Personal tools

FFCP PHASE1:Mm9::chrX:151650987..151650999,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20229
|EntrezGene=20229
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=P48026
|UniProt=P48026
|association_with_transcript=0bp_to_ENSMUST00000026318,ENSMUST00000152463_5end
|association_with_transcript=0bp_to_ENSMUST00000026318,ENSMUST00000152463_5end
|cluster_id=chrX:151650987..151650999,-
|description=CAGE_peak_4_at_Sat1_5end
|description=CAGE_peak_4_at_Sat1_5end
|id=chrX:151650987..151650999,-
|id=chrX:151650987..151650999,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-07,23;CL:0000337,2.18e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.85e-09!63;UBERON:0001017!8.98e-09!73;UBERON:0005743!8.98e-09!73;UBERON:0002346!9.16e-09!71;UBERON:0003075!9.16e-09!71;UBERON:0007284!9.16e-09!71;UBERON:0004121!3.30e-08!102;UBERON:0000924!3.30e-08!102;UBERON:0006601!3.30e-08!102;UBERON:0001049!3.50e-08!52;UBERON:0005068!3.50e-08!52;UBERON:0006241!3.50e-08!52;UBERON:0007135!3.50e-08!52;UBERON:0000073!5.73e-08!75;UBERON:0001016!5.73e-08!75;UBERON:0000955!2.35e-07!50;UBERON:0006238!2.35e-07!50;UBERON:0002616!3.31e-07!49
|ontology_enrichment_uberon=UBERON:0000033!8.85e-09!63;UBERON:0001017!8.98e-09!73;UBERON:0005743!8.98e-09!73;UBERON:0002346!9.16e-09!71;UBERON:0003075!9.16e-09!71;UBERON:0007284!9.16e-09!71;UBERON:0004121!3.30e-08!102;UBERON:0000924!3.30e-08!102;UBERON:0006601!3.30e-08!102;UBERON:0001049!3.50e-08!52;UBERON:0005068!3.50e-08!52;UBERON:0006241!3.50e-08!52;UBERON:0007135!3.50e-08!52;UBERON:0000073!5.73e-08!75;UBERON:0001016!5.73e-08!75;UBERON:0000955!2.35e-07!50;UBERON:0006238!2.35e-07!50;UBERON:0002616!3.31e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.70e-10,95;UBERON:0000924,7.70e-10,95;UBERON:0006601,7.70e-10,95;UBERON:0002346,9.32e-10,64;UBERON:0003075,9.32e-10,64;UBERON:0007284,9.32e-10,64;UBERON:0001017,1.27e-09,73;UBERON:0010371,1.85e-09,73;UBERON:0000073,4.71e-09,54;UBERON:0001016,6.68e-09,75;UBERON:0001049,1.34e-08,52;UBERON:0005068,1.34e-08,52;UBERON:0006241,1.34e-08,52;UBERON:0007135,1.34e-08,52;UBERON:0010314,7.65e-08,92;UBERON:0000955,5.60e-07,47;UBERON:0006238,5.60e-07,47;UBERON:0002616,8.32e-07,46
|phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,0,0,1.34303417529512,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,1.02730780935303,0.478632953972018,0.513602189793617,1.13646523144697,0,0.404950534779652,0.699561878128147,0.788655413395594,1.64537320326887,0.42438965179803,0.425216450755349,0.794327609607082,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,0.252030129759931,1.55211357458713,1.27006134691926,0,0,0,0.831173226792462,0.816677425049476,7.53356935326434,4.6880120671428,11.5175223674236,14.7057872007754,12.9778642142105,14.0798002379035,1.76255545165808,2.23029248682932,1.10128051297009,2.34717403304412,1.52617609466313,0.439372365468944,1.1665793944457,1.67983705950435,2.87505128729943,1.67782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.11596391708813,0,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.03689612308478,1.21505344498522,1.47227472945967,3.71346279724945,2.20868540951614,1.46988959057945,1.62937300731002,0,1.10115880999389,2.17068474744819,1.38245879930619,1.97829431595291,3.56801810049398,3.64639359389732,2.23346399201105,3.37657566019008,1.68078072554491,0.589257170947335,2.13557521198654,2.60959224155421,0.075726193333184,0.604572480854284,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.445326417194474,1.38788261412909,0,1.15307748628029,1.05505848386836,1.17588707135705,0.753999547978053,1.48316980640624,0.289198713839823,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,1.46390398505774,1.46612694769419,0.510914110417183,1.91704199209472,3.59941638596045,2.54140454146129,1.9472783122627,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,0.83115217823824,1.1356888414743,0.712875546952214,0.497627882440372,0.252722758433675,0.841767423545896,0.780722657776222,2.5289231487682,1.44049703844279,1.80845781402858,1.97305847538851,2.3060469651273,1.49922759295566,1.55222022443409,1.07783996466421,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,1.39300866608867,0.823128545631774,