39736270956253,0.480781798079875,1.03382669022204,0.201932899896295,0.609654453239999,1.10908803650525,0.682205165178267,1.25075394132428,1.75315353272353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.140788722151667,0.468129052643987,0.34243593645101,0,1.54080656938085,0.874204024189974,0,0,0,0.315462165358238,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,1.26404448251271,0,0,0,0,0.39736270956253,0.480781798079875,1.03382669022204,0.201932899896295,0.609654453239999,1.10908803650525,0.682205165178267,1.25075394132428,1.75315353272353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@4930417O13Rik | |short_description=p5@4930417O13Rik | ||
}} | }} |
Latest revision as of 17:02, 26 September 2015
Short description: | p5@4930417O13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_4930417O13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_uc009dug.1_5end |
EntrezGene: | 4930417O13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 6.50e-14 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.50e-14 | 1 |
CD4-positive, alpha-beta T cell | 2.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.04e-19 | 23 |
neck | 1.04e-19 | 23 |
respiratory system epithelium | 1.04e-19 | 23 |
hemolymphoid system gland | 1.04e-19 | 23 |
pharyngeal epithelium | 1.04e-19 | 23 |
thymic region | 1.04e-19 | 23 |
pharyngeal gland | 1.04e-19 | 23 |
entire pharyngeal arch endoderm | 1.04e-19 | 23 |
thymus primordium | 1.04e-19 | 23 |
early pharyngeal endoderm | 1.04e-19 | 23 |
pharynx | 6.68e-19 | 24 |
gland of gut | 6.68e-19 | 24 |
upper respiratory tract | 6.68e-19 | 24 |
chordate pharynx | 6.68e-19 | 24 |
pharyngeal arch system | 6.68e-19 | 24 |
pharyngeal region of foregut | 6.68e-19 | 24 |
segment of respiratory tract | 7.74e-17 | 27 |
hemopoietic organ | 1.07e-15 | 29 |
immune organ | 1.07e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 4.73e-13 | 35 |
craniocervical region | 1.07e-12 | 36 |
respiratory tract | 3.56e-11 | 41 |
respiratory system | 6.50e-11 | 42 |
anterior region of body | 1.15e-10 | 43 |
hematopoietic system | 3.37e-10 | 45 |
blood island | 3.37e-10 | 45 |
hemolymphoid system | 1.43e-09 | 48 |
immune system | 1.43e-09 | 48 |
gut epithelium | 2.26e-08 | 55 |
endocrine gland | 1.10e-07 | 60 |
gland | 4.24e-07 | 65 |
unilaminar epithelium | 5.42e-07 | 66 |