FFCP PHASE1:Mm9::chr8:126545352..126545415,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:126545352..126545415,+
|short_description=p1@Urb2
|description=CAGE_peak_1_at_Urb2_5end
|association_with_transcript=0bp_to_ENSMUST00000173168,uc012gmt.1_5...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382038 | |EntrezGene=382038 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=G3UX45 | |UniProt=G3UX45 | ||
|association_with_transcript=0bp_to_ENSMUST00000173168,uc012gmt.1_5end | |||
|cluster_id=chr8:126545352..126545415,+ | |||
|description=CAGE_peak_1_at_Urb2_5end | |||
|id=chr8:126545352..126545415,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.86e-09!25;CL:0000988!1.98e-09!32;CL:0002032!1.98e-09!32;CL:0000037!1.98e-09!32;CL:0000566!1.98e-09!32;CL:0000837!1.98e-09!32;CL:0000542!4.39e-08!13;CL:0000051!4.39e-08!13;CL:0000838!6.75e-08!12;CL:0000084!2.65e-07!11;CL:0000827!2.65e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.86e-09,25;CL:0000988,1.98e-09,32;CL:0002032,1.98e-09,32;CL:0000037,1.98e-09,32;CL:0000837,1.98e-09,32;CL:0000542,4.39e-08,13;CL:0000051,4.39e-08,13;CL:0000838,6.75e-08,12;CL:0000084,2.65e-07,11;CL:0000827,2.65e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.31e-10!29;UBERON:0002370!3.21e-09!23;UBERON:0000974!3.21e-09!23;UBERON:0004807!3.21e-09!23;UBERON:0005058!3.21e-09!23;UBERON:0003351!3.21e-09!23;UBERON:0009113!3.21e-09!23;UBERON:0003295!3.21e-09!23;UBERON:0009722!3.21e-09!23;UBERON:0005562!3.21e-09!23;UBERON:0007690!3.21e-09!23;UBERON:0006562!6.18e-09!24;UBERON:0001557!6.18e-09!24;UBERON:0001042!6.18e-09!24;UBERON:0008814!6.18e-09!24;UBERON:0009145!6.18e-09!24;UBERON:0000072!1.15e-08!27;UBERON:0002390!1.63e-08!45;UBERON:0003061!1.63e-08!45;UBERON:0003408!1.67e-08!24;UBERON:0002193!2.12e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.31e-10,29;UBERON:0005057,4.31e-10,29;UBERON:0000077,5.17e-10,35;UBERON:0002370,3.21e-09,23;UBERON:0000974,3.21e-09,23;UBERON:0004807,3.21e-09,23;UBERON:0005058,3.21e-09,23;UBERON:0003351,3.21e-09,23;UBERON:0009113,3.21e-09,23;UBERON:0003295,3.21e-09,23;UBERON:0009722,3.21e-09,23;UBERON:0005562,3.21e-09,23;UBERON:0007690,3.21e-09,23;UBERON:0006562,6.18e-09,24;UBERON:0001557,6.18e-09,24;UBERON:0001042,6.18e-09,24;UBERON:0008814,6.18e-09,24;UBERON:0009145,6.18e-09,24;UBERON:0000072,1.15e-08,27;UBERON:0002390,1.63e-08,45;UBERON:0003061,1.63e-08,45;UBERON:0003408,1.67e-08,24;UBERON:0002193,2.12e-08,48;UBERON:0002405,2.12e-08,48;UBERON:0000153,5.52e-08,43 | |||
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| ||
|short_description=p1@Urb2 | |||
}} | }} |
Latest revision as of 17:23, 1 October 2015
Short description: | p1@Urb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Urb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000173168, uc012gmt.1_5end |
EntrezGene: | Urb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.86e-09 | 25 |
hematopoietic cell | 1.98e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.98e-09 | 32 |
hematopoietic stem cell | 1.98e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.98e-09 | 32 |
lymphocyte | 4.39e-08 | 13 |
common lymphoid progenitor | 4.39e-08 | 13 |
lymphoid lineage restricted progenitor cell | 6.75e-08 | 12 |
T cell | 2.65e-07 | 11 |
pro-T cell | 2.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.31e-10 | 29 |
immune organ | 4.31e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 5.17e-10 | 35 |
thymus | 3.21e-09 | 23 |
neck | 3.21e-09 | 23 |
respiratory system epithelium | 3.21e-09 | 23 |
hemolymphoid system gland | 3.21e-09 | 23 |
pharyngeal epithelium | 3.21e-09 | 23 |
thymic region | 3.21e-09 | 23 |
pharyngeal gland | 3.21e-09 | 23 |
entire pharyngeal arch endoderm | 3.21e-09 | 23 |
thymus primordium | 3.21e-09 | 23 |
early pharyngeal endoderm | 3.21e-09 | 23 |
pharynx | 6.18e-09 | 24 |
upper respiratory tract | 6.18e-09 | 24 |
chordate pharynx | 6.18e-09 | 24 |
pharyngeal arch system | 6.18e-09 | 24 |
pharyngeal region of foregut | 6.18e-09 | 24 |
segment of respiratory tract | 1.15e-08 | 27 |
hematopoietic system | 1.63e-08 | 45 |
blood island | 1.63e-08 | 45 |
gland of gut | 1.67e-08 | 24 |
hemolymphoid system | 2.12e-08 | 48 |
immune system | 2.12e-08 | 48 |
anterior region of body | 5.52e-08 | 43 |