FFCP PHASE1:Mm9::chr16:23225375..23225389,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:23225375..23225389,- to FFCP PHASE1:Mm9::chr16:23225375..23225389,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2173 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C9L1 | |UniProt=Q8C9L1 | ||
|association_with_transcript=13bp_to_uc007ytn.1_5end | |||
|cluster_id=chr16:23225375..23225389,- | |||
|description=CAGE_peak_1_at_uc007ytn.1_5end | |||
|id=chr16:23225375..23225389,- | |||
|ontology_enrichment_celltype=CL:0000107!1.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.45e-17,9;CL:0000791,5.01e-11,9;CL:0000789,5.01e-11,9;CL:0002420,5.01e-11,9;CL:0002419,5.01e-11,9;CL:0000790,5.01e-11,9;CL:0000624,2.84e-09,8;CL:0000084,9.10e-09,11;CL:0000827,9.10e-09,11;CL:0000838,6.38e-08,12;CL:0002031,2.37e-07,25;CL:0000542,3.30e-07,13;CL:0000051,3.30e-07,13;CL:0000219,3.69e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.37e-08!11;UBERON:0002048!9.16e-08!14;UBERON:0000117!9.16e-08!14;UBERON:0000171!9.16e-08!14;UBERON:0000170!9.16e-08!14;UBERON:0005597!9.16e-08!14;UBERON:0000118!9.16e-08!14;UBERON:0005157!1.29e-07!27;UBERON:0002410!1.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.17e-20,11;UBERON:0002410,1.45e-17,9;UBERON:0005157,1.15e-16,20;UBERON:0002048,3.33e-15,14;UBERON:0000117,3.33e-15,14;UBERON:0000171,3.33e-15,14;UBERON:0000170,3.33e-15,14;UBERON:0005597,3.33e-15,14;UBERON:0000118,3.33e-15,14;UBERON:0005153,4.85e-12,17;UBERON:0005178,4.85e-12,17;UBERON:0005181,4.85e-12,17;UBERON:0002224,4.85e-12,17;UBERON:0000915,4.85e-12,17;UBERON:0008947,4.85e-12,17;UBERON:0003258,4.85e-12,17;UBERON:0001004,8.08e-11,42;UBERON:0000065,6.23e-10,41;UBERON:0000011,3.83e-07,3;UBERON:0010313,8.17e-07,3;UBERON:0002342,8.17e-07,3;UBERON:0002005,8.17e-07,3;UBERON:0005428,8.17e-07,3;UBERON:0005062,8.17e-07,3;UBERON:0000013,8.91e-07,3;UBERON:0000310,9.97e-07,6;UBERON:0001443,9.97e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,11.3628524628587,2.81577444303333,3.7450324211519,0.34243593645101,0.558405112967355,9.75844160607873,10.4030278878607,0.666219523631325,1.01237633694913,0,2.05050407482854,2.74228867211478,1.27316895539409,0.255129870453209,0.695036658406197,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.439372365468944,0.777719596297134,1.53985063787899,1.43752564364972,0.335565212115473,7.97898356212479,6.38578218370682,0.514518872071894,0,0,0,0,0.633831403506179,1.35537812827653,1.77858959222228,0,0,0,0,0,0.622137673850866,1.08004750665353,0.630974884054146,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.638436690425939,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,1.28734528666413,4.1564358058732,4.05810284182349,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.45673551887624,1.8125651855302,0.29688427812965,0.173485326766136,0.913396434936424,0,0.452167921657868,0.823120949949934,0.376999773989026,0.988779870937496,0.722996784599558,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.509196819251581,0.497627882440372,0.758168275301024,0,0.780722657776222,0.459804208866946,0.180062129805349,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.879755620819744,0,0,1.0447564995665,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.710234206755631,0.393528463494808,0.154267112887378,0.930135779001631,0,0.350296027101508,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0,0,0,0,0,0,0.639864751605702,0.696710015581316,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0.405720242777006,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,1.29327233116623,0.37898282354097,1.14075483509418,1.01847051465113,1.40814148973101,1.67506257441816,2.38043640886014,1.17080188714679,2.83743259391144,1.55025282754142,1.43509291791738,1.96635977658886,0.863424909329478,1.01254341007058,0,0,0,0.827810238914197,0.481651769963376,0.820481806145422,0,0,5.99465616890888,2.34263246577983,5.38558494331997,6.21318874676635,6.68396022247182,5.37845408498782,4.04810701674894,3.21481443702443,5.13874111330481,0.963963949265421,0.99358059645788,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,1.03135543248187,0,0.900305470156551,0.776152102696527,0.214337035031592,0.532020700926821,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0.291480836629851,0.370850604021019,0.683483523191411,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0.915112692826091,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0.627264888043406,0.218362563746178,0.404593039154462,0.578574190077352,0,0.259229946583586,1.24267862617385,0,0.747582730219894,1.48912641411388,0.388902376688095,0.645799117388655,0.844780627453891,0.58678619322877,0.781226309063701,0.734015410979976,0.483168241652012,0,2.52808896502543,0.202725215290164,0.102710957164827,0,0.179026695667481,0.596044064343795,0.480781798079875,0.886137163047463,0.302899349844443,0.304827226619999,0.604957110821043,0.877120926657772,0.962118416403295,1.28564592399726,0,0,0.0897138566094757,0,0,0,0.915758121336325,0.214368379079066,0,1.12950368523413,0,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0.518936737920883,0,0.341467211508268,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.206035057238894,0.962757628775446,0.252697211763798,1.01391719956096,0.377252682772152,0.187283014939765,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0.492522411877817,0,0.464810523557898,0,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,11.3628524628587,2.81577444303333