FFCP PHASE1:Mm9::chr2:78709166..78709266,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:78709166..78709266,+ to FFCP PHASE1:Mm9::chr2:78709166..78709266,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22193 | |EntrezGene=22193 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P52483,B1AWL1,D3YW10 | |UniProt=P52483,B1AWL1,D3YW10 | ||
|association_with_transcript=0bp_to_ENSMUST00000028398,NM_009454,uc008kgm.1,uc008kgn.1_5end | |||
|cluster_id=chr2:78709166..78709266,+ | |||
|description=CAGE_peak_1_at_Ube2e3_5end | |||
|id=chr2:78709166..78709266,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.65e-14!33;CL:0000047!3.65e-14!33;CL:0000031!3.65e-14!33;CL:0000404!3.65e-14!33;CL:0000221!6.00e-14!44;CL:0000133!6.00e-14!44;CL:0002319!1.40e-13!43;CL:0000117!2.68e-11!23;CL:0000337!2.68e-11!23;CL:0000055!4.48e-10!50;CL:0002321!4.79e-10!70;CL:0000220!4.79e-10!70;CL:0000393!5.03e-10!39;CL:0000211!5.03e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.65e-14,33;CL:0000047,3.65e-14,33;CL:0000031,3.65e-14,33;CL:0000404,3.65e-14,33;CL:0000221,6.00e-14,44;CL:0000133,6.00e-14,44;CL:0002319,1.40e-13,43;CL:0000117,2.68e-11,23;CL:0000337,2.68e-11,23;CL:0002321,4.79e-10,70;CL:0000393,5.03e-10,39;CL:0000211,5.03e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.99e-13!73;UBERON:0005743!5.99e-13!73;UBERON:0000073!4.01e-12!75;UBERON:0001016!4.01e-12!75;UBERON:0002020!1.27e-08!34;UBERON:0000025!4.30e-08!114;UBERON:0004121!1.27e-07!102;UBERON:0000924!1.27e-07!102;UBERON:0006601!1.27e-07!102;UBERON:0000033!4.47e-07!63;UBERON:0001049!8.20e-07!52;UBERON:0005068!8.20e-07!52;UBERON:0006241!8.20e-07!52;UBERON:0007135!8.20e-07!52;UBERON:0000955!9.08e-07!50;UBERON:0006238!9.08e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.99e-13,73;UBERON:0001016,4.01e-12,75;UBERON:0004121,6.47e-10,95;UBERON:0000924,6.47e-10,95;UBERON:0006601,6.47e-10,95;UBERON:0002020,1.27e-08,34;UBERON:0002346,2.16e-08,64;UBERON:0003075,2.16e-08,64;UBERON:0007284,2.16e-08,64;UBERON:0000073,3.41e-08,54;UBERON:0011216,3.67e-08,194;UBERON:0000025,4.30e-08,114;UBERON:0010371,2.93e-07,73;UBERON:0001049,8.20e-07,52;UBERON:0005068,8.20e-07,52;UBERON:0006241,8.20e-07,52;UBERON:0007135,8.20e-07,52 | |||
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| |phase1_expression=41.4785514001416,25.8241801653127,29.1199513209303,42.0425253716494,40.0716583957078,18.8024784541317,17.7545606852599,7.74739940649458,38.2945324252534,36.280001579909,15.2383991720699,10.0512920334124,7.53283211697305,6.55653018142481,44.3035983214831,54.4658469278632,83.9474253753776,13.0916798623669,10.9691546884591,16.1268067683251,22.1112554392781,17.276625508954,22.9855814442263,12.3194165550923,13.3057383018959,25.8404383851759,25.8457197695445,22.8399506647042,36.6745199550802,36.29233868543,22.3947815761858,26.0362576118449,19.6820732027062,15.8481681015439,33.7956395108991,35.4079794613589,28.5837098767317,13.811543814318,24.2213956802378,24.0820922227947,14.7057872007754,23.9065919735456,21.8479658864019,14.2263404312402,17.335455238537,13.0318194034794,59.461742170451,32.9217986134474,32.0741826792329,35.9695313287424,34.1566868765885,27.3129872293446,11.7447824240415,12.3311564141929,8.73843877770406,28.8130568360261,27.7937436740594,26.814948798427,62.5157864056157,60.3049716370117,58.3124891225685,32.1902305465675,32.9039074561122,26.0970918011606,28.6771245144423,19.1829631035447,30.8588113833957,33.0427742576537,41.683224148008,33.7514845829227,38.0688180046001,35.7063730504754,38.2102575846291,52.5485528632153,44.9515259075529,56.0723459832113,57.2602581196821,40.2215114968341,40.8593378461608,89.0232442178808,81.8814410241566,71.3651317662761,41.8774498502071,32.0774687718058,31.7820355375765,54.8009168981022,45.2741944941147,60.766219339048,15.4481434399695,28.4904781602581,28.1168554040627,29.2544118173671,33.3185953516798,32.9218946899068,26.6408331153544,32.2579358710082,24.9991067834518,29.654876128582,27.0177444786984,31.4472221314203,39.8586877968006,56.4636500622998,112.114305470924,177.766675788333,22.0820861831438,25.589346412985,21.2320266906209,30.7154636444271,10.8753911131812,19.0005938002976,28.7985642431786,22.5304453950985,23.2921652228619,19.7446659123936,20.9307898701555,23.24831939599,24.7194967734374,22.5574996795062,34.4998115260451,29.4415666904285,31.8011786582967,27.1530141755724,13.0474232852686,48.6016123039168,