FFCP PHASE1:Mm9::chr16:32877809..32877828,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:32877809..32877828,- to FFCP PHASE1:Mm9::chr16:32877809..32877828,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100502698 | |EntrezGene=100502698 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z7B1,Q80U62 | |UniProt=D3Z7B1,Q80U62 | ||
|association_with_transcript=23bp_to_ENSMUST00000119810,ENSMUST00000171595,uc007yzn.1_5end | |||
|cluster_id=chr16:32877809..32877828,- | |||
|description=CAGE_peak_6_at_1700021K19Rik_5end | |||
|id=chr16:32877809..32877828,- | |||
|ontology_enrichment_celltype=CL:0000540!3.29e-09!33;CL:0000047!3.29e-09!33;CL:0000031!3.29e-09!33;CL:0000404!3.29e-09!33;CL:0000117!8.48e-08!23;CL:0000337!8.48e-08!23;CL:0002319!9.45e-08!43;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39;CL:0000221!2.39e-07!44;CL:0000133!2.39e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.78e-10,33;CL:0000047,7.78e-10,33;CL:0000031,7.78e-10,33;CL:0000404,7.78e-10,33;CL:0000117,4.34e-09,23;CL:0000337,4.34e-09,23;CL:0000393,4.93e-08,39;CL:0000211,4.93e-08,39;CL:0002319,8.57e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.73e-11!73;UBERON:0005743!2.73e-11!73;UBERON:0000073!6.31e-11!75;UBERON:0001016!6.31e-11!75;UBERON:0004121!2.21e-10!102;UBERON:0000924!2.21e-10!102;UBERON:0006601!2.21e-10!102;UBERON:0002346!1.88e-08!71;UBERON:0003075!1.88e-08!71;UBERON:0007284!1.88e-08!71;UBERON:0001049!3.90e-08!52;UBERON:0005068!3.90e-08!52;UBERON:0006241!3.90e-08!52;UBERON:0007135!3.90e-08!52;UBERON:0000468!7.24e-08!333;UBERON:0003133!1.28e-07!24;UBERON:0000955!3.95e-07!50;UBERON:0006238!3.95e-07!50;UBERON:0005156!4.07e-07!26;UBERON:0000990!4.07e-07!26;UBERON:0002616!9.56e-07!49;UBERON:0000991!9.61e-07!18;UBERON:0005564!9.61e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.75e-10,73;UBERON:0001016,2.66e-09,75;UBERON:0000991,1.63e-08,18;UBERON:0005564,1.63e-08,18;UBERON:0003133,2.12e-08,24;UBERON:0000073,4.57e-08,54;UBERON:0004176,5.35e-08,17;UBERON:0009196,5.35e-08,17;UBERON:0009117,5.35e-08,17;UBERON:0003135,5.92e-08,15;UBERON:0004121,8.04e-08,95;UBERON:0000924,8.04e-08,95;UBERON:0006601,8.04e-08,95;UBERON:0002020,1.01e-07,34;UBERON:0000473,1.56e-07,14;UBERON:0005156,2.53e-07,26;UBERON:0000990,2.53e-07,26;UBERON:0002346,2.83e-07,64;UBERON:0003075,2.83e-07,64;UBERON:0007284,2.83e-07,64;UBERON:0003101,3.29e-07,16;UBERON:0000079,3.29e-07,16;UBERON:0001049,4.64e-07,52;UBERON:0005068,4.64e-07,52;UBERON:0006241,4.64e-07,52;UBERON:0007135,4.64e-07,52 | |||
|phase1_expression=0.640595388419176,0,0,0.30246421130683,1.00179145989269,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,1.23402990245165,0.42438965179803,3.82694805679814,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.881277725829041,0.912392380975631,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.419959264876088,0,0.503347818173209,0,0,0,1.43266719969378,0,1.41621522601718,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,0.898800331555214,3.45796474789399,1.34796496001021,1.21505344498522,1.05162480675691,2.85650984403804,2.87129103237098,1.46988959057945,1.43768206527355,0.919218786610021,2.20231761998777,1.40456071893706,1.53606533256243,1.31886287730194,0.823388792421687,1.04182674111352,1.11673199600552,1.68828783009504,1.06958773443767,1.76777151284201,1.56608848879013,2.05039390407831,0.075726193333184,0.982430281388212,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.561777680527007,0.170430322578058,0,0.70667914902068,0.281686839553361,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,0,0.34255163915718,0.517875767294343,1.48442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.904335843315735,0.823120949949934,0.251333182659351,1.73036477414062,0.433798070759735,0.884610551949874,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.898743836428936,0.457500602818626,1.50785222535437,1.39059456153821,1.53429274398198,1.45451631191692,0.811206315338788,1.52759045775474,0.497627882440372,1.26361379216837,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,1.50704817835715,1.02054748726992,1.0249097622788,0.843315521037559,1.03481348295606,0.215567992932842,1.13463648100692,0.879755620819744,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,1.39323986772945,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.36012412292203,0.473489471170421,0.983821158737019,0.771335564436891,1.16266972375204,1.07309360559848,0.817357396570186,0.