FFCP PHASE1:Mm9::chr6:29479308..29479325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27056 | |EntrezGene=27056 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=P56477 | |UniProt=P56477 | ||
|association_with_transcript=26bp_to_ENSMUST00000163511,NM_001252382,uc009bdw.1_5end | |association_with_transcript=26bp_to_ENSMUST00000163511,NM_001252382,uc009bdw.1_5end | ||
|cluster_id=chr6:29479308..29479325,+ | |||
|description=CAGE_peak_3_at_Irf5_5end | |description=CAGE_peak_3_at_Irf5_5end | ||
|id=chr6:29479308..29479325,+ | |id=chr6:29479308..29479325,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.88e-18,19;CL:0000988,7.92e-16,32;CL:0002032,7.92e-16,32;CL:0000037,7.92e-16,32;CL:0000837,7.92e-16,32;CL:0002320,3.42e-15,46;CL:0000134,3.42e-15,46;CL:0000763,1.47e-12,16;CL:0000219,2.61e-12,54;CL:0000557,8.60e-10,7;CL:0002092,4.82e-09,3;CL:0002540,4.82e-09,3;CL:0000034,1.72e-08,97;CL:0000553,1.36e-07,6;CL:0000556,1.36e-07,6;CL:0002031,2.48e-07,25;CL:0000839,3.84e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.36e-10!70;UBERON:0001474!5.78e-09!22;UBERON:0004765!5.78e-09!22;UBERON:0001434!5.78e-09!22;UBERON:0002204!6.31e-09!32;UBERON:0002371!8.36e-09!16;UBERON:0002193!9.85e-09!48;UBERON:0002390!1.13e-07!45;UBERON:0003061!1.13e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.90e-23,16;UBERON:0001474,9.57e-19,22;UBERON:0004765,9.57e-19,22;UBERON:0001434,9.57e-19,22;UBERON:0002193,3.94e-17,48;UBERON:0002405,3.94e-17,48;UBERON:0002204,4.30e-16,32;UBERON:0002384,3.42e-15,46;UBERON:0002390,6.12e-15,45;UBERON:0003061,6.12e-15,45;UBERON:0002106,1.32e-13,6;UBERON:0004457,1.32e-13,6;UBERON:0000042,1.32e-13,6;UBERON:0004854,1.32e-13,6;UBERON:0009034,1.32e-13,6;UBERON:0002095,1.32e-13,6;UBERON:0004782,1.32e-13,6;UBERON:0003281,1.32e-13,6;UBERON:0009664,1.32e-13,6;UBERON:0002296,1.32e-13,6;UBERON:0005602,1.32e-13,6;UBERON:0001179,1.32e-13,6;UBERON:0006293,1.32e-13,6;UBERON:0003887,6.28e-08,10;UBERON:0003081,1.41e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,2.42970320867791,0,5.52058789376916,8.08975158273859,3.81950686618227,0,1.88652807281682,4.17919662622297,1.27993938234725,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,4.69791296961662,0,0,0.257259436035947,0,0,0,0,0,0,0,4.04954872776629,9.88866362566974,3.5524005747305,0.599200221036809,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.742210695324124,0,0,0.461230994512117,0.60289056221049,0.117588707135705,0,0,0.289198713839823,4.42305275974937,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0.510914110417183,1.91704199209472,2.99951365496704,2.54140454146129,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.486723789203273,0.101839363850316,0.746441823660558,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,5.61770549850588,5.40430604940902,2.27330799516474,0.828503090142008,0,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0,0,0.292399974850665,0.658650345873152,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.667380422864376,0,0.899448449539415,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0.433947175744535,6.03165135757089,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0.556275906031529,1.36696704638282,1.03193433981611,1.29636169158798,1.50694765603753,2.1871076435364,2.28778173206523,1.86976272993241,3.07893195112048,1.52019971184866,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.608175645870493,0.102710957164827,0,0.358053391334963,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.487289403698762,0.481059208201647,0.467507608726276,0.680191150845634,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.789209134313529,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,2.42970320867791,0,5.52058789376916,8