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FFCP PHASE1:Mm9::chr16:38800306..38800322,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:38800306..38800322,-
|DHSsupport=NA
|short_description=p1@Upk1b
|DPIdataset=NA
|description=CAGE_peak_1_at_Upk1b_5end
|association_with_transcript=0bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end
|EntrezGene=22268
|EntrezGene=22268
|HGNC=
|HGNC=
|MCL_coexpression_id=95
|TSSclassifier=NA
|UniProt=Q9Z2C6
|UniProt=Q9Z2C6
|association_with_transcript=0bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end
|cluster_id=chr16:38800306..38800322,-
|description=CAGE_peak_1_at_Upk1b_5end
|id=chr16:38800306..38800322,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!2.98e-14!57;UBERON:0000466!1.44e-10!79;UBERON:0005177!2.97e-10!85;UBERON:0005178!6.82e-10!17;UBERON:0005181!6.82e-10!17;UBERON:0002224!6.82e-10!17;UBERON:0000915!6.82e-10!17;UBERON:0008947!6.82e-10!17;UBERON:0003258!6.82e-10!17;UBERON:0000926!2.76e-09!193;UBERON:0004120!2.76e-09!193;UBERON:0006603!2.76e-09!193;UBERON:0002100!9.79e-09!98;UBERON:0001048!1.17e-08!147;UBERON:0009569!1.25e-08!66;UBERON:0003103!2.56e-08!43;UBERON:0002048!7.28e-08!14;UBERON:0000117!7.28e-08!14;UBERON:0000171!7.28e-08!14;UBERON:0000170!7.28e-08!14;UBERON:0005597!7.28e-08!14;UBERON:0000118!7.28e-08!14;UBERON:0003886!1.56e-07!38;UBERON:0007100!3.29e-07!18;UBERON:0000948!3.29e-07!18;UBERON:0005498!3.29e-07!18;UBERON:0004140!3.29e-07!18;UBERON:0009881!3.29e-07!18;UBERON:0004141!3.29e-07!18;UBERON:0003084!3.29e-07!18;UBERON:0007005!3.29e-07!18;UBERON:0004139!3.29e-07!18;UBERON:0004291!3.29e-07!18;UBERON:0002323!4.71e-07!37;UBERON:0004458!4.71e-07!37;UBERON:0002553!6.64e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.23e-13,79;UBERON:0002100,3.81e-12,90;UBERON:0005178,2.52e-10,17;UBERON:0005181,2.52e-10,17;UBERON:0002224,2.52e-10,17;UBERON:0000915,2.52e-10,17;UBERON:0008947,2.52e-10,17;UBERON:0003258,2.52e-10,17;UBERON:0009569,3.83e-09,66;UBERON:0003103,2.62e-08,43;UBERON:0002048,3.42e-08,14;UBERON:0000117,3.42e-08,14;UBERON:0000171,3.42e-08,14;UBERON:0000170,3.42e-08,14;UBERON:0005597,3.42e-08,14;UBERON:0000118,3.42e-08,14;UBERON:0007100,1.67e-07,18;UBERON:0000948,1.67e-07,18;UBERON:0005498,1.67e-07,18;UBERON:0004140,1.67e-07,18;UBERON:0009881,1.67e-07,18;UBERON:0004141,1.67e-07,18;UBERON:0003084,1.67e-07,18;UBERON:0007005,1.67e-07,18;UBERON:0004139,1.67e-07,18;UBERON:0004291,1.67e-07,18;UBERON:0003886,2.10e-07,38;UBERON:0002323,6.53e-07,37;UBERON:0004458,6.53e-07,37;UBERON:0002553,7.16e-07,39;UBERON:0005153,7.69e-07,17
|phase1_expression=0.640595388419176,5.58360652222978,5.0049916332849,0,2.00358291978539,0,0.233612640595526,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,4.33720779770456,2.08510997521859,0,0.159992422793407,0.22940928106717,2.8711598205751,1.29228598847722,1.29282739611533,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.58328969722285,0.839918529752175,0,0,0,0,1.28629718017973,63.8969571063427,382.628692469862,0,0,0,0,1.77858959222228,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,1.12552522006336,1.22238598221448,0,0.142371680799103,0,0,0.0755715601067855,3.18850937571846,2.58127163094416,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,114.09077861291,96.0233890150624,102.115937892986,4.68153906848146,0,3.41416919849097,5.72501578328248,10.0473607843007,12.9144678463393,5.72746034099966,14.1106448562846,3.01599819191221,67.9786161269528,42.0784128636943,1.76922110389975,0.808834249737046,0,0,3.72783522436244,0,0.209446706813455,3.32094171771169,2.27648736561249,1.19980546198682,1.27070227073065,0.299581278809645,1.37250180845588,0,1.56441888173049,0.511430914660661,0,0.486723789203273,47.660822281948,9.82815067819735,52.3136109957707,35.7751155007006,0.650602214813519,2.5289231487682,12.0641626969584,13.2620239695429,17.9616357759506,14.3487366719032,6.65282244374075,42.6860561719376,4.74249584452253,4.34943984385984,9.14945845652534,12.9325482132269,78.4093242816186,13.5818344943645,1.02891068203972,15.1266042782055,0,0,0.284163499395593,31.8973689704673,22.9835538781474,17.4660199617184,14.4414288706978,10.6252685143598,23.4486011588815,19.0677834695334,16.0964040839772,17.6315666974426,13.8230273927324,11.3275550214