1.19420560091096,7.02213187313235,3.08817488537658,2.27330799516474,0.207125772535502,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,1.69693824176116,1.62773761325285,2.41446061259657,1.86824547787471,0.822799249567402,1.97000956894914,1.05389452409612,0.730999937126662,0.878200461164203,0.402619256281115,1.05144974282064,0.514523061896422,0,0.528901133327089,0.853153002140936,0.232236671860439,0.515469845288373,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,1.70701110857774,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.26244475802573,1.70738650235495,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,0.500535317148282,0.196558995113203,0,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0.717589654087649,0.964887042726734,0.739012760666419,0.947457058852424,0.325929952884052,0.678980343100753,1.87752198630802,0.335012514883631,0.714130922658041,1.17080188714679,1.7339865851681,2.21464689648775,1.59454768657487,1.14704320301017,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,0,1.65562047782839,2.40825884981688,1.75817529888305,0.327869890753351,1.00988370881749,0.94652465824877,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,1.28528526568723,0.709700426041343,1.06839362200353,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,0,1.03135543248187,2.04263763452273,0.900305470156551,1.68166288917581,0.857348140126369,0.886701168211368,1.24858172321449,2.79733335023606,2.74018454203139,0.704015124191131,3.1774810629573,1.10264199027481,0.32977250588296,0.807322133479528,1.14594557363496,0.835606408021955,1.14898629821543,0.291480836629851,1.48340241608408,0.683483523191411,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,2.48759952847963,0,0.790839983952838,1.01659733563424,0.86404272657441,0.836353184057875,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,1.64300134104056,1.3020438484395,1.46803082195995,0.966336483304024,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,0.649604114888975,0.716106782669926,1.39076948346885,0.240390899039938,0.738447635872886,1.51449674922221,1.447929326445,1.61321896218945,0.877120926657772,1.05833025804362,1.28564592399726,0.453460767230423,0.665957860122194,0.269141569828427,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0.428736758158132,2.50786052017682,2.25900737046827,2.30162618253588,0.572895513439397,1.03111909406213,2.05524755931193,0,2.70009000092722,2.70192721934532,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.33348036680969,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,1.591905626988,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,1.15745532278223,0,0.588795680537589,1.02860775715625,0.887379030796687,1.66905332963125,0.872078499793971,0.752875043322645,1.18460451048347,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.985044823755635,1.63692417267876,1.08455788830176,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.661774257358546,0.695603506861264
|phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,0,0,1.34303417529512,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,1.02730780935303,0.478632953972018,0.513602189793617,1.13646523144697,0,0.404950534779652,0.699561878128147,0.788655413395594,1.64537320326887,0.42438965179803,0.425216450755349,0.794327609607082,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,0.252030129759931,1.55211357458713,1.27006134691926,0,0,0,0.831173226792462,0.816677425049476,7.53356935326434,4.6880120671428,11.5175223674236,14.7057872007754,12.9778642142105,14.0798002379035,1.76255545165808,2.23029248682932,1.10128051297009,2.34717403304412,1.52617609466313,0.439372365468944,1.1665793944457,1.67983705950435,2.87505128729943,1.67782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.11596391708813,0,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.03689612308478,1.21505344498522,1.47227472945967,3.71346279724945,2.20868540951614,1.46988959057945,1.62937300731002,0,1.10115880999389,2.17068474744819,1.38245879930619,1.97829431595291,3.56801810049398,3.64639359389732,2.23346399201105,3.37657566019008,1.68078072554491,0.589257170947335,2.13557521198654,2.60959224155421,0.075726193333184,0.604572480854284,