FFCP PHASE1:Mm9::chrX:54453734..54453748,+: Difference between revisions
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{{FFCP|EntrezGene=100502842|HGNC=|MCL_coexpression_id=68|UniProt=|association_with_transcript=-65bp_to_NR_038463_5end|description=CAGE_peak_3_at_Gm14718_5end|id=chrX:54453734..54453748,+|ontology_enrichment_celltype=CL:0000624!3.47e-29!8;CL:0000893!8.20e-29!6;CL:0002489!8.20e-29!6;CL:0000898!8.20e-29!6;CL:0000809!8.20e-29!6;CL:0000810!8.20e-29!6;CL:0000895!8.20e-29!6;CL:0000808!8.20e-29!6;CL:0000894!8.20e-29!6;CL:0000806!8.20e-29!6;CL:0000807!8.20e-29!6;CL:0000805!8.20e-29!6;CL:0002425!8.20e-29!6;CL:0002436!8.20e-29!6;CL:0002427!8.20e-29!6;CL:0002428!8.20e-29!6;CL:0002429!8.20e-29!6;CL:0002433!8.20e-29!6;CL:0002431!8.20e-29!6;CL:0002432!8.20e-29!6;CL:0000791!7.14e-26!9;CL:0000789!7.14e-26!9;CL:0002420!7.14e-26!9;CL:0002419!7.14e-26!9;CL:0000790!7.14e-26!9;CL:0000084!4.76e-21!11;CL:0000827!4.76e-21!11;CL:0000838!3.08e-19!12;CL:0000542!1.05e-17!13;CL:0000051!1.05e-17!13;CL:0000738!2.28e-13!17;CL:0002087!2.28e-13!17;CL:0002031!2.24e-11!25;CL:0000988!1.15e-08!32;CL:0002032!1.15e-08!32;CL:0000037!1.15e-08!32;CL:0000566!1.15e-08!32;CL:0000837!1.15e-08!32|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.42e-44!23;UBERON:0000974!6.42e-44!23;UBERON:0004807!6.42e-44!23;UBERON:0005058!6.42e-44!23;UBERON:0003351!6.42e-44!23;UBERON:0009113!6.42e-44!23;UBERON:0003295!6.42e-44!23;UBERON:0009722!6.42e-44!23;UBERON:0005562!6.42e-44!23;UBERON:0007690!6.42e-44!23;UBERON:0006562!5.30e-42!24;UBERON:0003408!5.30e-42!24;UBERON:0001557!5.30e-42!24;UBERON:0001042!5.30e-42!24;UBERON:0008814!5.30e-42!24;UBERON:0009145!5.30e-42!24;UBERON:0000072!4.21e-37!27;UBERON:0004177!2.14e-34!29;UBERON:0000063!3.94e-28!35;UBERON:0002193!5.50e-26!48;UBERON:0002390!1.92e-24!45;UBERON:0003061!1.92e-24!45;UBERON:0000065!1.08e-23!41;UBERON:0001004!4.47e-23!42;UBERON:0005057!1.31e-18!51;UBERON:0003929!4.33e-17!55;UBERON:0002405!4.66e-17!70;UBERON:0002368!1.79e-15!60;UBERON:0002530!4.17e-14!65;UBERON:0000490!7.41e-14!66;UBERON:0005911!3.75e-13!69;UBERON:0003081!4.69e-13!88;UBERON:0000949!1.66e-12!72;UBERON:0000153!1.64e-10!94;UBERON:0007811!4.39e-10!86;UBERON:0000064!7.45e-10!99;UBERON:0001041!2.86e-09!92;UBERON:0000077!1.15e-08!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,0,4.78681655315667,3.5109678948299,8.04724450659873,4.62678522172951,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0.302478555410522,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Gm14718}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100502842 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_NR_038463_5end | |||
|cluster_id=chrX:54453734..54453748,+ | |||
|description=CAGE_peak_3_at_Gm14718_5end | |||
|id=chrX:54453734..54453748,+ | |||
|ontology_enrichment_celltype=CL:0000624!3.47e-29!8;CL:0000893!8.20e-29!6;CL:0002489!8.20e-29!6;CL:0000898!8.20e-29!6;CL:0000809!8.20e-29!6;CL:0000810!8.20e-29!6;CL:0000895!8.20e-29!6;CL:0000808!8.20e-29!6;CL:0000894!8.20e-29!6;CL:0000806!8.20e-29!6;CL:0000807!8.20e-29!6;CL:0000805!8.20e-29!6;CL:0002425!8.20e-29!6;CL:0002436!8.20e-29!6;CL:0002427!8.20e-29!6;CL:0002428!8.20e-29!6;CL:0002429!8.20e-29!6;CL:0002433!8.20e-29!6;CL:0002431!8.20e-29!6;CL:0002432!8.20e-29!6;CL:0000791!7.14e-26!9;CL:0000789!7.14e-26!9;CL:0002420!7.14e-26!9;CL:0002419!7.14e-26!9;CL:0000790!7.14e-26!9;CL:0000084!4.76e-21!11;CL:0000827!4.76e-21!11;CL:0000838!3.08e-19!12;CL:0000542!1.05e-17!13;CL:0000051!1.05e-17!13;CL:0000738!2.28e-13!17;CL:0002087!2.28e-13!17;CL:0002031!2.24e-11!25;CL:0000988!1.15e-08!32;CL:0002032!1.15e-08!32;CL:0000037!1.15e-08!32;CL:0000566!1.15e-08!32;CL:0000837!1.15e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.42e-44!23;UBERON:0000974!6.42e-44!23;UBERON:0004807!6.42e-44!23;UBERON:0005058!6.42e-44!23;UBERON:0003351!6.42e-44!23;UBERON:0009113!6.42e-44!23;UBERON:0003295!6.42e-44!23;UBERON:0009722!6.42e-44!23;UBERON:0005562!6.42e-44!23;UBERON:0007690!6.42e-44!23;UBERON:0006562!5.30e-42!24;UBERON:0003408!5.30e-42!24;UBERON:0001557!5.30e-42!24;UBERON:0001042!5.30e-42!24;UBERON:0008814!5.30e-42!24;UBERON:0009145!5.30e-42!24;UBERON:0000072!4.21e-37!27;UBERON:0004177!2.14e-34!29;UBERON:0000063!3.94e-28!35;UBERON:0002193!5.50e-26!48;UBERON:0002390!1.92e-24!45;UBERON:0003061!1.92e-24!45;UBERON:0000065!1.08e-23!41;UBERON:0001004!4.47e-23!42;UBERON:0005057!1.31e-18!51;UBERON:0003929!4.33e-17!55;UBERON:0002405!4.66e-17!70;UBERON:0002368!1.79e-15!60;UBERON:0002530!4.17e-14!65;UBERON:0000490!7.41e-14!66;UBERON:0005911!3.75e-13!69;UBERON:0003081!4.69e-13!88;UBERON:0000949!1.66e-12!72;UBERON:0000153!1.64e-10!94;UBERON:0007811!4.39e-10!86;UBERON:0000064!7.45e-10!99;UBERON:0001041!2.86e-09!92;UBERON:0000077!1.15e-08!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,4.78681655315667,3.5109678948299,8.04724450659873,4.62678522172951,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0.302478555410522,0.487289403698762,0.481059208201647,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Gm14718 | |||
}} |
Latest revision as of 22:07, 1 October 2015
Short description: | p3@Gm14718 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm14718_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | -65bp_to_NR_038463_5end |
EntrezGene: | Gm14718 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
connective tissue | 4.29e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |