FFCP PHASE1:Mm9::chr1:80755111..80755133,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:80755111..80755133,- to FFCP PHASE1:Mm9::chr1:80755111..80755133,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=210293 | |EntrezGene=210293 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1398 | |||
|TSSclassifier=NA | |||
|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0 | |UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0 | ||
|association_with_transcript=0bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end | |||
|cluster_id=chr1:80755111..80755133,- | |||
|description=CAGE_peak_3_at_Dock10_5end | |||
|id=chr1:80755111..80755133,- | |||
|ontology_enrichment_celltype=CL:0000791!1.97e-07!9;CL:0000789!1.97e-07!9;CL:0002420!1.97e-07!9;CL:0002419!1.97e-07!9;CL:0000790!1.97e-07!9;CL:0000838!2.07e-07!12;CL:0000084!4.75e-07!11;CL:0000827!4.75e-07!11;CL:0000988!6.26e-07!32;CL:0002032!6.26e-07!32;CL:0000037!6.26e-07!32;CL:0000566!6.26e-07!32;CL:0000837!6.26e-07!32;CL:0000624!9.63e-07!8;CL:0000542!9.94e-07!13;CL:0000051!9.94e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.66e-08,32;CL:0002032,3.66e-08,32;CL:0000037,3.66e-08,32;CL:0000837,3.66e-08,32;CL:0000791,1.08e-07,9;CL:0000789,1.08e-07,9;CL:0002420,1.08e-07,9;CL:0002419,1.08e-07,9;CL:0000790,1.08e-07,9;CL:0000838,1.14e-07,12;CL:0000084,2.71e-07,11;CL:0000827,2.71e-07,11;CL:0000624,5.66e-07,8;CL:0000542,5.86e-07,13;CL:0000051,5.86e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.79e-12!45;UBERON:0003061!6.79e-12!45;UBERON:0002193!8.02e-12!48;UBERON:0004177!4.26e-11!29;UBERON:0002370!9.30e-09!23;UBERON:0000974!9.30e-09!23;UBERON:0004807!9.30e-09!23;UBERON:0005058!9.30e-09!23;UBERON:0003351!9.30e-09!23;UBERON:0009113!9.30e-09!23;UBERON:0003295!9.30e-09!23;UBERON:0009722!9.30e-09!23;UBERON:0005562!9.30e-09!23;UBERON:0007690!9.30e-09!23;UBERON:0003408!1.27e-08!24;UBERON:0006562!6.56e-08!24;UBERON:0001557!6.56e-08!24;UBERON:0001042!6.56e-08!24;UBERON:0008814!6.56e-08!24;UBERON:0009145!6.56e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-13,45;UBERON:0003061,1.05e-13,45;UBERON:0002193,2.54e-13,48;UBERON:0002405,2.54e-13,48;UBERON:0004177,3.45e-12,29;UBERON:0005057,3.45e-12,29;UBERON:0002370,9.91e-10,23;UBERON:0000974,9.91e-10,23;UBERON:0004807,9.91e-10,23;UBERON:0005058,9.91e-10,23;UBERON:0003351,9.91e-10,23;UBERON:0009113,9.91e-10,23;UBERON:0003295,9.91e-10,23;UBERON:0009722,9.91e-10,23;UBERON:0005562,9.91e-10,23;UBERON:0007690,9.91e-10,23;UBERON:0003408,1.44e-09,24;UBERON:0006562,8.45e-09,24;UBERON:0001557,8.45e-09,24;UBERON:0001042,8.45e-09,24;UBERON:0008814,8.45e-09,24;UBERON:0009145,8.45e-09,24;UBERON:0000077,1.82e-07,35 | |||
|phase1_expression=2.5623815536767,0,0.909998478779072,0,0,0.839396359559449,0,21.3053483678601,52.6549820847234,54.3029701067025,13.8686554262659,12.5242289622678,27.2209160590617,28.5864715910121,4.66353666541928,5.06188168474565,0,10.567982539501,12.614527891728,9.33657233955666,2.21112554392781,1.58865521921416,3.13439746966722,1.43993180514066,0.91763712426868,0,0.430761996159075,0.430942465371778,0.190023419456374,1.51218077855958,1.55211357458713,0,0,0,0,0,0,5.85944283031671,10.9386948233332,14.1351410872926,4.1176204162171,6.14740936462601,6.79714494243615,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,5.36904339384756,32.6412963905105,36.2981303073861,1.02903774414379,1.14613375975503,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0.889294796111139,1.7997994345628,2.96659908770092,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,3.14216082844184,1.76694832761291,0.979926393719632,0,0,4.40463523997555,5.36286819957788,4.30098293117482,0.131886287730194,0.0914876436024097,0,2.