FFCP PHASE1:Mm9::chr18:74874419..74874428,+: Difference between revisions
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{{FFCP|EntrezGene=17919|HGNC=|MCL_coexpression_id=328|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000122914_5end|description=CAGE_peak_18_at_Myo5b_5end|id=chr18:74874419..74874428,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!9.68e-26!10;UBERON:0000411!9.68e-26!10;UBERON:0001950!9.68e-26!10;UBERON:0002020!2.88e-21!34;UBERON:0000956!2.17e-20!21;UBERON:0001869!2.17e-20!21;UBERON:0000203!2.17e-20!21;UBERON:0002791!1.73e-19!29;UBERON:0003528!1.73e-19!29;UBERON:0001893!1.73e-19!29;UBERON:0002619!4.44e-18!17;UBERON:0002616!6.05e-14!49;UBERON:0002780!9.77e-14!39;UBERON:0001890!9.77e-14!39;UBERON:0006240!9.77e-14!39;UBERON:0000955!1.35e-13!50;UBERON:0006238!1.35e-13!50;UBERON:0003080!2.55e-13!40;UBERON:0001049!9.82e-13!52;UBERON:0005068!9.82e-13!52;UBERON:0006241!9.82e-13!52;UBERON:0007135!9.82e-13!52;UBERON:0001017!9.11e-11!73;UBERON:0005743!9.11e-11!73;UBERON:0000073!2.23e-10!75;UBERON:0001016!2.23e-10!75;UBERON:0003056!2.45e-10!49;UBERON:0000033!4.30e-10!63;UBERON:0002346!1.97e-08!71;UBERON:0003075!1.97e-08!71;UBERON:0007284!1.97e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-27,10;UBERON:0000411,1.23e-27,10;UBERON:0001950,1.23e-27,10;UBERON:0002619,1.88e-23,17;UBERON:0000956,5.01e-19,21;UBERON:0001869,5.01e-19,21;UBERON:0000203,5.01e-19,21;UBERON:0003528,8.05e-14,29;UBERON:0002791,8.05e-14,29;UBERON:0001893,8.05e-14,29;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002020,8.39e-12,34;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0003080,4.84e-10,40;UBERON:0000073,5.73e-10,54;UBERON:0002616,9.82e-09,46;UBERON:0000955,1.51e-08,47;UBERON:0006238,1.51e-08,47;UBERON:0003056,3.37e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0001017,2.40e-07,73;UBERON:0001016,3.81e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,1.14918604276669,0.614426133024974,0,0,0,0,0,0.916789486660861,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.521472960576829,1.27857728665165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.06357760157895,5.72895513439397,3.95262319390481,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.38581844092741,0,0,0,0,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p18@Myo5b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17919 | |||
|HGNC= | |||
|MCL_coexpression_id=328 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENSMUST00000122914_5end | |||
|cluster_id=chr18:74874419..74874428,+ | |||
|description=CAGE_peak_18_at_Myo5b_5end | |||
|id=chr18:74874419..74874428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.68e-26!10;UBERON:0000411!9.68e-26!10;UBERON:0001950!9.68e-26!10;UBERON:0002020!2.88e-21!34;UBERON:0000956!2.17e-20!21;UBERON:0001869!2.17e-20!21;UBERON:0000203!2.17e-20!21;UBERON:0002791!1.73e-19!29;UBERON:0003528!1.73e-19!29;UBERON:0001893!1.73e-19!29;UBERON:0002619!4.44e-18!17;UBERON:0002616!6.05e-14!49;UBERON:0002780!9.77e-14!39;UBERON:0001890!9.77e-14!39;UBERON:0006240!9.77e-14!39;UBERON:0000955!1.35e-13!50;UBERON:0006238!1.35e-13!50;UBERON:0003080!2.55e-13!40;UBERON:0001049!9.82e-13!52;UBERON:0005068!9.82e-13!52;UBERON:0006241!9.82e-13!52;UBERON:0007135!9.82e-13!52;UBERON:0001017!9.11e-11!73;UBERON:0005743!9.11e-11!73;UBERON:0000073!2.23e-10!75;UBERON:0001016!2.23e-10!75;UBERON:0003056!2.45e-10!49;UBERON:0000033!4.30e-10!63;UBERON:0002346!1.97e-08!71;UBERON:0003075!1.97e-08!71;UBERON:0007284!1.97e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-27,10;UBERON:0000411,1.23e-27,10;UBERON:0001950,1.23e-27,10;UBERON:0002619,1.88e-23,17;UBERON:0000956,5.01e-19,21;UBERON:0001869,5.01e-19,21;UBERON:0000203,5.01e-19,21;UBERON:0003528,8.05e-14,29;UBERON:0002791,8.05e-14,29;UBERON:0001893,8.05e-14,29;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002020,8.39e-12,34;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0003080,4.84e-10,40;UBERON:0000073,5.73e-10,54;UBERON:0002616,9.82e-09,46;UBERON:0000955,1.51e-08,47;UBERON:0006238,1.51e-08,47;UBERON:0003056,3.37e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0001017,2.40e-07,73;UBERON:0001016,3.81e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,1.14918604276669,0.614426133024974,0,0,0,0,0,0.916789486660861,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0.521472960576829,1.27857728665165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.06357760157895,5.72895513439397,3.95262319390481,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.38581844092741,0,0,0,0,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@Myo5b | |||
}} |
Latest revision as of 17:27, 1 October 2015
Short description: | p18@Myo5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Myo5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:328 |
Association with transcript: | -14bp_to_ENSMUST00000122914_5end |
EntrezGene: | Myo5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.23e-27 | 10 |
visual cortex | 1.23e-27 | 10 |
neocortex | 1.23e-27 | 10 |
regional part of cerebral cortex | 1.88e-23 | 17 |
cerebral cortex | 5.01e-19 | 21 |
cerebral hemisphere | 5.01e-19 | 21 |
pallium | 5.01e-19 | 21 |
brain grey matter | 8.05e-14 | 29 |
regional part of telencephalon | 8.05e-14 | 29 |
telencephalon | 8.05e-14 | 29 |
cortex | 5.53e-12 | 1 |
zygote cortex | 5.53e-12 | 1 |
gray matter | 8.39e-12 | 34 |
regional part of forebrain | 2.68e-10 | 39 |
forebrain | 2.68e-10 | 39 |
future forebrain | 2.68e-10 | 39 |
anterior neural tube | 4.84e-10 | 40 |
regional part of nervous system | 5.73e-10 | 54 |
regional part of brain | 9.82e-09 | 46 |
brain | 1.51e-08 | 47 |
future brain | 1.51e-08 | 47 |
pre-chordal neural plate | 3.37e-08 | 49 |
neural tube | 1.00e-07 | 52 |
neural rod | 1.00e-07 | 52 |
future spinal cord | 1.00e-07 | 52 |
neural keel | 1.00e-07 | 52 |
central nervous system | 2.40e-07 | 73 |
nervous system | 3.81e-07 | 75 |