822799249567402,0.656669856316381,0.729619285912702,0.292399974850665,0,0.134206418760372,1.05144974282064,0.823236899034275,0.330418782983798,0,0.426576501070468,0.464473343720877,0.77320476793256,1.21010114774006,0.444756087689741,0.380451252225118,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0.189667900953082,1.02823661348756,1.1270773567308,0.814605311381257,0.775809948670503,0.631222379012867,1.45444035385792,0.442830443938806,0.31399745568275,0.493588655687202,0.592905254174298,0.166845105716094,0.982794975566015,0.224862112384854,0.811440485554012,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,1.10851914099963,0,1.62964976442026,0.678980343100753,1.40814148973101,0.502518772325447,0.238043640886014,0.390267295715598,1.10344600874334,0.8858587585951,1.11618338060241,0.655453258862952,0.518054945597687,0.144649058581512,1.50791283939272,2.71952841909355,0.491764273019036,0.827810238914197,2.56880943980467,1.05490517932983,0.327869890753351,0,0.315508219416257,2.34263246577983,1.07711698866399,0.955875191810208,2.67358408898873,1.41538265394416,1.21443210502468,0.876767573733936,1.18586333383957,1.60660658210904,1.56134093729095,1.42452482933804,0.81443479676788,0.989820737835213,0,0.485561272309963,1.209294227859,0.943025398779491,0.885905678642318,0,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,0,0,3.06395645178409,0.36012218806262,0.776152102696527,1.50035924522115,0.354680467284547,1.07021290561242,0.822745103010605,0.913394847343798,0.938686832254841,3.81297727554876,0.220528398054962,0.98931751764888,1.45317984026315,0.844380948994182,0.358117032009409,0.820704498725306,0.291480836629851,1.48340241608408,0.341741761595705,0.82554747185289,0.555583582109135,0.188368457004691,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0.474503990371703,0.609958401380546,0.540026704109006,0.627264888043406,1.31017538247707,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,23.675103424736,1.19613236835183,1.48912641411388,1.16670713006429,1.80823752868824,1.18269287843545,1.29092962510329,1.5624526181274,1.67774951081137,13.0455425246043,14.977560325409,0,0.608175645870493,0.821687657318618,0.51968329191118,0,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.762068066549998,0.604957110821043,0.194915761479505,0.192423683280659,0.350630706544707,0,0.443971906748129,0.358855426437903,0,0.772758376128762,0.750729901804728,1.46521299413812,0.643105137237198,0.501572104035363,0,0,2.29158205375759,0.515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| |phase1_expression=0.640595388419176,0,0,0.30246421130683,1.00179145989269,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,1.23402990245165,0.42438965179803,3.82694805679814,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.881277725829041,0.912392380975631,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.419959264876088,0,0.503347818173209,0,0,0,1.43266719969378,0,1.41621522601718,0.528990979272033,0.633831403506179,0.338844532069132,0.889294796111139,1.3498495759221,2.96659908770092,0.7104801149461,0.898800331555214,3.45796474789399,1.34796496001021,1.21505344498522,1.05162480675691,2.85650984403804,2.87129103237098,1.46988959057945,1.43768206527355,0.919218786610021,2.20231761998777,1.40456071893706,1.53606533256243,1.31886287730194,0.823388792421687,1.04182674111352,1.11673199600552,1.68828783009504,1.06958773443767,1.76777151284201,1.56608848879013,2.05039390407831,0.075726193333184,0.982430281388212,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.561777680527007,0.170430322578058,0,0.70667914902068,0.281686839553361,1.28326477414318,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,0,0.34255163915718,0.517875767294343,1.48442139064825,1.04091196059682,0.304465478312141,0.461230994512117,0.904335843315735,0.823120949949934,0.251333182659351,1.73036477414062,0.433798070759735,0.884610551949874,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.898743836428936,0.457500602818626,1.50785222535437,1.39059456153821,1.53429274398198,1.45451631191692,0.811206315338788,1.52759045775474,0.497627882440372,1.26361379216837,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,1.50704817835715,1.02054748726992,1.0249097622788,0.843315521037559,1.03481348295606,0.215567992932842,1.13463648100692,0.879755620819744,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,1.39323986772945,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.36012412