FFCP PHASE1:Mm9::chr5:124801276..124801295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13445 | |EntrezGene=13445 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F2Z4B3 | |UniProt=F2Z4B3 | ||
|association_with_transcript=367bp_to_ENSMUST00000111474_5end | |association_with_transcript=367bp_to_ENSMUST00000111474_5end | ||
|cluster_id=chr5:124801276..124801295,- | |||
|description=CAGE_peak_6_at_Cdk2ap1_5end | |description=CAGE_peak_6_at_Cdk2ap1_5end | ||
|id=chr5:124801276..124801295,- | |id=chr5:124801276..124801295,- | ||
|ontology_enrichment_celltype=CL:0000221!2.01e-17!44;CL:0000133!2.01e-17!44;CL:0002319!5.33e-17!43;CL:0000540!9.89e-15!33;CL:0000047!9.89e-15!33;CL:0000031!9.89e-15!33;CL:0000404!9.89e-15!33;CL:0000055!1.21e-14!50;CL:0000393!6.70e-13!39;CL:0000211!6.70e-13!39;CL:0000117!2.68e-09!23;CL:0000337!2.68e-09!23;CL:0002321!5.26e-07!70;CL:0000220!5.26e-07!70 | |ontology_enrichment_celltype=CL:0000221!2.01e-17!44;CL:0000133!2.01e-17!44;CL:0002319!5.33e-17!43;CL:0000540!9.89e-15!33;CL:0000047!9.89e-15!33;CL:0000031!9.89e-15!33;CL:0000404!9.89e-15!33;CL:0000055!1.21e-14!50;CL:0000393!6.70e-13!39;CL:0000211!6.70e-13!39;CL:0000117!2.68e-09!23;CL:0000337!2.68e-09!23;CL:0002321!5.26e-07!70;CL:0000220!5.26e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.46e-25,43;CL:0000221,1.86e-24,44;CL:0000133,1.86e-24,44;CL:0000540,1.14e-21,33;CL:0000047,1.14e-21,33;CL:0000031,1.14e-21,33;CL:0000404,1.14e-21,33;CL:0000393,3.46e-19,39;CL:0000211,3.46e-19,39;CL:0002321,5.48e-14,70;CL:0000117,8.59e-12,23;CL:0000337,8.59e-12,23;CL:0000107,2.26e-10,9;CL:0000120,2.57e-07,3;CL:0002613,2.82e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.58e-28!102;UBERON:0000924!2.58e-28!102;UBERON:0006601!2.58e-28!102;UBERON:0001017!1.14e-22!73;UBERON:0005743!1.14e-22!73;UBERON:0000073!2.46e-22!75;UBERON:0001016!2.46e-22!75;UBERON:0002346!1.01e-21!71;UBERON:0003075!1.01e-21!71;UBERON:0007284!1.01e-21!71;UBERON:0000033!2.55e-13!63;UBERON:0001049!3.93e-13!52;UBERON:0005068!3.93e-13!52;UBERON:0006241!3.93e-13!52;UBERON:0007135!3.93e-13!52;UBERON:0003056!6.75e-11!49;UBERON:0000955!1.11e-09!50;UBERON:0006238!1.11e-09!50;UBERON:0002616!2.29e-09!49;UBERON:0003080!9.21e-09!40;UBERON:0002780!1.78e-08!39;UBERON:0001890!1.78e-08!39;UBERON:0006240!1.78e-08!39;UBERON:0002020!2.18e-08!34;UBERON:0002342!1.47e-07!10;UBERON:0005062!1.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-23,73;UBERON:0001016,8.62e-23,75;UBERON:0004121,1.64e-21,95;UBERON:0000924,1.64e-21,95;UBERON:0006601,1.64e-21,95;UBERON:0010314,5.38e-15,92;UBERON:0002346,6.96e-14,64;UBERON:0003075,6.96e-14,64;UBERON:0007284,6.96e-14,64;UBERON:0010371,1.92e-12,73;UBERON:0002410,2.26e-10,9;UBERON:0001049,6.26e-10,52;UBERON:0005068,6.26e-10,52;UBERON:0006241,6.26e-10,52;UBERON:0007135,6.26e-10,52;UBERON:0000010,2.88e-08,11;UBERON:0000073,3.09e-08,54;UBERON:0002240,5.03e-08,6;UBERON:0005174,5.03e-08,6;UBERON:0001137,5.03e-08,6;UBERON:0002369,2.74e-07,7;UBERON:0006858,2.74e-07,7;UBERON:0000013,3.10e-07,3;UBERON:0003056,3.59e-07,49;UBERON:0002020,8.75e-07,34 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,1.52617609466313,1.97717564461025,0.58328969722285,0.419959264876088,1.43752564364972,0,0,0,1.02903774414379,0,0,2.02316460859598,6.34789175126439,4.43681982454325,0,0.889294796111139,0,0.988866362566974,0,2.39680088414724,4.2264013585371,0.725827286159344,1.21505344498522,0.420649922702764,3.14216082844184,1.54607978666129,0.979926393719632,0.670918297127655,0,0,0.255374676170375,0.153606533256243,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.12552522006336,0.763991238884051,0.883885756421003,1.42371680799103,2.23679334990361,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0.867426633830679,3.04465478312141,3.68984795609694,3.61734337326294,0.940709657085638,3.26733137457156,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.973447578406546,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0.919608417733892,1.44049703844279,0.60281927134286,0.884474488967262,1.7935920839879,1.3118241438362,0.258703370739016,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.32833492815819,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.937693492737625,0,0,1.57754109708128,2.34263246577983,2.15423397732799,0.238968797952552,1.78238939265915,0.849229592366497,4.45291771842384,2.63030272120181,2.37172666767914,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.943025398779491,1.47650946440386,1.53717573971964,0,0.727067458955011,1.42598951353889,0,1.05418608574999,0,6.12791290356818,0.36012218806262,0.258717367565509,0,1.06404140185364,1.24858172321449,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0,0,0,0,0.328281799490123,0,2.22510362412612,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,0.418176592028937,0,0.539457385539283,0.495920734352016,0.26175594198403,0,1.86401793926078,0,0,0.496375471371293,0.194451188344048,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0,2.2661816921691,2.02506750069542,0.45032120322422,0.906284817968409,0,0.415149390336707,0.798049746802062,0.682934423016537,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.287177344778066,0.952587382566147,0.927074607558844,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.382576664137687,0.661774257358546,0.695603506861264 