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FFCP PHASE1:Mm9::chr2:58998849..58998882,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227937
|EntrezGene=227937
|HGNC=
|HGNC=
|MCL_coexpression_id=3356
|TSSclassifier=NA
|UniProt=Q68FH0,Q05D18,Q3UIX3,A2AS45
|UniProt=Q68FH0,Q05D18,Q3UIX3,A2AS45
|association_with_transcript=-24bp_to_ENSMUST00000102754,ENSMUST00000168631,ENSMUST00000169005,NM_026361,NM_175464,uc008jsz.1,uc008jta.1,uc008jtb.1,uc008jtc.1,uc008jtd.1_5end
|association_with_transcript=-24bp_to_ENSMUST00000102754,ENSMUST00000168631,ENSMUST00000169005,NM_026361,NM_175464,uc008jsz.1,uc008jta.1,uc008jtb.1,uc008jtc.1,uc008jtd.1_5end
|cluster_id=chr2:58998849..58998882,+
|description=CAGE_peak_2_at_Pkp4_5end
|description=CAGE_peak_2_at_Pkp4_5end
|id=chr2:58998849..58998882,+
|id=chr2:58998849..58998882,+
|ontology_enrichment_celltype=CL:0000117!3.98e-07!23;CL:0000337!3.98e-07!23
|ontology_enrichment_celltype=CL:0000117!3.98e-07!23;CL:0000337!3.98e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-07,23;CL:0000337,3.55e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.48e-11!63;UBERON:0004111!1.29e-10!122;UBERON:0001049!1.41e-09!52;UBERON:0005068!1.41e-09!52;UBERON:0006241!1.41e-09!52;UBERON:0007135!1.41e-09!52;UBERON:0000025!1.64e-09!114;UBERON:0000955!3.78e-09!50;UBERON:0006238!3.78e-09!50;UBERON:0002616!9.99e-09!49;UBERON:0002346!2.72e-07!71;UBERON:0003075!2.72e-07!71;UBERON:0007284!2.72e-07!71;UBERON:0000468!3.31e-07!333;UBERON:0002020!9.00e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-10,54;UBERON:0004111,1.56e-10,122;UBERON:0010314,4.57e-10,92;UBERON:0001049,1.34e-09,52;UBERON:0005068,1.34e-09,52;UBERON:0006241,1.34e-09,52;UBERON:0007135,1.34e-09,52;UBERON:0000025,1.99e-09,114;UBERON:0002346,3.20e-09,64;UBERON:0003075,3.20e-09,64;UBERON:0007284,3.20e-09,64;UBERON:0010371,7.58e-09,73;UBERON:0000955,1.08e-07,47;UBERON:0006238,1.08e-07,47;UBERON:0002616,2.73e-07,46;UBERON:0002020,6.74e-07,34;UBERON:0004121,7.48e-07,95;UBERON:0000924,7.48e-07,95;UBERON:0006601,7.48e-07,95;UBERON:0003056,9.11e-07,49
|phase1_expression=3.20297694209588,13.9590163055744,6.82498859084304,7.25914107136392,12.0214975187123,4.70061961353291,2.33612640595526,0.387369970324729,1.97104211012333,1.63845168425395,0.68487187290202,0.478632953972018,0.684802919724823,0.524522414513984,0,0.404950534779652,0,0.473193248037357,0.274228867211478,0,2.12608225377674,0.0992909512008853,0.522399578277871,1.27993938234725,1.14704640533585,6.89078356938024,2.15380998079537,4.52489588640367,2.66032787238923,3.78045194639896,0.886922042621219,0.635030673459631,0.61506478758457,0,1.1554064790051,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,3.05235218932625,3.29529274101708,2.13872888981712,3.21968769738334,1.43752564364972,0,0,2.01656279485478,0,0.85960031981627,0,3.64169629547276,1.05798195854407,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,1.8664130215526,2.43010688997043,3.36519938162211,3.42781181284564,4.19650227808066,2.57230678351403,3.83381884072945,4.5960939330501,5.50579404996943,11.1087984134113,10.4452442614246,3.42904348098504,3.56801810049398,3.64639359389732,12.2840519560608,6.19038871034848,10.5430790965999,6.48182888042069,4.55589378557129,4.47358669980721,3.02904773332736,0.831287161174641,3.76823835312181,0.860423876981386,0.679971333