FFCP PHASE2:Mm9::chrX:132277225..132277283,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:494468,entrezgene:67298 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q3UZB0,uniprot:Q5U4C1,unip...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=494468,67298 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q3UZB0,Q5U4C1,Q6PD32 | ||
|association_with_transcript=0bp_to_ENSMUST00000096321,ENSMUST00000113144,ENSMUST00000113145,ENSMUST00000113147,ENSMUST00000128847,ENSMUST00000143034,ENSMUST00000149595,NM_001004359,NM_001005385,NM_001009575,NM_026081,uc009uhk.1,uc009uhl.2,uc009uhm.1,uc009uhn.1,uc009uho.1,uc009uhp.1,uc009uhq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000096321,ENSMUST00000113144,ENSMUST00000113145,ENSMUST00000113147,ENSMUST00000128847,ENSMUST00000143034,ENSMUST00000149595,NM_001004359,NM_001005385,NM_001009575,NM_026081,uc009uhk.1,uc009uhl.2,uc009uhm.1,uc009uhn.1,uc009uho.1,uc009uhp.1,uc009uhq.1_5end | ||
|cluster_id=chrX:132277225..132277283,+ | |cluster_id=chrX:132277225..132277283,+ | ||
Latest revision as of 14:29, 1 October 2015
| Short description: | p1@Armcx5, p1@Gprasp1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Armcx5_5end, CAGE_peak_1_at_Gprasp1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | 0bp_to_ENSMUST00000096321, ENSMUST00000113144, ENSMUST00000113145, ENSMUST00000113147, ENSMUST00000128847, ENSMUST00000143034, ENSMUST00000149595, NM_001004359, NM_001005385, NM_001009575, NM_026081, uc009uhk.1, uc009uhl.2, uc009uhm.1, uc009uhn.1, uc009uho.1, uc009uhp.1, uc009uhq.1_5end |
| EntrezGene: | 494468,67298 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ecto-epithelium | 3.17e-10 | 73 |
| regional part of nervous system | 3.39e-09 | 54 |
| structure with developmental contribution from neural crest | 8.68e-09 | 92 |
| neurectoderm | 1.49e-08 | 64 |
| neural plate | 1.49e-08 | 64 |
| presumptive neural plate | 1.49e-08 | 64 |
| neural tube | 2.74e-08 | 52 |
| neural rod | 2.74e-08 | 52 |
| future spinal cord | 2.74e-08 | 52 |
| neural keel | 2.74e-08 | 52 |
| ectoderm-derived structure | 3.60e-08 | 95 |
| ectoderm | 3.60e-08 | 95 |
| presumptive ectoderm | 3.60e-08 | 95 |
| anatomical conduit | 8.92e-08 | 122 |
| occipital lobe | 2.05e-07 | 10 |
| visual cortex | 2.05e-07 | 10 |
| neocortex | 2.05e-07 | 10 |
| gray matter | 2.16e-07 | 34 |
| pre-chordal neural plate | 2.98e-07 | 49 |
| brain | 4.97e-07 | 47 |
| future brain | 4.97e-07 | 47 |
| tube | 7.61e-07 | 114 |
