FFCP PHASE1:Mm9::chr15:76984103..76984104,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93686 | |EntrezGene=93686 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BP71 | |UniProt=Q8BP71 | ||
|association_with_transcript=137bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end | |association_with_transcript=137bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end | ||
|cluster_id=chr15:76984103..76984104,- | |||
|description=CAGE_peak_18_at_Rbfox2_5end | |description=CAGE_peak_18_at_Rbfox2_5end | ||
|id=chr15:76984103..76984104,- | |id=chr15:76984103..76984104,- | ||
|ontology_enrichment_celltype=CL:0000393!9.56e-10!39;CL:0000211!9.56e-10!39;CL:0000055!6.49e-09!50;CL:0000540!4.37e-08!33;CL:0000047!4.37e-08!33;CL:0000031!4.37e-08!33;CL:0000404!4.37e-08!33;CL:0002319!1.18e-07!43;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0000117!4.33e-07!23;CL:0000337!4.33e-07!23;CL:0002609!4.74e-07!6 | |ontology_enrichment_celltype=CL:0000393!9.56e-10!39;CL:0000211!9.56e-10!39;CL:0000055!6.49e-09!50;CL:0000540!4.37e-08!33;CL:0000047!4.37e-08!33;CL:0000031!4.37e-08!33;CL:0000404!4.37e-08!33;CL:0002319!1.18e-07!43;CL:0000221!2.56e-07!44;CL:0000133!2.56e-07!44;CL:0000117!4.33e-07!23;CL:0000337!4.33e-07!23;CL:0002609!4.74e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.66e-39,3;CL:0000737,2.66e-39,3;CL:0000746,2.66e-39,3;CL:0000513,2.66e-39,3;CL:0000680,2.48e-20,6;CL:0000187,2.48e-20,6;CL:0000056,2.48e-20,6;CL:0000222,1.31e-17,7;CL:0000355,5.71e-14,9;CL:0002608,5.71e-11,3;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.71e-14,9;UBERON:0002036,5.71e-14,9;UBERON:0002385,5.71e-14,9;UBERON:0000486,5.71e-14,9;UBERON:0007503,5.71e-14,9;UBERON:0001015,5.71e-14,9;UBERON:0002329,5.71e-14,9;UBERON:0003082,5.71e-14,9;UBERON:0003059,5.71e-14,9;UBERON:0007282,5.71e-14,9;UBERON:0004290,5.71e-14,9;UBERON:0009618,5.71e-14,9;UBERON:0000383,1.08e-12,10;UBERON:0007524,1.21e-11,11;UBERON:0003077,1.21e-11,11;UBERON:0007285,1.21e-11,11;UBERON:0007100,1.52e-07,18;UBERON:0000948,1.52e-07,18;UBERON:0005498,1.52e-07,18;UBERON:0004140,1.52e-07,18;UBERON:0009881,1.52e-07,18;UBERON:0004141,1.52e-07,18;UBERON:0003084,1.52e-07,18;UBERON:0007005,1.52e-07,18;UBERON:0004139,1.52e-07,18;UBERON:0004291,1.52e-07,18 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,1.54355661621568,0,1.03134418455488,0.404632921719196,0,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.518448061542388,0.270011876663381,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,1.15014565221884,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.365950574409639,0,0,0,0,0.294628585473668,0,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0.900310307305074,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0.234423373184406,0.327869890753351,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0,0,0,0,0,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,1.54355661621568,0,1.03134418455488,0.404632921719196,0,0.633831403506179,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.518448061542388,0.270011876663381,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,1.15014565221884,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.365950574409639,0,0,0,0,0.294628585473668,0,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0.900310307305074,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0.234423373184406,0.327869890753351,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0,0,0,0,0,0,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p18@Rbfox2 | |short_description=p18@Rbfox2 | ||
}} | }} |
Latest revision as of 01:20, 27 September 2015
Short description: | p18@Rbfox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Rbfox2_5end |
Coexpression cluster: | NA |
Association with transcript: | 137bp_to_ENSMUST00000111581, ENSMUST00000166610, NM_001110828, NM_001110829, NM_001110830, uc007wnc.2, uc007wnd.2, uc007wne.2, uc007wnf.2, uc011zvf.1, uc011zvg.1_5end |
EntrezGene: | Rbfox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.66e-39 | 3 |
striated muscle cell | 2.66e-39 | 3 |
cardiac muscle cell | 2.66e-39 | 3 |
cardiac muscle myoblast | 2.66e-39 | 3 |
muscle precursor cell | 2.48e-20 | 6 |
muscle cell | 2.48e-20 | 6 |
myoblast | 2.48e-20 | 6 |
mesodermal cell | 1.31e-17 | 7 |
multi-potent skeletal muscle stem cell | 5.71e-14 | 9 |
hippocampal neuron | 5.71e-11 | 3 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.71e-14 | 9 |
striated muscle tissue | 5.71e-14 | 9 |
muscle tissue | 5.71e-14 | 9 |
multilaminar epithelium | 5.71e-14 | 9 |
epithelial vesicle | 5.71e-14 | 9 |
musculature | 5.71e-14 | 9 |
somite | 5.71e-14 | 9 |
myotome | 5.71e-14 | 9 |
presomitic mesoderm | 5.71e-14 | 9 |
presumptive segmental plate | 5.71e-14 | 9 |
dermomyotome | 5.71e-14 | 9 |
trunk paraxial mesoderm | 5.71e-14 | 9 |
musculature of body | 1.08e-12 | 10 |
dense mesenchyme tissue | 1.21e-11 | 11 |
paraxial mesoderm | 1.21e-11 | 11 |
presumptive paraxial mesoderm | 1.21e-11 | 11 |
primary circulatory organ | 1.52e-07 | 18 |
heart | 1.52e-07 | 18 |
primitive heart tube | 1.52e-07 | 18 |
primary heart field | 1.52e-07 | 18 |
anterior lateral plate mesoderm | 1.52e-07 | 18 |
heart tube | 1.52e-07 | 18 |
heart primordium | 1.52e-07 | 18 |
cardiac mesoderm | 1.52e-07 | 18 |
cardiogenic plate | 1.52e-07 | 18 |
heart rudiment | 1.52e-07 | 18 |