707751,3.77792234146472,1.29955283489534,1.79210754838934,2.52799956237153,1.02258193546835,0.779358013808606,1.06001872353102,5.21120653173718,1.28326477414318,2.54805239706646,0,1.29894624606728,1.77351905832569,1.01104889002957,1.82694207550496,0.776813650941515,1.1875371125186,1.21439728736295,1.52232739156071,1.38369298353635,1.50722640552623,1.88141931417128,1.63366568728578,1.48316980640624,1.3013942122792,0,1.45590164952668,0.441683036920787,0,3.72783522436244,7.90508151931177,9.21565509979202,2.55457055208591,0.239630249011841,0.599902730993408,0.889491589511453,5.54225365797844,8.6925114535539,4.64921102817598,6.43149984711423,7.92717917724025,6.02585329222724,5.84068547043927,3.05518091550949,2.23932547098167,3.53811861807145,4.41927897361595,1.82168620147785,1.37941262660084,1.98068342785884,3.46621081022145,5.44291993210623,3.33095672740609,4.77878795254617,2.84573707812917,2.37124792226126,2.26927296201383,2.28736461413134,1.31517439456545,1.11218899690239,2.43776516565517,0.823128545631774,1.99034266818493,0,0.51469581422943,0,3.10688658803253,2.34526059981096,5.22179978236943,2.13070262026689,3.34499193970586,5.09081472528348,4.88321283975857,5.36546802799238,3.03589890154641,5.75959474697182,3.2833492815819,5.18840381093477,4.23979963533464,4.83010253640311,6.44190810049784,7.14985825118033,5.04232600658494,3.63460661282178,3.43785736662608,1.91959425481711,2.55460339046482,1.80414445850931,1.4117846723634,0.889512175379481,3.23383564391351,3.79623249235609,2.47048432086016,2.26201687920243,3.38226002469956,2.9244613067868,1.79763881730844,4.10662294761919,2.98711909881551,0.569003702859245,1.71372768914593,1.1270773567308,2.24016460629846,2.32742984601151,3.7873342740772,4.86921335856781,7.0852871030209,5.02395929092399,7.28043267138623,4.15033677922008,1.66845105716094,3.34150291692445,0.449724224769707,0.608580364165509,0.482354319504834,1.2731292589071,2.01387296215567,0.972811360650212,2.19649130550465,2.87536413054709,4.46569137202204,2.80833905803104,1.51547326768267,3.40855085691633,1.92977408545347,1.66277871149944,1.32643988239339,2.11854469374634,3.05541154395339,3.52035372432753,3.85264392116176,3.33261097240419,3.12213836572478,3.31033802623001,3.32197034473162,3.50800491046472,2.78567635016755,2.93564469172023,3.18227928879325,0,1.63171705145613,1.47529281905711,0.827810238914197,7.22477654945064,9.72856998715286,1.3114795630134,2.52470927204373,1.26203287766503,0.780877488593277,1.72338718186239,1.19484398976276,0.222798674082394,1.13230612315533,1.21443210502468,0.876767573733936,0,5.14114106274891,1.98716119291576,3.38324646967785,3.58351310577867,3.13443233647817,1.32745138339963,1.94224508923985,1.81394134178851,0.943025398779491,0.590603785761546,2.76691633149535,3.87642439752332,2.90826983582004,3.20847640546249,2.84433082142234,3.16255825724996,3.09406629744561,6.46835250932197,2.70091641046965,1.68166288917581,1.50035924522115,3.01478397191865,2.31879462882692,3.1264313914403,0.608929898229199,1.40803024838226,1.48282449604674,3.52845436887939,2.14352128823924,2.58343082713449,2.5934557719107,2.74556391207214,2.1338316966858,4.37221254944776,10.0129663085675,0.854354403989263,1.65109494370578,1.29636169158798,0.565105371014073,0,0.915112692826091,2.03974115992626,0.839708713941948,1.24379976423981,0.954670618015114,1