FFCP PHASE1:Mm9::chr13:113825435..113825439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238896 | |EntrezGene=238896 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=371 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z3I0 | |UniProt=D3Z3I0 | ||
|association_with_transcript=-147bp_to_ENSMUST00000109244_5end | |association_with_transcript=-147bp_to_ENSMUST00000109244_5end | ||
|cluster_id=chr13:113825435..113825439,+ | |||
|description=CAGE_peak_1_at_Cdc20b_5end | |description=CAGE_peak_1_at_Cdc20b_5end | ||
|id=chr13:113825435..113825439,+ | |id=chr13:113825435..113825439,+ | ||
|ontology_enrichment_celltype=CL:0002453!2.13e-09!8;CL:0000333!3.63e-07!10;CL:0000095!3.63e-07!10;CL:0000243!3.63e-07!10;CL:0000123!3.63e-07!10;CL:0000125!3.63e-07!10;CL:0000030!3.63e-07!10;CL:0000339!3.63e-07!10;CL:0000128!9.15e-07!6;CL:0000126!9.15e-07!6;CL:0000127!9.15e-07!6 | |ontology_enrichment_celltype=CL:0002453!2.13e-09!8;CL:0000333!3.63e-07!10;CL:0000095!3.63e-07!10;CL:0000243!3.63e-07!10;CL:0000123!3.63e-07!10;CL:0000125!3.63e-07!10;CL:0000030!3.63e-07!10;CL:0000339!3.63e-07!10;CL:0000128!9.15e-07!6;CL:0000126!9.15e-07!6;CL:0000127!9.15e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.97e-36,8;CL:0000333,9.67e-29,10;CL:0000095,9.67e-29,10;CL:0000243,9.67e-29,10;CL:0000123,9.67e-29,10;CL:0000125,9.67e-29,10;CL:0000030,9.67e-29,10;CL:0000339,9.67e-29,10;CL:0000128,6.96e-25,6;CL:0000126,6.96e-25,6;CL:0000127,6.96e-25,6;CL:0002605,4.84e-13,2;CL:0002604,4.84e-13,2;CL:0000878,5.55e-13,2;CL:0000129,5.55e-13,2;CL:0002194,6.36e-07,4;CL:0000766,6.36e-07,4;CL:0000234,6.36e-07,4;CL:0000576,6.36e-07,4;CL:0000235,6.36e-07,4;CL:0000864,6.36e-07,4;CL:0002009,6.36e-07,4;CL:0000040,6.36e-07,4;CL:0000559,6.36e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.24e-12!14;UBERON:0000117!1.24e-12!14;UBERON:0000171!1.24e-12!14;UBERON:0000170!1.24e-12!14;UBERON:0005597!1.24e-12!14;UBERON:0000118!1.24e-12!14;UBERON:0000065!6.57e-11!41;UBERON:0001004!1.72e-10!42;UBERON:0005153!8.81e-10!17;UBERON:0005178!8.81e-10!17;UBERON:0005181!8.81e-10!17;UBERON:0002224!8.81e-10!17;UBERON:0000915!8.81e-10!17;UBERON:0008947!8.81e-10!17;UBERON:0003258!8.81e-10!17 | |ontology_enrichment_uberon=UBERON:0002048!1.24e-12!14;UBERON:0000117!1.24e-12!14;UBERON:0000171!1.24e-12!14;UBERON:0000170!1.24e-12!14;UBERON:0005597!1.24e-12!14;UBERON:0000118!1.24e-12!14;UBERON:0000065!6.57e-11!41;UBERON:0001004!1.72e-10!42;UBERON:0005153!8.81e-10!17;UBERON:0005178!8.81e-10!17;UBERON:0005181!8.81e-10!17;UBERON:0002224!8.81e-10!17;UBERON:0000915!8.81e-10!17;UBERON:0008947!8.81e-10!17;UBERON:0003258!8.81e-10!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.41e-15,14;UBERON:0000117,7.41e-15,14;UBERON:0000171,7.41e-15,14;UBERON:0000170,7.41e-15,14;UBERON:0005597,7.41e-15,14;UBERON:0000118,7.41e-15,14;UBERON:0005153,3.52e-12,17;UBERON:0005178,3.52e-12,17;UBERON:0005181,3.52e-12,17;UBERON:0002224,3.52e-12,17;UBERON:0000915,3.52e-12,17;UBERON:0008947,3.52e-12,17;UBERON:0003258,3.52e-12,17;UBERON:0005157,2.65e-10,20;UBERON:0000310,9.21e-10,6;UBERON:0001443,9.21e-10,6;UBERON:0001954,3.07e-08,7;UBERON:0003022,3.07e-08,7;UBERON:0002421,3.07e-08,7;UBERON:0000349,3.07e-08,7;UBERON:0002600,3.07e-08,7 