FFCP PHASE1:Mm9::chr12:85559762..85559778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238317 | |EntrezGene=238317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1271 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q2I4,Q3U224 | |UniProt=E9Q2I4,Q3U224 | ||
|association_with_transcript=52bp_to_ENSMUST00000046266,NM_001163501,uc007oem.2_5end | |association_with_transcript=52bp_to_ENSMUST00000046266,NM_001163501,uc007oem.2_5end | ||
|cluster_id=chr12:85559762..85559778,- | |||
|description=CAGE_peak_5_at_C130039O16Rik_5end | |description=CAGE_peak_5_at_C130039O16Rik_5end | ||
|id=chr12:85559762..85559778,- | |id=chr12:85559762..85559778,- | ||
|ontology_enrichment_celltype=CL:0000988!7.66e-07!32;CL:0002032!7.66e-07!32;CL:0000037!7.66e-07!32;CL:0000566!7.66e-07!32;CL:0000837!7.66e-07!32 | |ontology_enrichment_celltype=CL:0000988!7.66e-07!32;CL:0002032!7.66e-07!32;CL:0000037!7.66e-07!32;CL:0000566!7.66e-07!32;CL:0000837!7.66e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.42e-09,32;CL:0002032,8.42e-09,32;CL:0000037,8.42e-09,32;CL:0000837,8.42e-09,32;CL:0000838,2.15e-08,12;CL:0002031,5.32e-08,25;CL:0000542,1.67e-07,13;CL:0000051,1.67e-07,13;CL:0000084,2.32e-07,11;CL:0000827,2.32e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!3.95e-09!41;UBERON:0003081!4.01e-09!88;UBERON:0002390!8.24e-09!45;UBERON:0003061!8.24e-09!45;UBERON:0002193!1.79e-08!48;UBERON:0001004!2.16e-08!42;UBERON:0004177!4.65e-08!29;UBERON:0006562!3.15e-07!24;UBERON:0001557!3.15e-07!24;UBERON:0001042!3.15e-07!24;UBERON:0008814!3.15e-07!24;UBERON:0009145!3.15e-07!24;UBERON:0002370!7.13e-07!23;UBERON:0000974!7.13e-07!23;UBERON:0004807!7.13e-07!23;UBERON:0005058!7.13e-07!23;UBERON:0003351!7.13e-07!23;UBERON:0009113!7.13e-07!23;UBERON:0003295!7.13e-07!23;UBERON:0009722!7.13e-07!23;UBERON:0005562!7.13e-07!23;UBERON:0007690!7.13e-07!23;UBERON:0000926!8.63e-07!193;UBERON:0004120!8.63e-07!193;UBERON:0006603!8.63e-07!193 | |ontology_enrichment_uberon=UBERON:0000065!3.95e-09!41;UBERON:0003081!4.01e-09!88;UBERON:0002390!8.24e-09!45;UBERON:0003061!8.24e-09!45;UBERON:0002193!1.79e-08!48;UBERON:0001004!2.16e-08!42;UBERON:0004177!4.65e-08!29;UBERON:0006562!3.15e-07!24;UBERON:0001557!3.15e-07!24;UBERON:0001042!3.15e-07!24;UBERON:0008814!3.15e-07!24;UBERON:0009145!3.15e-07!24;UBERON:0002370!7.13e-07!23;UBERON:0000974!7.13e-07!23;UBERON:0004807!7.13e-07!23;UBERON:0005058!7.13e-07!23;UBERON:0003351!7.13e-07!23;UBERON:0009113!7.13e-07!23;UBERON:0003295!7.13e-07!23;UBERON:0009722!7.13e-07!23;UBERON:0005562!7.13e-07!23;UBERON:0007690!7.13e-07!23;UBERON:0000926!8.63e-07!193;UBERON:0004120!8.63e-07!193;UBERON:0006603!8.63e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,6.25e-13,41;UBERON:0001004,2.13e-12,42;UBERON:0004177,3.80e-12,29;UBERON:0005057,3.80e-12,29;UBERON:0000077,5.35e-11,35;UBERON:0002390,7.26e-11,45;UBERON:0003061,7.26e-11,45;UBERON:0002193,9.34e-11,48;UBERON:0002405,9.34e-11,48;UBERON:0006562,1.08e-10,24;UBERON:0001557,1.08e-10,24;UBERON:0001042,1.08e-10,24;UBERON:0008814,1.08e-10,24;UBERON:0009145,1.08e-10,24;UBERON:0002370,4.06e-10,23;UBERON:0000974,4.06e-10,23;UBERON:0004807,4.06e-10,23;UBERON:0005058,4.06e-10,23;UBERON:0003351,4.06e-10,23;UBERON:0009113,4.06e-10,23;UBERON:0003295,4.06e-10,23;UBERON:0009722,4.06e-10,23;UBERON:0005562,4.06e-10,23;UBERON:0007690,4.06e-10,23;UBERON:0003408,1.85e-09,24;UBERON:0003081,6.23e-09,87;UBERON:0000072,7.65e-09,27;UBERON:0000153,1.74e-08,43;UBERON:0001041,9.34e-08,80 | |||
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| ||
|short_description=p5@C130039O16Rik | |short_description=p5@C130039O16Rik | ||
}} | }} |
Latest revision as of 22:12, 26 September 2015
Short description: | p5@C130039O16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_C130039O16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1271 |
Association with transcript: | 52bp_to_ENSMUST00000046266, NM_001163501, uc007oem.2_5end |
EntrezGene: | C130039O16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.42e-09 | 32 |
hematopoietic stem cell | 8.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.42e-09 | 32 |
lymphoid lineage restricted progenitor cell | 2.15e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 5.32e-08 | 25 |
lymphocyte | 1.67e-07 | 13 |
common lymphoid progenitor | 1.67e-07 | 13 |
T cell | 2.32e-07 | 11 |
pro-T cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 6.25e-13 | 41 |
respiratory system | 2.13e-12 | 42 |
hemopoietic organ | 3.80e-12 | 29 |
immune organ | 3.80e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 5.35e-11 | 35 |
hematopoietic system | 7.26e-11 | 45 |
blood island | 7.26e-11 | 45 |
hemolymphoid system | 9.34e-11 | 48 |
immune system | 9.34e-11 | 48 |
pharynx | 1.08e-10 | 24 |
upper respiratory tract | 1.08e-10 | 24 |
chordate pharynx | 1.08e-10 | 24 |
pharyngeal arch system | 1.08e-10 | 24 |
pharyngeal region of foregut | 1.08e-10 | 24 |
thymus | 4.06e-10 | 23 |
neck | 4.06e-10 | 23 |
respiratory system epithelium | 4.06e-10 | 23 |
hemolymphoid system gland | 4.06e-10 | 23 |
pharyngeal epithelium | 4.06e-10 | 23 |
thymic region | 4.06e-10 | 23 |
pharyngeal gland | 4.06e-10 | 23 |
entire pharyngeal arch endoderm | 4.06e-10 | 23 |
thymus primordium | 4.06e-10 | 23 |
early pharyngeal endoderm | 4.06e-10 | 23 |
gland of gut | 1.85e-09 | 24 |
lateral plate mesoderm | 6.23e-09 | 87 |
segment of respiratory tract | 7.65e-09 | 27 |
anterior region of body | 1.74e-08 | 43 |
foregut | 9.34e-08 | 80 |