.08975158273859,3.81950686618227,0,1.88652807281682,4.17919662622297,1.27993938234725,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,4.69791296961662,0,0,0.257259436035947,0,0,0,0,0,0,0,4.04954872776629,9.88866362566974,3.5524005747305,0.599200221036809,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.742210695324124,0,0,0.461230994512117,0.60289056221049,0.117588707135705,0,0,0.289198713839823,4.42305275974937,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0.510914110417183,1.91704199209472,2.99951365496704,2.54140454146129,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.486723789203273,0.101839363850316,0.746441823660558,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,5.61770549850588,5.40430604940902,2.27330799516474,0.828503090142008,0,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0,0,0.292399974850665,0.658650345873152,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.667380422864376,0,0.899448449539415,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0.433947175744535,6.03165135757089,3.80733978673097,0.491764273019036,0.275936746304732,0,0,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0.556275906031529,1.36696704638282,1.03193433981611,1.29636169158798,1.50694765603753,2.1871076435364,2.28778173206523,1.86976272993241,3.07893195112048,1.52019971184866,0.954670618015114,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0.608175645870493,0.102710957164827,0,0.358053391334963,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.487289403698762,0.481059208201647,0.467507608726276,0.680191150845634,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.789209134313529,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Irf5 | |short_description=p3@Irf5 | ||
}} | }} |
Latest revision as of 00:58, 27 September 2015
Short description: | p3@Irf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Irf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 26bp_to_ENSMUST00000163511, NM_001252382, uc009bdw.1_5end |
EntrezGene: | Irf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.88e-18 | 19 |
hematopoietic cell | 7.92e-16 | 32 |
hematopoietic oligopotent progenitor cell | 7.92e-16 | 32 |
hematopoietic stem cell | 7.92e-16 | 32 |
hematopoietic multipotent progenitor cell | 7.92e-16 | 32 |
connective tissue cell | 3.42e-15 | 46 |
mesenchymal cell | 3.42e-15 | 46 |
myeloid cell | 1.47e-12 | 16 |
motile cell | 2.61e-12 | 54 |
granulocyte monocyte progenitor cell | 8.60e-10 | 7 |
bone marrow cell | 4.82e-09 | 3 |
mesenchymal stem cell of the bone marrow | 4.82e-09 | 3 |
stem cell | 1.72e-08 | 97 |
megakaryocyte progenitor cell | 1.36e-07 | 6 |
megakaryocyte | 1.36e-07 | 6 |
hematopoietic lineage restricted progenitor cell | 2.48e-07 | 25 |
myeloid lineage restricted progenitor cell | 3.84e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.90e-23 | 16 |
bone element | 9.57e-19 | 22 |
skeletal element | 9.57e-19 | 22 |
skeletal system | 9.57e-19 | 22 |
hemolymphoid system | 3.94e-17 | 48 |
immune system | 3.94e-17 | 48 |
musculoskeletal system | 4.30e-16 | 32 |
connective tissue | 3.42e-15 | 46 |
hematopoietic system | 6.12e-15 | 45 |
blood island | 6.12e-15 | 45 |
spleen | 1.32e-13 | 6 |
cavity lining | 1.32e-13 | 6 |
serous membrane | 1.32e-13 | 6 |
gastrointestinal system mesentery | 1.32e-13 | 6 |
stomach region | 1.32e-13 | 6 |
mesentery | 1.32e-13 | 6 |
gastrointestinal system serosa | 1.32e-13 | 6 |
mesentery of stomach | 1.32e-13 | 6 |
gut mesentery | 1.32e-13 | 6 |
dorsal mesentery | 1.32e-13 | 6 |
dorsal mesogastrium | 1.32e-13 | 6 |
peritoneal cavity | 1.32e-13 | 6 |
spleen primordium | 1.32e-13 | 6 |
intraembryonic coelom | 6.28e-08 | 10 |
lateral plate mesoderm | 1.41e-07 | 87 |