FFCP PHASE1:Mm9::chr18:25327363..25327385,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:25327363..25327385,-
|short_description=p4@5730494M16Rik
|description=CAGE_peak_4_at_5730494M16Rik_5end
|association_with_transcript=0bp_to_ENSMUST0000002...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66648 | |EntrezGene=66648 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=D3YTV1,E9QLP0,Q66JT5,E9PUD7 | |UniProt=D3YTV1,E9QLP0,Q66JT5,E9PUD7 | ||
|association_with_transcript=0bp_to_ENSMUST00000025118,NM_001004361,NM_001142698,uc008ehf.2,uc012bal.1_5end | |||
|cluster_id=chr18:25327363..25327385,- | |||
|description=CAGE_peak_4_at_5730494M16Rik_5end | |||
|id=chr18:25327363..25327385,- | |||
|ontology_enrichment_celltype=CL:0000117!5.45e-08!23;CL:0000337!5.45e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.34e-10,23;CL:0000337,2.34e-10,23;CL:0000540,9.08e-07,33;CL:0000047,9.08e-07,33;CL:0000031,9.08e-07,33;CL:0000404,9.08e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.32e-11!34;UBERON:0002791!1.91e-09!29;UBERON:0003528!1.91e-09!29;UBERON:0001893!1.91e-09!29;UBERON:0003056!1.98e-09!49;UBERON:0002346!4.22e-09!71;UBERON:0003075!4.22e-09!71;UBERON:0007284!4.22e-09!71;UBERON:0000073!1.11e-08!75;UBERON:0001016!1.11e-08!75;UBERON:0001049!2.20e-08!52;UBERON:0005068!2.20e-08!52;UBERON:0006241!2.20e-08!52;UBERON:0007135!2.20e-08!52;UBERON:0002780!2.21e-08!39;UBERON:0001890!2.21e-08!39;UBERON:0006240!2.21e-08!39;UBERON:0004121!2.24e-08!102;UBERON:0000924!2.24e-08!102;UBERON:0006601!2.24e-08!102;UBERON:0001017!2.33e-08!73;UBERON:0005743!2.33e-08!73;UBERON:0003080!3.12e-08!40;UBERON:0000956!2.47e-07!21;UBERON:0001869!2.47e-07!21;UBERON:0000203!2.47e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.17e-14,34;UBERON:0003528,1.56e-11,29;UBERON:0002791,1.56e-11,29;UBERON:0001893,1.56e-11,29;UBERON:0003056,9.21e-10,49;UBERON:0010371,5.28e-09,73;UBERON:0000956,5.98e-09,21;UBERON:0001869,5.98e-09,21;UBERON:0000203,5.98e-09,21;UBERON:0002346,7.63e-09,64;UBERON:0003075,7.63e-09,64;UBERON:0007284,7.63e-09,64;UBERON:0002780,8.78e-09,39;UBERON:0001890,8.78e-09,39;UBERON:0006240,8.78e-09,39;UBERON:0003080,2.42e-08,40;UBERON:0004121,7.74e-08,95;UBERON:0000924,7.74e-08,95;UBERON:0006601,7.74e-08,95;UBERON:0001049,1.19e-07,52;UBERON:0005068,1.19e-07,52;UBERON:0006241,1.19e-07,52;UBERON:0007135,1.19e-07,52;UBERON:0000073,5.19e-07,54;UBERON:0002619,9.28e-07,17 | |||
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| ||
|short_description=p4@5730494M16Rik | |||
}} | }} |
Latest revision as of 03:02, 27 September 2015
Short description: | p4@5730494M16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_5730494M16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000025118, NM_001004361, NM_001142698, uc008ehf.2, uc012bal.1_5end |
EntrezGene: | 5730494M16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.34e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-10 | 23 |
neuron | 9.08e-07 | 33 |
neuronal stem cell | 9.08e-07 | 33 |
neuroblast | 9.08e-07 | 33 |
electrically signaling cell | 9.08e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.17e-14 | 34 |
brain grey matter | 1.56e-11 | 29 |
regional part of telencephalon | 1.56e-11 | 29 |
telencephalon | 1.56e-11 | 29 |
pre-chordal neural plate | 9.21e-10 | 49 |
ecto-epithelium | 5.28e-09 | 73 |
cerebral cortex | 5.98e-09 | 21 |
cerebral hemisphere | 5.98e-09 | 21 |
pallium | 5.98e-09 | 21 |
neurectoderm | 7.63e-09 | 64 |
neural plate | 7.63e-09 | 64 |
presumptive neural plate | 7.63e-09 | 64 |
regional part of forebrain | 8.78e-09 | 39 |
forebrain | 8.78e-09 | 39 |
future forebrain | 8.78e-09 | 39 |
anterior neural tube | 2.42e-08 | 40 |
ectoderm-derived structure | 7.74e-08 | 95 |
ectoderm | 7.74e-08 | 95 |
presumptive ectoderm | 7.74e-08 | 95 |
neural tube | 1.19e-07 | 52 |
neural rod | 1.19e-07 | 52 |
future spinal cord | 1.19e-07 | 52 |
neural keel | 1.19e-07 | 52 |
regional part of nervous system | 5.19e-07 | 54 |
regional part of cerebral cortex | 9.28e-07 | 17 |