576,9.48505071686512,9.0643992203706,22.6136618749782,20.1309628140558,2.73376933133365,0.205809224758569,0,1.58670339998127,22.82184280727,26.2427439202296,15.3352278973291,9.4791256572971,8.2279876222602,10.4624094361908,4.2707615539006,11.3642278759568,8.79673230800943,11.7384318504279,6.62877896205008,3.59527763461689,3.6743468478698,2.78797782556114,1.51734320762465,2.62771579002376,5.63538678365402,22.4016460629846,25.7956807932942,26.3009324588695,8.91635173452028,13.8753539100826,7.84993639206874,7.77402132707343,0.889357881261447,3.50374722003798,2.94838492669805,2.24862112384854,2.23146133527353,2.894125917029,4.07401362850272,6.04161888646702,4.05338066937588,4.11842119782122,2.87536413054709,7.07067800570156,9.67316786655138,1.76805214562978,4.30553792452589,1.4473305640901,57.4582421418141,14.5908387063273,8.31121379854332,10.0149600607361,12.2038929110021,16.4156132292979,38.0869825417622,50.7347484430277,51.3890569786183,62.6745071706033,57.5631714853528,81.7677940431533,71.6642674743467,109.210039229041,0,0,0,0,0.963303539926752,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.28528526568723,34.0656204499845,39.5305640141307,61.2454967169446,16.6619824202261,13.2745138339963,9.95400608235424,8.46505959501303,9.6188590675508,14.7650946440386,14.1420168054207,28.9439688348408,14.9048829085777,14.6163925137736,15.1697643809192,9.48767477174989,18.5643977846736,0,0.18006109403131,0.388076051348264,1.71469628025274,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,1.87737366450968,7.62595455109753,70.1280305814779,1.31909002353184,1.93757312035087,1.08563264870681,1.67121281604391,2.29797259643086,6.12109756922687,0.18542530201051,1.70870880797853,30.1324827226305,19.4454253738197,1.69531611304222,2.1871076435364,1.83022538565218,0.169978429993855,0,0.276399947608848,1.90934123603023,9.64824780422463,17.6887936400358,52.0585742761082,48.2993963793423,47.1663137691744,55.4292463641613,32.482808100057,10.4702376793612,2.85152941241944,0,0,12.5593898676942,7.61109056102649,8.36140109879405,9.04118764344118,7.43406952159424,7.98029222791127,5.33837977860195,2.09718688851422,0.966336483304024,0.864090018773596,2.21207784439725,1.82452693761148,1.64337531463724,2.33857481360031,2.68540043501222,2.78153896693771,0.480781798079875,0.738447635872886,3.23092639834072,0.15241361331,0.504130925684203,0.682205165178267,0.288635524920988,1.5193997283604,0,0,0,0,1227.9130596686,16.516057839704,8.60812634056146,12.0046292284277,46.6462056752888,0.564751842617067,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,1.24544817101012,3.59122386060928,3.92687293234509,43.7592090722929,11.528723944539,4.41224420280034,11.1123363900808,12.7741735488114,9.62757628775446,7.83361356467772,12.673964994512,10.3744487762342,10.0196412992774,8.89949618427683,8.78762675020883,11.4310485907938,9.03897742369873,8.48800570040302,8.24171801606613,11.0399190100798,10.9718160763333,9.22874192028555,8.10683045820891,11.482366913954,10.257922465271,10.9152844180263,9.3293266165114,11.8381370147029,10.4569167661314,10.1005608898393,7.47400614182297,8.66839444904958,6.95692773388472,10.3807683594597,12.7318363247553,11.2414760072076,15.2055545489515,22.7763317291196,3.63447830930802,1.32354851471709,2.08681052058379
|phase1_expression=0.640595388419176,5.58360652222978,5.0049916332849,0,2.00358291978539,0,0.233612640595526,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,4.33720779770456,2.08510997521859,0,0.159992422793407,0.22940928106717,2.8711598205751,1.29228598847722,1.29282739611533,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.58328969722285,0.839918529752175,0,0,0,0,1.28629718017973,63.8969571063427,382.628692469862,0,0,0,0,1.77858959222228,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.856952953211411,0.662605622854841,0,0,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,1.12552522006336,1.22238598221448,0,0.142371680799103,0,0,0.0755715601067855,3.18850937571846,2.58127163094416,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,114.09077861291,96.0233890150624,102.115937892986,4.68153906848146,0,3.41416919849097,5.72501578328248,10.0473607843007,12.9144678463393,5.72746034099966,14.1106448562846,3.01599819191221,67.9786161269528,