FFCP PHASE1:Mm9::chr2:90936886..90936898,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:90936886..90936898,+
|short_description=p5@Sfpi1
|description=CAGE_peak_5_at_Sfpi1_5end
|association_with_transcript=-38bp_to_ENSMUST00000132741_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20375 | |EntrezGene=20375 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=E9QAI9 | |UniProt=E9QAI9 | ||
|association_with_transcript=-38bp_to_ENSMUST00000132741_5end | |||
|cluster_id=chr2:90936886..90936898,+ | |||
|description=CAGE_peak_5_at_Sfpi1_5end | |||
|id=chr2:90936886..90936898,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.35e-17,19;CL:0000763,7.26e-13,16;CL:0000988,1.29e-12,32;CL:0002032,1.29e-12,32;CL:0000037,1.29e-12,32;CL:0000837,1.29e-12,32;CL:0000557,2.08e-11,7;CL:0002320,4.38e-11,46;CL:0000134,4.38e-11,46;CL:0000219,1.52e-09,54;CL:0000839,3.60e-09,13;CL:0002194,2.02e-07,4;CL:0000766,2.02e-07,4;CL:0000234,2.02e-07,4;CL:0000576,2.02e-07,4;CL:0000235,2.02e-07,4;CL:0000864,2.02e-07,4;CL:0002009,2.02e-07,4;CL:0000040,2.02e-07,4;CL:0000559,2.02e-07,4;CL:0000034,2.74e-07,97;CL:0002031,3.97e-07,25;CL:0000553,7.48e-07,6;CL:0000556,7.48e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.57e-12!70;UBERON:0001474!3.22e-10!22;UBERON:0004765!3.22e-10!22;UBERON:0001434!3.22e-10!22;UBERON:0002371!8.62e-10!16;UBERON:0002193!6.55e-09!48;UBERON:0002204!8.59e-09!32;UBERON:0002390!1.20e-07!45;UBERON:0003061!1.20e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-21,16;UBERON:0001474,4.76e-21,22;UBERON:0004765,4.76e-21,22;UBERON:0001434,4.76e-21,22;UBERON:0002204,1.09e-20,32;UBERON:0002193,1.26e-13,48;UBERON:0002405,1.26e-13,48;UBERON:0002390,3.71e-12,45;UBERON:0003061,3.71e-12,45;UBERON:0002384,4.38e-11,46;UBERON:0002106,1.57e-08,6;UBERON:0004457,1.57e-08,6;UBERON:0000042,1.57e-08,6;UBERON:0004854,1.57e-08,6;UBERON:0009034,1.57e-08,6;UBERON:0002095,1.57e-08,6;UBERON:0004782,1.57e-08,6;UBERON:0003281,1.57e-08,6;UBERON:0009664,1.57e-08,6;UBERON:0002296,1.57e-08,6;UBERON:0005602,1.57e-08,6;UBERON:0001179,1.57e-08,6;UBERON:0006293,1.57e-08,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,2.63217847606774,0,13.249410945046,9.73512478600745,12.3072999021429,0.17008658030214,4.96454756004426,2.08959831311148,1.75991665072747,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,25.9489611056883,28.1280724028568,19.8939022710043,28.2351114254887,19.8083190637949,31.558172947025,0,0,0,1.56478268869608,0.218025156380447,0,0.194429899074283,0,0,13.5903910906766,0,0,0,0,1.54701627683233,0,0,0,0,0,18.4479442042687,34.6103226898441,24.8668040231135,6.2916023208865,4.61061966385865,0.207379224616955,0.135005938331691,0,0,0,0,0.0958454710182364,0,3.30347642998166,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.569486723196412,0,0.075726193333184,0,0,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,12.6879562987114,0.445326417194474,0.346970653532272,0,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0.289198713839823,3.5384422077995,0.808834249737046,2.42925670306433,2.42437626567611,0,0,0.209446706813455,1.02182822083437,4.43315960671905,4.19931911695385,5.97230067243404,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,2.86136032403214,0,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.61734640922383,0.199034266818493,5.61770549850588,3.08817488537658,5.11494298912067,0,0,0.180062061461015,0,0,0,0,0,0,0.329119699826961,0,0.243206428637567,0.438599962275997,0.439100230582101,0.536825675041487,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.470996183524124,0.246794327843601,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.811440485554012,2.41