.58167996790568,1.82987520414164,4.10420295122845,2.92723614420256,2.18362563746178,3.10187996685088,3.96736587481612,2.6175594198403,2.98114438571124,8.07741107013003,2.81846469342095,2.54178128274764,2.64733584731356,2.91676782516071,3.61647505737647,4.05494701177868,2.11243029562357,2.73429208172295,1.46803082195995,1.4495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|phase1_expression=3.20297694209588,13.9590163055744,6.82498859084304,7.25914107136392,12.0214975187123,4.70061961353291,2.33612640595526,0.387369970324729,1.97104211012333,1.63845168425395,0.68487187290202,0.478632953972018,0.684802919724823,0.524522414513984,0,0.404950534779652,0,0.473193248037357,0.274228867211478,0,2.12608225377674,0.0992909512008853,0.522399578277871,1.27993938234725,1.14704640533585,6.89078356938024,2.15380998079537,4.52489588640367,2.66032787238923,3.78045194639896,0.886922042621219,0.635030673459631,0.61506478758457,0,1.1554064790051,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,3.05235218932625,3.29529274101708,2.13872888981712,3.21968769738334,1.43752564364972,0,0,2.01656279485478,0,0.85960031981627,0,3.64169629547276,1.05798195854407,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,1.8664130215526,2.43010688997043,3.36519938162211,3.42781181284564,4.19650227808066,2.57230678351403,3.83381884072945,4.5960939330501,5.50579404996943,11.1087984134113,10.4452442614246,3.42904348098504,3.56801810049398,3.64639359389732,12.2840519560608,6.19038871034848,10.5430790965999,6.48182888042069,4.55589378557129,4.47358669980721,3.02904773332736,0.831287161174641,3.76823835312181,0.860423876981386,0.679971333707751,3.77792234146472,1.29955283489534,1.79210754838934,2.52799956237153,1.02258193546835,0.779358013808606,1.06001872353102,5.21120653173718,1.28326477414318,2.54805239706646,0,1.29894624606728,1.77351905832569,1.01104889002957,1.82694207550496,0.776813650941515,1.1875371125186,1.21439728736295,1.52232739156071,1.38369298353635,1.50722640552623,1.88141931417128,1.63366568728578,1.48316980640624,1.3013942122792,0,1.45590164952668,0.441683036920787,0,3.72783522436244,7.90508151931177,9.21565509979202,2.55457055208591,0.239630249011841,0.599902730993408,0.889491589511453,5.54225365797844,8.6925114535539,4.64921102817598,6.43149984711423,7.92717917724025,6.02585329222724,5.84068547043927,3.05518091550949,2.23932547098167,3.53811861807145,4.41927897361595,1.82168620147785,1.37941262660084,1.98068342785884,3.46621081022145,5.44291993210623,3.33095672740609,4.77878795254617,2.84573707812917,2.37124792226126,2.26927296201383,2.28736461413134,1.31517439456545,1.11218899690239,2.43776516565517,0.823128545631774,1.99034266818493,0,0.51469581422943,0,3.10688658803253,2.34526059981096,5.22179978236943,2.13070262026689,3.34499193970586,5.09081472528348,4.88321283975857,5.36546802799238,3.03589890154641,5.75959474697182,3.2833492815819,5.18840381093477,4.23979963533464,4.83010253640311,6.44190810049784,7.14985825118033,5.04232600658494,3.63460661282178,3.43785736662608,1.91959425481711,2.55460339046482,1.80414445850931,1.4117846723634,0.889512175379481,3.23383564391351,3.79623249235609,2.47048432086016,2.26201687920243,3.38226002469956,2.9244613067868,1.79763881730844,4.10662294761919,2.98711909881551,0.569003702859245,1.71372768914593,1.1270773567308,2.24016460629846