42.0784128636943,1.76922110389975,0.808834249737046,0,0,3.72783522436244,0,0.209446706813455,3.32094171771169,2.27648736561249,1.19980546198682,1.27070227073065,0.299581278809645,1.37250180845588,0,1.56441888173049,0.511430914660661,0,0.486723789203273,47.660822281948,9.82815067819735,52.3136109957707,35.7751155007006,0.650602214813519,2.5289231487682,12.0641626969584,13.2620239695429,17.9616357759506,14.3487366719032,6.65282244374075,42.6860561719376,4.74249584452253,4.34943984385984,9.14945845652534,12.9325482132269,78.4093242816186,13.5818344943645,1.02891068203972,15.1266042782055,0,0,0.284163499395593,31.8973689704673,22.9835538781474,17.4660199617184,14.4414288706978,10.6252685143598,23.4486011588815,19.0677834695334,16.0964040839772,17.6315666974426,13.8230273927324,11.3275550214576,9.48505071686512,9.0643992203706,22.6136618749782,20.1309628140558,2.73376933133365,0.205809224758569,0,1.58670339998127,22.82184280727,26.2427439202296,15.3352278973291,9.4791256572971,8.2279876222602,10.4624094361908,4.2707615539006,11.3642278759568,8.79673230800943,11.7384318504279,6.62877896205008,3.59527763461689,3.6743468478698,2.78797782556114,1.51734320762465,2.62771579002376,5.63538678365402,22.4016460629846,25.7956807932942,26.3009324588695,8.91635173452028,13.8753539100826,7.84993639206874,7.77402132707343,0.889357881261447,3.50374722003798,2.94838492669805,2.24862112384854,2.23146133527353,2.894125917029,4.07401362850272,6.04161888646702,4.05338066937588,4.11842119782122,2.87536413054709,7.07067800570156,9.67316786655138,1.76805214562978,4.30553792452589,1.4473305640901,57.4582421418141,14.5908387063273,8.31121379854332,10.0149600607361,12.2038929110021,16.4156132292979,38.0869825417622,50.7347484430277,51.3890569786183,62.6745071706033,57.5631714853528,81.7677940431533,71.6642674743467,109.210039229041,0,0,0,0,0.963303539926752,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.28528526568723,34.0656204499845,39.5305640141307,61.2454967169446,16.6619824202261,13.2745138339963,9.95400608235424,8.46505959501303,9.6188590675508,14.7650946440386,14.1420168054207,28.9439688348408,14.9048829085777,14.6163925137736,15.1697643809192,9.48767477174989,18.5643977846736,0,0.18006109403131,0.388076051348264,1.71469628025274,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,1.87737366450968,7.62595455109753,70.1280305814779,1.31909002353184,1.93757312035087,1.08563264870681,1.67121281604391,2.29797259643086,6.12109756922687,0.18542530201051,1.70870880797853,30.1324827226305,19.4454253738197,1.69531611304222,2.1871076435364,1.83022538565218,0.169978429993855,0,0.276399947608848,1.90934123603023,9.64824780422463,17.6887936400358,52.0585742761082,48.2993963793423,47.1663137691744,55.4292463641613,32.482808100057,10.4702376793612,2.85152941241944,0,0,12.5593898676942,7.61109056102649,8.36140109879405,9.04118764344118,7.43406952159424,7.98029222791127,5.33837977860195,2.09718688851422,0.966336483304024,0.864090018773596,2.21207784439725,1.82452693761148,1.64337531463724,2.33857481360031,2.68540043501222,2.78153896693771,0.480781798079875,0.738447635872886,3.23092639834072,0.15241361331,0.504130925684203,0.682205165178267,0.288635524920988,1.5193997283604,0,0,0,0,1227.9130596686,16.516057839704,8.60812634056146,12.0046292284277,46.6462056752888,0.564751842617067,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,1.24544817101012,3.59122386060928,3.92687293234509,43.7592090722929,11.528723944539,4.41224420280034,11.1123363900808,12.7741735488114,9.62757628775446,7.83361356467772,12.673964994512,10.3744487762342,10.0196412992774,8.89949618427683,8.78762675020883,11.4310485907938,9.03897742369873,8.48800570040302,8.24171801606613,11.0399190100798,10.9718160763333,9.22874192028555,8.10683045820891,11.482366913954,10.257922465271,10.9152844180263,9.3293266165114,11.8381370147029,10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|short_description=p1@Upk1b
}}
}}

Latest revision as of 00:12, 2 October 2015

Short description:p1@Upk1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Upk1b_5end
Coexpression cluster:MCL_coexpression_mm9:95
Association with transcript: 0bp_to_ENSMUST00000057767, NM_178924, uc007zfm.2_5end