79182999001381,2.8138130501584,6.1119299110724,3.53554302568401,2.98980529678116,1.1183966749518,1.13589289999776,2.56943304363071,0,0.860423876981386,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0.985903938436763,0,0,0,0,0,0,1.48439043634778,28.2242293175417,2.9688427812965,1.21439728736295,2.13125834818499,1.61430848079241,1.20578112442098,2.70454026412121,1.50799909595611,0.494389935468748,1.01219549843938,9.73071607144862,3.88240439873782,3.75430581382669,5.33362778448744,1.86391761218122,1.46390398505774,1.25668024088073,0.255457055208591,11.8616973260861,10.1983464268879,8.89491589511453,6.89036941262184,10.0650132620098,2.76439574648302,2.78118912307642,3.58001640262463,4.57133698031032,8.92326946872667,1.62942982160506,3.85661608891288,0.505445516867349,1.26265113531884,1.17108398666433,0.689706313300419,0.540186389416048,2.26057226753573,1.2246569847239,1.5373646434182,0.843315521037559,1.03481348295606,0,2.64748512234947,1.23165786914764,1.7535658594206,3.33656699070717,3.48252166522167,3.49829631893504,1.99034266818493,13.3420505589515,10.0365683774739,10.7982129770325,0.621377317606506,0.938104239924385,1.2604344302271,2.13070262026689,1.18058539048442,2.1597395804233,0.697601834251224,0.268273401399619,1.28441876603886,1.15191894939436,0.820837320395476,0.891756905004413,0.292399974850665,1.3173006917463,0.268412837520744,8.41159794256509,0.514523061896422,2.64335026387038,0.264450566663544,1.06644125267617,1.39342003116263,1.03093969057675,0.605050573870028,0.444756087689741,1.33157938278791,1.42358718463353,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0,0.216138049874694,0.796565093017469,0.758671603812327,2.51346727741403,2.25415471346161,0.407302655690628,2.13347735884388,1.8936671370386,2.52946148497029,0.738050739898011,0.627994911365499,0.493588655687202,0,0.333690211432188,0.982794975566015,0.449724224769707,1.01430060694251,0.964708639009667,1.01850340712568,3.16465751195892,1.78348749452539,1.09824565275233,1.43768206527355,1.86070473834252,2.49630138491648,1.26289438973556,0.358794827043824,0,3.51031061316549,0.37898282354097,1.30371981153621,1.18821560042632,2.11221223459652,1.17254380209271,2.14239276797412,1.95133647857799,2.52216230569906,1.32878813789265,2.87018583583477,2.62181303545181,3.45369963731791,2.74833211304872,9.04747703635634,4.89515115436839,0.491764273019036,0.551873492609465,6.42202359951168,9.61135830056066,0,1.51482556322624,1.57754109708128,1.56175497718655,3.01592756825919,4.54040716109849,4.01037613348309,6.51076020814315,2.02405350837447,4.38383786866968,4.34816555741176,13.1741739732941,0.99358059645788,1.06839362200353,3.25773918707152,0.824850614862677,1.32745138339963,0.971122544619926,2.11626489875326,1.13163047853539,0.885905678642318,0.307435147943927,1.03371317267288,1.09060118843252,2.85197902707777,1.8962205476149,1.05418608574999,0,0,1.08036656418786,0.517434735131018,0.214337035031592,0.177340233642274,1.07021290561242,0.987294123612726,0.608929898229199,0.938686832254841,0,0.220528398054962,0.8244312647074,2.42196640043858,2.95533332147964,1.67121281604391,1.31312719796049,0.874442509889552,7.41701208042039,5.98048082792484,4.12773735926445,6.2966139305702,5.08594833912666,5.60446333656203,7.77845788902177,8.83887835968048,7.83728133012485,7.46279858543889,0,0.790839983952838,2.23651413839534,1.51207477150522,1.25452977608681,0.218362563746178,1.34864346384821,1.1571483801547,0,0.777689839750757,1.86401793926078,0.56369293868419,1.79419855252775,0.827292452285488,1.75006069509643,1.93739735216597,1.18269287843545,1.64300134104056,0.5208175393758,0.209718688851422,0.241584120826006,0,15.8005560314089,4.45995473638361,2.97861775777999