,3.7450324211519,0.34243593645101,0.558405112967355,9.75844160607873,10.4030278878607,0.666219523631325,1.01237633694913,0,2.05050407482854,2.74228867211478,1.27316895539409,0.255129870453209,0.695036658406197,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.439372365468944,0.777719596297134,1.53985063787899,1.43752564364972,0.335565212115473,7.97898356212479,6.38578218370682,0.514518872071894,0,0,0,0,0.633831403506179,1.35537812827653,1.77858959222228,0,0,0,0,0,0.622137673850866,1.08004750665353,0.630974884054146,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.638436690425939,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,1.28734528666413,4.1564358058732,4.05810284182349,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.45673551887624,1.8125651855302,0.29688427812965,0.173485326766136,0.913396434936424,0,0.452167921657868,0.823120949949934,0.376999773989026,0.988779870937496,0.722996784599558,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0.149790639404823,0,0.251308704225729,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.509196819251581,0.497627882440372,0.758168275301024,0,0.780722657776222,0.459804208866946,0.180062129805349,0.60281927134286,0.408218994907967,0.384341160854549,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.879755620819744,0,0,1.0447564995665,0.61734640922383,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.710234206755631,0.393528463494808,0.154267112887378,0.930135779001631,0,0.350296027101508,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0,0,0,0,0,0,0.639864751605702,0.696710015581316,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0.405720242777006,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,1.29327233116623,0.37898282354097,1.14075483509418,1.01847051465113,1.40814148973101,1.67506257441816,2.38043640886014,1.17080188714679,2.83743259391144,1.55025282754142,1.43509291791738,1.96635977658886,0.863424909329478,1.01254341007058,0,0,0,0.827810238914197,0.481651769963376,0.820481806145422,0,0,5.99465616890888,2.34263246577983,5.38558494331997,6.21318874676635,6.68396022247182,5.37845408498782,4.04810701674894,3.21481443702443,5.13874111330481,0.963963949265421,0.99358059645788,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,1.03135543248187,0,0.900305470156551,0.776152102696527,0.214337035031592,0.532020700926821,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0.291480836629851,0.370850604021019,0.683483523191411,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0.915112692826091,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0.627264888043406,0.218362563746178,0.404593039154462,0.578574190077352,0,0.259229946583586,1.24267862617385,0,0.747582730219894,1.48912641411388,0.388902376688095,0.645799117388655,0.844780627453891,0.58678619322877,0.781226309063701,0.734015410979976,0.483168241652012,0,2.52808896502543,0.202725215290164,0.102710957164827,0,0.179026695667481,0.596044064343795,0.480781798079875,0.886137163047463,0.302899349844443,0.304827226619999,0.604957110821043,0.877120926657772,0.962118416403295,1.28564592399726,0,0,0.0897138566094757,0,0,0,0.915758121336325,0.214368379079066,0,1.12950368523413,0,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0.518936737920883,0,0.341467211508268,0.486213434136588,0.838452650511929,0.551530525350042,0.44449345560323,0.206035057238894,0.962757628775446,0.252697211763798,1.01391719956096,0.377252682772152,0.187283014939765,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0.492522411877817,0,0.464810523557898,0,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p1@uc007ytn.1 | |||
}} | }} |
Latest revision as of 19:27, 1 October 2015
Short description: | p1@uc007ytn.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007ytn.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2173 |
Association with transcript: | 13bp_to_uc007ytn.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.45e-17 | 9 |
mature alpha-beta T cell | 5.01e-11 | 9 |
alpha-beta T cell | 5.01e-11 | 9 |
immature T cell | 5.01e-11 | 9 |
mature T cell | 5.01e-11 | 9 |
immature alpha-beta T cell | 5.01e-11 | 9 |
CD4-positive, alpha-beta T cell | 2.84e-09 | 8 |
T cell | 9.10e-09 | 11 |
pro-T cell | 9.10e-09 | 11 |
lymphoid lineage restricted progenitor cell | 6.38e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 2.37e-07 | 25 |
lymphocyte | 3.30e-07 | 13 |
common lymphoid progenitor | 3.30e-07 | 13 |
motile cell | 3.69e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.17e-20 | 11 |
autonomic nervous system | 1.45e-17 | 9 |
epithelial fold | 1.15e-16 | 20 |
lung | 3.33e-15 | 14 |
respiratory tube | 3.33e-15 | 14 |
respiration organ | 3.33e-15 | 14 |
pair of lungs | 3.33e-15 | 14 |
lung primordium | 3.33e-15 | 14 |
lung bud | 3.33e-15 | 14 |
epithelial bud | 4.85e-12 | 17 |
thoracic cavity element | 4.85e-12 | 17 |
thoracic segment organ | 4.85e-12 | 17 |
thoracic cavity | 4.85e-12 | 17 |
thoracic segment of trunk | 4.85e-12 | 17 |
respiratory primordium | 4.85e-12 | 17 |
endoderm of foregut | 4.85e-12 | 17 |
respiratory system | 8.08e-11 | 42 |
respiratory tract | 6.23e-10 | 41 |
parasympathetic nervous system | 3.83e-07 | 3 |
neural crest-derived structure | 8.17e-07 | 3 |
neural crest | 8.17e-07 | 3 |
enteric nervous system | 8.17e-07 | 3 |
vagal neural crest | 8.17e-07 | 3 |
neural fold | 8.17e-07 | 3 |
sympathetic nervous system | 8.91e-07 | 3 |
breast | 9.97e-07 | 6 |
chest | 9.97e-07 | 6 |