FFCP PHASE1:Mm9::chr19:20567168..20567179,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320092 | |EntrezGene=320092 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=442 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_NR_015502,uc008gyk.1,uc008gyl.1,uc012bji.1_5end | |association_with_transcript=-25bp_to_NR_015502,uc008gyk.1,uc008gyl.1,uc012bji.1_5end | ||
|cluster_id=chr19:20567168..20567179,+ | |||
|description=CAGE_peak_5_at_E030003E18Rik_5end | |description=CAGE_peak_5_at_E030003E18Rik_5end | ||
|id=chr19:20567168..20567179,+ | |id=chr19:20567168..20567179,+ | ||
|ontology_enrichment_celltype=CL:0002494!1.46e-07!3;CL:0000737!1.46e-07!3;CL:0000746!1.46e-07!3;CL:0000513!1.46e-07!3;CL:0002610!2.45e-07!3 | |ontology_enrichment_celltype=CL:0002494!1.46e-07!3;CL:0000737!1.46e-07!3;CL:0000746!1.46e-07!3;CL:0000513!1.46e-07!3;CL:0002610!2.45e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.18e-44,3;CL:0000737,1.18e-44,3;CL:0000746,1.18e-44,3;CL:0000513,1.18e-44,3;CL:0000680,8.13e-23,6;CL:0000187,8.13e-23,6;CL:0000056,8.13e-23,6;CL:0002610,4.86e-20,3;CL:0000222,1.10e-19,7;CL:0000355,1.69e-15,9;CL:0000393,8.49e-10,39;CL:0000211,8.49e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!6.48e-10!49;UBERON:0000955!1.28e-09!50;UBERON:0006238!1.28e-09!50;UBERON:0000033!1.55e-09!63;UBERON:0001049!1.38e-08!52;UBERON:0005068!1.38e-08!52;UBERON:0006241!1.38e-08!52;UBERON:0007135!1.38e-08!52;UBERON:0002346!2.21e-08!71;UBERON:0003075!2.21e-08!71;UBERON:0007284!2.21e-08!71;UBERON:0004121!6.61e-08!102;UBERON:0000924!6.61e-08!102;UBERON:0006601!6.61e-08!102;UBERON:0002298!1.64e-07!6;UBERON:0001017!1.91e-07!73;UBERON:0005743!1.91e-07!73;UBERON:0004684!2.45e-07!3;UBERON:0002275!2.45e-07!3;UBERON:0000073!4.18e-07!75;UBERON:0001016!4.18e-07!75;UBERON:0003076!4.28e-07!12;UBERON:0003057!4.28e-07!12 | |ontology_enrichment_uberon=UBERON:0002616!6.48e-10!49;UBERON:0000955!1.28e-09!50;UBERON:0006238!1.28e-09!50;UBERON:0000033!1.55e-09!63;UBERON:0001049!1.38e-08!52;UBERON:0005068!1.38e-08!52;UBERON:0006241!1.38e-08!52;UBERON:0007135!1.38e-08!52;UBERON:0002346!2.21e-08!71;UBERON:0003075!2.21e-08!71;UBERON:0007284!2.21e-08!71;UBERON:0004121!6.61e-08!102;UBERON:0000924!6.61e-08!102;UBERON:0006601!6.61e-08!102;UBERON:0002298!1.64e-07!6;UBERON:0001017!1.91e-07!73;UBERON:0005743!1.91e-07!73;UBERON:0004684!2.45e-07!3;UBERON:0002275!2.45e-07!3;UBERON:0000073!4.18e-07!75;UBERON:0001016!4.18e-07!75;UBERON:0003076!4.28e-07!12;UBERON:0003057!4.28e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.86e-20,3;UBERON:0002275,4.86e-20,3;UBERON:0001134,1.69e-15,9;UBERON:0002036,1.69e-15,9;UBERON:0002385,1.69e-15,9;UBERON:0000486,1.69e-15,9;UBERON:0007503,1.69e-15,9;UBERON:0001015,1.69e-15,9;UBERON:0002329,1.69e-15,9;UBERON:0003082,1.69e-15,9;UBERON:0003059,1.69e-15,9;UBERON:0007282,1.69e-15,9;UBERON:0004290,1.69e-15,9;UBERON:0009618,1.69e-15,9;UBERON:0000383,4.97e-14,10;UBERON:0007524,7.94e-13,11;UBERON:0003077,7.94e-13,11;UBERON:0007285,7.94e-13,11;UBERON:0007100,4.05e-08,18;UBERON:0000948,4.05e-08,18;UBERON:0005498,4.05e-08,18;UBERON:0004140,4.05e-08,18;UBERON:0009881,4.05e-08,18;UBERON:0004141,4.05e-08,18;UBERON:0003084,4.05e-08,18;UBERON:0007005,4.05e-08,18;UBERON:0004139,4.05e-08,18;UBERON:0004291,4.05e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,4.88792928468299,10.601737277734,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.766124028511126,1.99688493233117,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.404593039154462,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,4.88792928468299,10.601737277734,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.766124028511126,1.99688493233117,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.404593039154462,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@E030003E18Rik | |short_description=p5@E030003E18Rik | ||
}} | }} |
Latest revision as of 23:27, 1 October 2015
Short description: | p5@E030003E18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_E030003E18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:442 |
Association with transcript: | -25bp_to_NR_015502, uc008gyk.1, uc008gyl.1, uc012bji.1_5end |
EntrezGene: | E030003E18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.18e-44 | 3 |
striated muscle cell | 1.18e-44 | 3 |
cardiac muscle cell | 1.18e-44 | 3 |
cardiac muscle myoblast | 1.18e-44 | 3 |
muscle precursor cell | 8.13e-23 | 6 |
muscle cell | 8.13e-23 | 6 |
myoblast | 8.13e-23 | 6 |
raphe nuclei neuron | 4.86e-20 | 3 |
mesodermal cell | 1.10e-19 | 7 |
multi-potent skeletal muscle stem cell | 1.69e-15 | 9 |
electrically responsive cell | 8.49e-10 | 39 |
electrically active cell | 8.49e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.86e-20 | 3 |
reticular formation | 4.86e-20 | 3 |
skeletal muscle tissue | 1.69e-15 | 9 |
striated muscle tissue | 1.69e-15 | 9 |
muscle tissue | 1.69e-15 | 9 |
multilaminar epithelium | 1.69e-15 | 9 |
epithelial vesicle | 1.69e-15 | 9 |
musculature | 1.69e-15 | 9 |
somite | 1.69e-15 | 9 |
myotome | 1.69e-15 | 9 |
presomitic mesoderm | 1.69e-15 | 9 |
presumptive segmental plate | 1.69e-15 | 9 |
dermomyotome | 1.69e-15 | 9 |
trunk paraxial mesoderm | 1.69e-15 | 9 |
musculature of body | 4.97e-14 | 10 |
dense mesenchyme tissue | 7.94e-13 | 11 |
paraxial mesoderm | 7.94e-13 | 11 |
presumptive paraxial mesoderm | 7.94e-13 | 11 |
primary circulatory organ | 4.05e-08 | 18 |
heart | 4.05e-08 | 18 |
primitive heart tube | 4.05e-08 | 18 |
primary heart field | 4.05e-08 | 18 |
anterior lateral plate mesoderm | 4.05e-08 | 18 |
heart tube | 4.05e-08 | 18 |
heart primordium | 4.05e-08 | 18 |
cardiac mesoderm | 4.05e-08 | 18 |
cardiogenic plate | 4.05e-08 | 18 |
heart rudiment | 4.05e-08 | 18 |