,6.49604114888975,11.0996551313838,10.3314304486258,13.7022812452764,12.1105412283153,13.1256384932592,14.707913684415,13.4098826231998,13.0593560191268,15.9711657122947,18.700304349051,0.226730383615211,0,0,0,0.19318959403219,0.93841237725591,0.73260649706906,0.214368379079066,0.501572104035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| |phase1_expression=2.5623815536767,0,0.909998478779072,0,0,0.839396359559449,0,21.3053483678601,52.6549820847234,54.3029701067025,13.8686554262659,12.5242289622678,27.2209160590617,28.5864715910121,4.66353666541928,5.06188168474565,0,10.567982539501,12.614527891728,9.33657233955666,2.21112554392781,1.58865521921416,3.13439746966722,1.43993180514066,0.91763712426868,0,0.430761996159075,0.430942465371778,0.190023419456374,1.51218077855958,1.55211357458713,0,0,0,0,0,0,5.85944283031671,10.9386948233332,14.1351410872926,4.1176204162171,6.14740936462601,6.79714494243615,0,0,0,0,0,0,0.58328969722285,0.139986421625363,0,5.36904339384756,32.6412963905105,36.2981303073861,1.02903774414379,1.14613375975503,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0.889294796111139,1.7997994345628,2.96659908770092,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,3.14216082844184,1.76694832761291,0.979926393719632,0,0,4.40463523997555,5.36286819957788,4.30098293117482,0.131886287730194,0.0914876436024097,0,2.79182999001381,2.8138130501584,6.1119299110724,3.53554302568401,2.98980529678116,1.1183966749518,1.13589289999776,2.56943304363071,0,0.860423876981386,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0.985903938436763,0,0,0,0,0,0,1.48439043634778,28.2242293175417,2.9688427812965,1.21439728736295,2.13125834818499,1.61430848079241,1.20578112442098,2.70454026412121,1.50799909595611,0.494389935468748,1.01219549843938,9.73071607144862,3.88240439873782,3.75430581382669,5.33362778448744,1.86391761218122,1.46390398505774,1.25668024088073,0.255457055208591,11.8616973260861,10.1983464268879,8.89491589511453,6.89036941262184,10.0650132620098,2.76439574648302,2.78118912307642,3.58001640262463,4.57133698031032,8.92326946872667,1.62942982160506,3.85661608891288,0.505445516867349,1.26265113531884,1.17108398666433,0.689706313300419,0.540186389416048,2.26057226753573,1.2246569847239,1.5373646434182,0.843315521037559,1.03481348295606,0,2.64748512234947,1.23165786914764,1.7535658594206,3.33656699070717,3.48252166522167,3.49829631893504,1.99034266818493,13.3420505589515,10.0365683774739,10.7982129770325,0.621377317606506,0.938104239924385,1.2604344302271,2.13070262026689,1.18058539048442,2.1597395804233,0.697601834251224,0.268273401399619,1.28441876603886,1.15191894939436,0.820837320395476,0.891756905004413,0.292399974850665,1.3173006917463,0.268412837520744,8.41159794256509,0.514523061896422,2.64335026387038,0.264450566663544,1.06644125267617,1.39342003116263,1.03093969057675,0.605050573870028,0.444756087689741,1.33157938278791,1.42358718463353,0.494096864172033,1.50801125280162,0.596869416123452,0.38992817423824,0,0.216138049874694,0.796565093017469,0.758671603812327,2.51346727741403,2.25415471346161,0.407302655690628,2.13347735884388,1.8936671370386,2.52946148497029,0.738050739898011,0.627994911365499,0.493588655687202,0,0.333690211432188,0.982794975566015,0.449724224769707,1.01430060694251,0.964708639009667,1.01850340712568,3.16465751195892,1.78348749452539,1.09824565275233,1.43768206527355,1.86070473834252,2.49630138491648,1.26289438973556,0.358794827043824,0,3.51031061316549,0.37898282354097,1.30371981153621,1.18821560042632,2.11221223459652,1.17254380209271,2.14239276797412,1.95133647857799,2.52216230569906,1.32878813789265,2.87018583583477,2.62181303545181,3.45369963731791,2.74833211