77.2858348141649,22.7356779135646,31.511377745057,28.7953310876836,22.7455706460786,23.666921025962,30.652540388848,52.3978648310645,27.4642425903797,26.8501230196847,30.5448425502553,29.5279098783319,28.1076644226873,28.3647892991012,14.9106427475868,25.0425808504904,34.8722787140046,40.9225745891582,35.2921774418485,30.5930780206502,26.9424536639258,29.4661556655155,36.1688656800553,33.8901415668111,47.6405264381581,37.4430038732282,37.4775894469211,28.4954452155847,27.5266776733342,21.5916343243743,25.516984914585,44.9817443009795,19.6619692447706,15.6982223339976,15.9131559661532,27.7548535197573,26.2669187178828,33.4915434317488,31.9605393040034,32.2693340065742,34.7101003996601,28.6016752043002,35.4120889847497,26.856028744449,36.5322866807927,26.7592966448925,29.4279778651456,28.2165975730891,22.8332119902693,25.3650131457103,29.4405927989778,32.0033344499575,16.5209391491899,24.8583532663732,34.3394083361727,29.2618206544153,25.9023597257408,20.1683524623343,24.2392067790909,24.5391057685201,28.9462727542152,25.3636390274977,23.6255096272253,28.2518190298434,27.4899362837959,20.6728463990471,23.9913235360911,24.0960940637784,28.6398530439153,29.0191222028711,24.7957018480777,27.4929292591174,25.407775818959,28.0543279561274,27.8873128717975,25.5365556004712,29.0447646506543,30.1089079969193,32.3133363524992,41.3775862175913,54.250282651244,53.74204485998,69.783881757645,58.6060498198373,58.0546942061637,33.6604480817448,36.804696477933,29.3780712111247,126.516021744072,32.7484033948283,29.0195035996541,29.5517287198121,25.4744327201115,32.806159452709,26.2349530036579,40.7406535306542,34.0596800763834,34.4582524123632,30.0403517809283,29.4811013097596,25.7087132156895,27.7089779958074,27.5861502185834,38.0919266195893,33.4855014180723,29.3315333341171,30.5652417902635,29.2191098334653,34.6819953060326,39.1612092349471,15.7364567366092,19.8674457339407,28.578005017827,23.3251256318484,27.3771358779048,24.2372090116198,40.7005603046971,39.4343131739605,35.9757074213774,38.7129452683134,33.8653984605239,49.8214694188345,36.4329631507405,35.0707029493574,33.204173347508,43.378377716944,27.5363765304041,35.613120733451,31.9258440333009,26.0652794296606,34.5137359683903,25.0064055239631,21.7672961014621,20.9351638529047,16.832207894204,25.2096821314021,19.898978573953,31.9909681940205,29.9457797843166,26.2310509086727,20.0295356292498,27.8465966770104,17.0219802876894,32.0508747375732,31.5635188429921,29.1498367642966,26.4236948126988,24.6148968290857,28.1378825229627,19.790221692449,24.4058576386259,33.6812992673474,20.9501978152214,34.2963406118279,33.5846007527484,22.074530523705,25.7844263046775,21.338316966858,30.8969686827642,25.2178410734293,45.9642669346224,42.5156948004238,38.3352671655303,52.1780625902994,45.1090951479383,46.6707473341306,41.3047584885068,36.1074746995038,39.3869925342608,26.7307773044232,31.9499353516947,2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| ||
|short_description=p1@Ube2e3 | |||
}} | }} |
Latest revision as of 00:38, 27 September 2015
Short description: | p1@Ube2e3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ube2e3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028398, NM_009454, uc008kgm.1, uc008kgn.1_5end |
EntrezGene: | Ube2e3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.65e-14 | 33 |
neuronal stem cell | 3.65e-14 | 33 |
neuroblast | 3.65e-14 | 33 |
electrically signaling cell | 3.65e-14 | 33 |
ectodermal cell | 6.00e-14 | 44 |
neurectodermal cell | 6.00e-14 | 44 |
neural cell | 1.40e-13 | 43 |
CNS neuron (sensu Vertebrata) | 2.68e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.68e-11 | 23 |
embryonic cell | 4.79e-10 | 70 |
electrically responsive cell | 5.03e-10 | 39 |
electrically active cell | 5.03e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.99e-13 | 73 |
nervous system | 4.01e-12 | 75 |
ectoderm-derived structure | 6.47e-10 | 95 |
ectoderm | 6.47e-10 | 95 |
presumptive ectoderm | 6.47e-10 | 95 |
gray matter | 1.27e-08 | 34 |
neurectoderm | 2.16e-08 | 64 |
neural plate | 2.16e-08 | 64 |
presumptive neural plate | 2.16e-08 | 64 |
regional part of nervous system | 3.41e-08 | 54 |
organ system subdivision | 3.67e-08 | 194 |
tube | 4.30e-08 | 114 |
ecto-epithelium | 2.93e-07 | 73 |
neural tube | 8.20e-07 | 52 |
neural rod | 8.20e-07 | 52 |
future spinal cord | 8.20e-07 | 52 |
neural keel | 8.20e-07 | 52 |