177159752417,1.01850340712568,0.863088412352432,2.2698931748505,1.09824565275233,2.87536413054709,1.86070473834252,0.936113019343682,0.505157755894224,1.07638448113147,0.482443521363367,1.47802552133284,0.189491411770485,0.325929952884052,0.509235257325564,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.797273843287435,1.47476983244164,0.690739927463582,1.01254341007058,12.0633027151418,13.5976420954677,0.983528546038072,0.551873492609465,0.481651769963376,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,0,0,0,0,0.590603785761546,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0.532020700926821,0.535106452806212,0.493647061806363,0,0,0,0,0.8244312647074,0.645857706783622,0.301564624640779,0,0.328281799490123,1.1659233465194,0.18542530201051,5.98048082792484,1.857481811669,1.11116716421827,2.26042148405629,3.55404992074665,3.66045077130436,4.75939603982795,5.318155188299,4.14599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0.258319646955462,0,0,0.39061315453185,0.104859344425711,0,0,0.316011120628178,1.41907650703115,0.513554785824136,0.51968329191118,0.716106782669926,0.596044064343795,0.721172697119813,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.481059208201647,0.701261413089414,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.972426868273176,0.419226325255965,0.551530525350042,0,0,0,0,0.50695859978048,0,0.280924522409647,0.384150914429216,0.459483751644906,0,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421 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| ||
|short_description=p5@Sfpi1 | |||
}} | }} |
Latest revision as of 02:40, 27 September 2015
Short description: | p5@Sfpi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sfpi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -38bp_to_ENSMUST00000132741_5end |
EntrezGene: | Sfpi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.35e-17 | 19 |
myeloid cell | 7.26e-13 | 16 |
hematopoietic cell | 1.29e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.29e-12 | 32 |
hematopoietic stem cell | 1.29e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.29e-12 | 32 |
granulocyte monocyte progenitor cell | 2.08e-11 | 7 |
connective tissue cell | 4.38e-11 | 46 |
mesenchymal cell | 4.38e-11 | 46 |
motile cell | 1.52e-09 | 54 |
myeloid lineage restricted progenitor cell | 3.60e-09 | 13 |
monopoietic cell | 2.02e-07 | 4 |
myeloid leukocyte | 2.02e-07 | 4 |
phagocyte | 2.02e-07 | 4 |
monocyte | 2.02e-07 | 4 |
macrophage | 2.02e-07 | 4 |
tissue-resident macrophage | 2.02e-07 | 4 |
macrophage dendritic cell progenitor | 2.02e-07 | 4 |
monoblast | 2.02e-07 | 4 |
promonocyte | 2.02e-07 | 4 |
stem cell | 2.74e-07 | 97 |
hematopoietic lineage restricted progenitor cell | 3.97e-07 | 25 |
megakaryocyte progenitor cell | 7.48e-07 | 6 |
megakaryocyte | 7.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.54e-21 | 16 |
bone element | 4.76e-21 | 22 |
skeletal element | 4.76e-21 | 22 |
skeletal system | 4.76e-21 | 22 |
musculoskeletal system | 1.09e-20 | 32 |
hemolymphoid system | 1.26e-13 | 48 |
immune system | 1.26e-13 | 48 |
hematopoietic system | 3.71e-12 | 45 |
blood island | 3.71e-12 | 45 |
connective tissue | 4.38e-11 | 46 |
spleen | 1.57e-08 | 6 |
cavity lining | 1.57e-08 | 6 |
serous membrane | 1.57e-08 | 6 |
gastrointestinal system mesentery | 1.57e-08 | 6 |
stomach region | 1.57e-08 | 6 |
mesentery | 1.57e-08 | 6 |
gastrointestinal system serosa | 1.57e-08 | 6 |
mesentery of stomach | 1.57e-08 | 6 |
gut mesentery | 1.57e-08 | 6 |
dorsal mesentery | 1.57e-08 | 6 |
dorsal mesogastrium | 1.57e-08 | 6 |
peritoneal cavity | 1.57e-08 | 6 |
spleen primordium | 1.57e-08 | 6 |