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.48840250208714,2.85592037554813,5.05517737593137,1.81982348112971,4.31257693094915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,9.98967593836042,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,2.37643120085263,5.63256595892405,7.03526281255626,2.85652369063216,0.975668239288994,0.472905432318573,0.8858587585951,0.478364305972461,0.327726629431476,1.38147985492716,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.486213434136588,0,0,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.576226371643824,0.746661096422973,0.952587382566147,0.463537303779422,0.964546102318525,0,0.883193520806384,1.71434626192708,0.532427418478012,0.238436189947321,0.145346416632329,0.846984423737976,0.592302255241736,0,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.48840250208714,2.85592037554813,5.05517737593137,1.81982348112971,4.31257693094915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,9.98967593836042,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,2.37643120085263,5.63256595892405,7.03526281255626,2.85652369063216,0.975668239288994,0.472905432318573,0.8858587585951,0.478364305972461,0.327726629431476,1.38147985492716,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.486213434136588,0,0,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.576226371643824,0.746661096422973,0.952587382566147,0.463537303779422,0.964546102318525,0,0.883193520806384,1.71434626192708,0.532427418478012,0.238436189947321,0.145346416632329,0.846984423737976,0.592302255241736,0,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p1@Cdc20b | |short_description=p1@Cdc20b | ||
}} | }} |
Latest revision as of 03:15, 27 September 2015
Short description: | p1@Cdc20b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdc20b_5end |
Coexpression cluster: | MCL_coexpression_mm9:371 |
Association with transcript: | -147bp_to_ENSMUST00000109244_5end |
EntrezGene: | Cdc20b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.97e-36 | 8 |
migratory neural crest cell | 9.67e-29 | 10 |
neuron associated cell | 9.67e-29 | 10 |
glial cell (sensu Vertebrata) | 9.67e-29 | 10 |
neuron associated cell (sensu Vertebrata) | 9.67e-29 | 10 |
glial cell | 9.67e-29 | 10 |
glioblast | 9.67e-29 | 10 |
glioblast (sensu Vertebrata) | 9.67e-29 | 10 |
oligodendrocyte | 6.96e-25 | 6 |
macroglial cell | 6.96e-25 | 6 |
astrocyte | 6.96e-25 | 6 |
astrocyte of the cerebral cortex | 4.84e-13 | 2 |
astrocyte of the hippocampus | 4.84e-13 | 2 |
central nervous system macrophage | 5.55e-13 | 2 |
microglial cell | 5.55e-13 | 2 |
monopoietic cell | 6.36e-07 | 4 |
myeloid leukocyte | 6.36e-07 | 4 |
phagocyte | 6.36e-07 | 4 |
monocyte | 6.36e-07 | 4 |
macrophage | 6.36e-07 | 4 |
tissue-resident macrophage | 6.36e-07 | 4 |
macrophage dendritic cell progenitor | 6.36e-07 | 4 |
monoblast | 6.36e-07 | 4 |
promonocyte | 6.36e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung | 7.41e-15 | 14 |
respiratory tube | 7.41e-15 | 14 |
respiration organ | 7.41e-15 | 14 |
pair of lungs | 7.41e-15 | 14 |
lung primordium | 7.41e-15 | 14 |
lung bud | 7.41e-15 | 14 |
epithelial bud | 3.52e-12 | 17 |
thoracic cavity element | 3.52e-12 | 17 |
thoracic segment organ | 3.52e-12 | 17 |
thoracic cavity | 3.52e-12 | 17 |
thoracic segment of trunk | 3.52e-12 | 17 |
respiratory primordium | 3.52e-12 | 17 |
endoderm of foregut | 3.52e-12 | 17 |
epithelial fold | 2.65e-10 | 20 |
breast | 9.21e-10 | 6 |
chest | 9.21e-10 | 6 |
Ammon's horn | 3.07e-08 | 7 |
lobe parts of cerebral cortex | 3.07e-08 | 7 |
hippocampal formation | 3.07e-08 | 7 |
limbic system | 3.07e-08 | 7 |
limbic lobe | 3.07e-08 | 7 |