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.445326417194474,1.38788261412909,0,1.15307748628029,1.05505848386836,1.17588707135705,0.753999547978053,1.48316980640624,0.289198713839823,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,1.46390398505774,1.46612694769419,0.510914110417183,1.91704199209472,3.59941638596045,2.54140454146129,1.9472783122627,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,0.83115217823824,1.1356888414743,0.712875546952214,0.497627882440372,0.252722758433675,0.841767423545896,0.780722657776222,2.5289231487682,1.44049703844279,1.80845781402858,1.97305847538851,2.3060469651273,1.49922759295566,1.55222022443409,1.07783996466421,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,1.39300866608867,0.823128545631774,1.19420560091096,7.02213187313235,3.08817488537658,2.27330799516474,0.207125772535502,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,1.69693824176116,1.62773761325285,2.41446061259657,1.86824547787471,0.822799249567402,1.97000956894914,1.05389452409612,0.730999937126662,0.878200461164203,0.402619256281115,1.05144974282064,0.514523061896422,0,0.528901133327089,0.853153002140936,0.232236671860439,0.515469845288373,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,1.70701110857774,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.26244475802573,1.70738650235495,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,0.500535317148282,0.196558995113203,0,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0.717589654087649,0.964887042726734,0.739012760666419,0.947457058852424,0.325929952884052,0.678980343100753,1.87752198630802,0.335012514883631,0.714130922658041,1.17080188714679,1.7339865851681,2.21464689648775,1.59454768657487,1.14704320301017,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,0,1.65562047782839,2.40825884981688,1.75817529888305,0.327869890753351,1.00988370881749,0.94652465824877,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,1.28528526568723,0.709700426041343,1.06839362200353,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,0,1.03135543248187,2.04263763452273,0.900305470156551,1.68166288917581,0.857348140126369,0.886701168211368,1.24858172321449,2.79733335023606,2.74018454203139,0.704015124191131,3.1774810629573,1.10264199027481,0.32977250588296,0.807322133479528,1.14594557363496,0.835606408021955,1.14898629821543,0.291480836629851,1.48340241608408,0.683483523191411,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,2.48759952847963,0,0.790839983952838,1.01659733563424,0.86404272657441,0.836353184057875,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,1.64300134104056,1.3020438484395,1.46803082195995,0.966336483304024,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,0.649604114888975,0.716106782669926,1.39076948346885,0.240390899039938,0.738447635872886,1.51449674922221,1.447929326445,1.61321896218945,0.877120926657772,1.05833025804362,1.28564592399726,0.453460767230423,0.665957860122194,0.269141569828427,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0.428736758158132,2.50786052017682,2.25900737046827,2.30162618253588,0.572895513439397,1.03111909406213,2.05524755931193,0,2.70009000092722,2.70192721934532,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.33348036680969,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,1.591905626988,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,1.15745532278223,0,0.588795680537589,1.02860775715625,0.887379030796687,1.66905332963125,0.872078499793971,0.752875043322645,1.18460451048347,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.985044823755635,1.63692417267876,1.08455788830176,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.661774257358546,0.695603506861264
|short_description=p4@Sat1
|short_description=p4@Sat1
}}
}}

Latest revision as of 17:04, 1 October 2015

Short description:p4@Sat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sat1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000026318, ENSMUST00000152463_5end
EntrezGene:Sat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.18e-0723
neuroblast (sensu Vertebrata)2.18e-0723
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:151650987..151650999,-&oldid=4313094"