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|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,1.52617609466313,1.97717564461025,0.58328969722285,0.419959264876088,1.43752564364972,0,0,0,1.02903774414379,0,0,2.02316460859598,6.34789175126439,4.43681982454325,0,0.889294796111139,0,0.988866362566974,0,2.39680088414724,4.2264013585371,0.725827286159344,1.21505344498522,0.420649922702764,3.14216082844184,1.54607978666129,0.979926393719632,0.670918297127655,0,0,0.255374676170375,0.153606533256243,3.42904348098504,2.56165402086747,3.64639359389732,1.11673199600552,1.12552522006336,0.763991238884051,0.883885756421003,1.42371680799103,2.23679334990361,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,0.867426633830679,3.04465478312141,3.68984795609694,3.61734337326294,0.940709657085638,3.26733137457156,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.599162557619291,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.973447578406546,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0.919608417733892,1.44049703844279,0.60281927134286,0.884474488967262,1.7935920839879,1.3118241438362,0.258703370739016,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.32833492815819,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.494096864172033,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.937693492737625,0,0,1.57754109708128,2.34263246577983,2.15423397732799,0.238968797952552,1.78238939265915,0.849229592366497,4.45291771842384,2.63030272120181,2.37172666767914,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.943025398779491,1.47650946440386,1.53717573971964,0,0.727067458955011,1.42598951353889,0,1.05418608574999,0,6.12791290356818,0.36012218806262,0.258717367565509,0,1.06404140185364,1.24858172321449,1.81003922662333,1.8267896946876,0.23467170806371,0,0.220528398054962,0,0,0,0,0.328281799490123,0,2.22510362412612,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,0.418176592028937,0,0.539457385539283,0.495920734352016,0.26175594198403,0,1.86401793926078,0,0,0.496375471371293,0.194451188344048,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0,2.2661816921691,2.02506750069542,0.45032120322422,0.906284817968409,0,0.415149390336707,0.798049746802062,0.682934423016537,0.486213434136588,0.838452650511929,0.183843508450014,0.44449345560323,0,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.287177344778066,0.952587382566147,0.927074607558844,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.145346416632329,0.470546902076653,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.382576664137687,0.661774257358546,0.695603506861264 | ||
|short_description=p6@Cdk2ap1 | |short_description=p6@Cdk2ap1 | ||
}} | }} |
Latest revision as of 21:37, 1 October 2015
Short description: | p6@Cdk2ap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cdk2ap1_5end |
Coexpression cluster: | NA |
Association with transcript: | 367bp_to_ENSMUST00000111474_5end |
EntrezGene: | Cdk2ap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.46e-25 | 43 |
ectodermal cell | 1.86e-24 | 44 |
neurectodermal cell | 1.86e-24 | 44 |
neuron | 1.14e-21 | 33 |
neuronal stem cell | 1.14e-21 | 33 |
neuroblast | 1.14e-21 | 33 |
electrically signaling cell | 1.14e-21 | 33 |
electrically responsive cell | 3.46e-19 | 39 |
electrically active cell | 3.46e-19 | 39 |
embryonic cell | 5.48e-14 | 70 |
CNS neuron (sensu Vertebrata) | 8.59e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.59e-12 | 23 |
autonomic neuron | 2.26e-10 | 9 |
granule cell | 2.57e-07 | 3 |
striatum neuron | 2.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.20e-23 | 73 |
nervous system | 8.62e-23 | 75 |
ectoderm-derived structure | 1.64e-21 | 95 |
ectoderm | 1.64e-21 | 95 |
presumptive ectoderm | 1.64e-21 | 95 |
structure with developmental contribution from neural crest | 5.38e-15 | 92 |
neurectoderm | 6.96e-14 | 64 |
neural plate | 6.96e-14 | 64 |
presumptive neural plate | 6.96e-14 | 64 |
ecto-epithelium | 1.92e-12 | 73 |
autonomic nervous system | 2.26e-10 | 9 |
neural tube | 6.26e-10 | 52 |
neural rod | 6.26e-10 | 52 |
future spinal cord | 6.26e-10 | 52 |
neural keel | 6.26e-10 | 52 |
peripheral nervous system | 2.88e-08 | 11 |
regional part of nervous system | 3.09e-08 | 54 |
spinal cord | 5.03e-08 | 6 |
dorsal region element | 5.03e-08 | 6 |
dorsum | 5.03e-08 | 6 |
adrenal gland | 2.74e-07 | 7 |
adrenal/interrenal gland | 2.74e-07 | 7 |
sympathetic nervous system | 3.10e-07 | 3 |
pre-chordal neural plate | 3.59e-07 | 49 |
gray matter | 8.75e-07 | 34 |