,2.32742984601151,3.7873342740772,4.86921335856781,7.0852871030209,5.02395929092399,7.28043267138623,4.15033677922008,1.66845105716094,3.34150291692445,0.449724224769707,0.608580364165509,0.482354319504834,1.2731292589071,2.01387296215567,0.972811360650212,2.19649130550465,2.87536413054709,4.46569137202204,2.80833905803104,1.51547326768267,3.40855085691633,1.92977408545347,1.66277871149944,1.32643988239339,2.11854469374634,3.05541154395339,3.52035372432753,3.85264392116176,3.33261097240419,3.12213836572478,3.31033802623001,3.32197034473162,3.50800491046472,2.78567635016755,2.93564469172023,3.18227928879325,0,1.63171705145613,1.47529281905711,0.827810238914197,7.22477654945064,9.72856998715286,1.3114795630134,2.52470927204373,1.26203287766503,0.780877488593277,1.72338718186239,1.19484398976276,0.222798674082394,1.13230612315533,1.21443210502468,0.876767573733936,0,5.14114106274891,1.98716119291576,3.38324646967785,3.58351310577867,3.13443233647817,1.32745138339963,1.94224508923985,1.81394134178851,0.943025398779491,0.590603785761546,2.76691633149535,3.87642439752332,2.90826983582004,3.20847640546249,2.84433082142234,3.16255825724996,3.09406629744561,6.46835250932197,2.70091641046965,1.68166288917581,1.50035924522115,3.01478397191865,2.31879462882692,3.1264313914403,0.608929898229199,1.40803024838226,1.48282449604674,3.52845436887939,2.14352128823924,2.58343082713449,2.5934557719107,2.74556391207214,2.1338316966858,4.37221254944776,10.0129663085675,0.854354403989263,1.65109494370578,1.29636169158798,0.565105371014073,0,0.915112692826091,2.03974115992626,0.839708713941948,1.24379976423981,0.954670618015114,1.58167996790568,1.82987520414164,4.10420295122845,2.92723614420256,2.18362563746178,3.10187996685088,3.96736587481612,2.6175594198403,2.98114438571124,8.07741107013003,2.81846469342095,2.54178128274764,2.64733584731356,2.91676782516071,3.61647505737647,4.05494701177868,2.11243029562357,2.73429208172295,1.46803082195995,1.4495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|short_description=p2@Pkp4
|short_description=p2@Pkp4
}}
}}

Latest revision as of 19:22, 26 September 2015

Short description:p2@Pkp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pkp4_5end
Coexpression cluster:MCL_coexpression_mm9:3356
Association with transcript: -24bp_to_ENSMUST00000102754, ENSMUST00000168631, ENSMUST00000169005, NM_026361, NM_175464, uc008jsz.1, uc008jta.1, uc008jtb.1, uc008jtc.1, uc008jtd.1_5end
EntrezGene:Pkp4
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Pkp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.79
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.55e-0723
neuroblast (sensu Vertebrata)3.55e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.27e-1054
anatomical conduit1.56e-10122
structure with developmental contribution from neural crest4.57e-1092
neural tube1.34e-0952
neural rod1.34e-0952
future spinal cord1.34e-0952
neural keel1.34e-0952
tube1.99e-09114
neurectoderm3.20e-0964
neural plate3.20e-0964
presumptive neural plate3.20e-0964
ecto-epithelium7.58e-0973
brain1.08e-0747
future brain1.08e-0747
regional part of brain2.73e-0746
gray matter6.74e-0734
ectoderm-derived structure7.48e-0795
ectoderm7.48e-0795
presumptive ectoderm7.48e-0795
pre-chordal neural plate9.11e-0749
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