292203,0.473489471170421,0.983821158737019,0.771335564436891,1.16266972375204,1.07309360559848,0.817357396570186,0.822799249567402,0.656669856316381,0.729619285912702,0.292399974850665,0,0.134206418760372,1.05144974282064,0.823236899034275,0.330418782983798,0,0.426576501070468,0.464473343720877,0.77320476793256,1.21010114774006,0.444756087689741,0.380451252225118,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0.189667900953082,1.02823661348756,1.1270773567308,0.814605311381257,0.775809948670503,0.631222379012867,1.45444035385792,0.442830443938806,0.31399745568275,0.493588655687202,0.592905254174298,0.166845105716094,0.982794975566015,0.224862112384854,0.811440485554012,0.241177159752417,0.25462585178142,0.863088412352432,0.486405680325106,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,1.10851914099963,0,1.62964976442026,0.678980343100753,1.40814148973101,0.502518772325447,0.238043640886014,0.390267295715598,1.10344600874334,0.8858587585951,1.11618338060241,0.655453258862952,0.518054945597687,0.144649058581512,1.50791283939272,2.71952841909355,0.491764273019036,0.827810238914197,2.56880943980467,1.05490517932983,0.327869890753351,0,0.315508219416257,2.34263246577983,1.07711698866399,0.955875191810208,2.67358408898873,1.41538265394416,1.21443210502468,0.876767573733936,1.18586333383957,1.60660658210904,1.56134093729095,1.42452482933804,0.81443479676788,0.989820737835213,0,0.485561272309963,1.209294227859,0.943025398779491,0.885905678642318,0,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,0,0,3.06395645178409,0.36012218806262,0.776152102696527,1.50035924522115,0.354680467284547,1.07021290561242,0.822745103010605,0.913394847343798,0.938686832254841,3.81297727554876,0.220528398054962,0.98931751764888,1.45317984026315,0.844380948994182,0.358117032009409,0.820704498725306,0.291480836629851,1.48340241608408,0.341741761595705,0.82554747185289,0.555583582109135,0.188368457004691,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0.474503990371703,0.609958401380546,0.540026704109006,0.627264888043406,1.31017538247707,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,23.675103424736,1.19613236835183,1.48912641411388,1.16670713006429,1.80823752868824,1.18269287843545,1.29092962510329,1.5624526181274,1.67774951081137,13.0455425246043,14.977560325409,0,0.608175645870493,0.821687657318618,0.51968329191118,0,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.762068066549998,0.604957110821043,0.194915761479505,0.192423683280659,0.350630706544707,0,0.443971906748129,0.358855426437903,0,0.772758376128762,0.750729901804728,1.46521299413812,0.643105137237198,0.501572104035363,0,0,2.29158205375759,0.515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| ||
|short_description=p6@1700021K19Rik | |||
}} | }} |
Latest revision as of 21:51, 1 October 2015
Short description: | p6@1700021K19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_1700021K19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 23bp_to_ENSMUST00000119810, ENSMUST00000171595, uc007yzn.1_5end |
EntrezGene: | 1700021K19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.78e-10 | 33 |
neuronal stem cell | 7.78e-10 | 33 |
neuroblast | 7.78e-10 | 33 |
electrically signaling cell | 7.78e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.34e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.34e-09 | 23 |
electrically responsive cell | 4.93e-08 | 39 |
electrically active cell | 4.93e-08 | 39 |
neural cell | 8.57e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.75e-10 | 73 |
nervous system | 2.66e-09 | 75 |
gonad | 1.63e-08 | 18 |
gonad primordium | 1.63e-08 | 18 |
reproductive organ | 2.12e-08 | 24 |
regional part of nervous system | 4.57e-08 | 54 |
external genitalia | 5.35e-08 | 17 |
indifferent external genitalia | 5.35e-08 | 17 |
indifferent gonad | 5.35e-08 | 17 |
male reproductive organ | 5.92e-08 | 15 |
ectoderm-derived structure | 8.04e-08 | 95 |
ectoderm | 8.04e-08 | 95 |
presumptive ectoderm | 8.04e-08 | 95 |
gray matter | 1.01e-07 | 34 |
testis | 1.56e-07 | 14 |
reproductive structure | 2.53e-07 | 26 |
reproductive system | 2.53e-07 | 26 |
neurectoderm | 2.83e-07 | 64 |
neural plate | 2.83e-07 | 64 |
presumptive neural plate | 2.83e-07 | 64 |
male organism | 3.29e-07 | 16 |
male reproductive system | 3.29e-07 | 16 |
neural tube | 4.64e-07 | 52 |
neural rod | 4.64e-07 | 52 |
future spinal cord | 4.64e-07 | 52 |
neural keel | 4.64e-07 | 52 |