304872,9.04747703635634,4.89515115436839,0.491764273019036,0.551873492609465,6.42202359951168,9.61135830056066,0,1.51482556322624,1.57754109708128,1.56175497718655,3.01592756825919,4.54040716109849,4.01037613348309,6.51076020814315,2.02405350837447,4.38383786866968,4.34816555741176,13.1741739732941,0.99358059645788,1.06839362200353,3.25773918707152,0.824850614862677,1.32745138339963,0.971122544619926,2.11626489875326,1.13163047853539,0.885905678642318,0.307435147943927,1.03371317267288,1.09060118843252,2.85197902707777,1.8962205476149,1.05418608574999,0,0,1.08036656418786,0.517434735131018,0.214337035031592,0.177340233642274,1.07021290561242,0.987294123612726,0.608929898229199,0.938686832254841,0,0.220528398054962,0.8244312647074,2.42196640043858,2.95533332147964,1.67121281604391,1.31312719796049,0.874442509889552,7.41701208042039,5.98048082792484,4.12773735926445,6.2966139305702,5.08594833912666,5.60446333656203,7.77845788902177,8.83887835968048,7.83728133012485,7.46279858543889,0,0.790839983952838,2.23651413839534,1.51207477150522,1.25452977608681,0.218362563746178,1.34864346384821,1.1571483801547,0,0.777689839750757,1.86401793926078,0.56369293868419,1.79419855252775,0.827292452285488,1.75006069509643,1.93739735216597,1.18269287843545,1.64300134104056,0.5208175393758,0.209718688851422,0.241584120826006,0,15.8005560314089,4.45995473638361,2.97861775777999,6.49604114888975,11.0996551313838,10.3314304486258,13.7022812452764,12.1105412283153,13.1256384932592,14.707913684415,13.4098826231998,13.0593560191268,15.9711657122947,18.700304349051,0.226730383615211,0,0,0,0.19318959403219,0.93841237725591,0.73260649706906,0.214368379079066,0.501572104035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| ||
|short_description=p3@Dock10 | |||
}} | }} |
Latest revision as of 16:01, 1 October 2015
Short description: | p3@Dock10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dock10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1398 |
Association with transcript: | 0bp_to_ENSMUST00000077946, ENSMUST00000097681, ENSMUST00000166732, ENSMUST00000169279, NM_175291, uc007brg.2, uc007bri.2_5end |
EntrezGene: | Dock10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.66e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.66e-08 | 32 |
hematopoietic stem cell | 3.66e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.66e-08 | 32 |
mature alpha-beta T cell | 1.08e-07 | 9 |
alpha-beta T cell | 1.08e-07 | 9 |
immature T cell | 1.08e-07 | 9 |
mature T cell | 1.08e-07 | 9 |
immature alpha-beta T cell | 1.08e-07 | 9 |
lymphoid lineage restricted progenitor cell | 1.14e-07 | 12 |
T cell | 2.71e-07 | 11 |
pro-T cell | 2.71e-07 | 11 |
CD4-positive, alpha-beta T cell | 5.66e-07 | 8 |
lymphocyte | 5.86e-07 | 13 |
common lymphoid progenitor | 5.86e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-13 | 45 |
blood island | 1.05e-13 | 45 |
hemolymphoid system | 2.54e-13 | 48 |
immune system | 2.54e-13 | 48 |
hemopoietic organ | 3.45e-12 | 29 |
immune organ | 3.45e-12 | 29 |
thymus | 9.91e-10 | 23 |
neck | 9.91e-10 | 23 |
respiratory system epithelium | 9.91e-10 | 23 |
hemolymphoid system gland | 9.91e-10 | 23 |
pharyngeal epithelium | 9.91e-10 | 23 |
thymic region | 9.91e-10 | 23 |
pharyngeal gland | 9.91e-10 | 23 |
entire pharyngeal arch endoderm | 9.91e-10 | 23 |
thymus primordium | 9.91e-10 | 23 |
early pharyngeal endoderm | 9.91e-10 | 23 |
gland of gut | 1.44e-09 | 24 |
pharynx | 8.45e-09 | 24 |
upper respiratory tract | 8.45e-09 | 24 |
chordate pharynx | 8.45e-09 | 24 |
pharyngeal arch system | 8.45e-09 | 24 |
pharyngeal region of foregut | 8.45e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 1.82e-07 | 35 |