EntrezGene:Upk1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Upk1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E163.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5382.63
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1114.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G296.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3102.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I112.91
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C114.11
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A867.98
aorta, adult.CNhs10498.46-23H142.08
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B252.31
eyeball, adult.CNhs10484.31-12G435.78
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C617.96
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A242.69
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E778.41
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E931.90
heart, embryo E12.CNhs11015.353-12F522.98
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C623.45
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G316.10
heart, neonate N00.CNhs11213.639-21E317.63
heart, neonate N03.CNhs11221.1349-25I213.82
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G19.49
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D322.61
heart, neonate N30.CNhs11202.1390-42D220.13
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D526.24
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I222.40
kidney, embryo E18.CNhs11001.1288-20C725.80
kidney, neonate N00.CNhs11214.646-21G726.30
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I113.88
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H17.77
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B157.46
lung, embryo E12.CNhs10522.354-16G214.59
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B612.20
lung, embryo E17.CNhs10605.480-44A616.42
lung, embryo E18.CNhs10583.1287-20I638.09
lung, neonate N00.CNhs11224.640-42C650.73
lung, neonate N06.CNhs11212.683-20E551.39
lung, neonate N07.CNhs11111.715-19A362.67
lung, neonate N10.CNhs11219.750-23E657.56
lung, neonate N20.CNhs11109.822-18A481.77
lung, neonate N25.CNhs11119.1359-25C771.66
lung, neonate N30.CNhs11133.1394-42H2109.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I734.07
ovary, embryo E18.CNhs11040.505-44H739.53
ovary, neonate N00.CNhs11217.1299-22I461.25
oviduct, adult pregnant day01.CNhs10500.988-6G616.66
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F49.95
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G928.94
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F870.13
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C130.13
spleen, embryo E18.CNhs11011.1271-21F219.45
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G817.69
stomach, embryo E16.CNhs11022.459-17D452.06
stomach, embryo E17.CNhs11006.1035-18D548.30
stomach, embryo E18.CNhs10999.1286-20C647.17
stomach, neonate N03.CNhs11193.1340-24B855.43
stomach, neonate N07.CNhs11210.718-18A932.48
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F512.56
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I59.04
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B77.98
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41227.91
uterus, adult pregnant day19.CNhs10497.590-15F516.52
uterus, adult.CNhs10509.92-27E58.61
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F846.65
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D243.76
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.38
whole body, embryo E17.5.CNhs10513.490-9F912.73
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C222.78
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element2.23e-1379
trunk3.81e-1290
thoracic cavity element2.52e-1017
thoracic segment organ2.52e-1017
thoracic cavity2.52e-1017
thoracic segment of trunk2.52e-1017
respiratory primordium2.52e-1017
endoderm of foregut2.52e-1017
subdivision of trunk3.83e-0966
compound organ2.62e-0843
lung3.42e-0814
respiratory tube3.42e-0814
respiration organ3.42e-0814
pair of lungs3.42e-0814
lung primordium3.42e-0814
lung bud3.42e-0814
primary circulatory organ1.67e-0718
heart1.67e-0718
primitive heart tube1.67e-0718
primary heart field1.67e-0718
anterior lateral plate mesoderm1.67e-0718
heart tube1.67e-0718
heart primordium1.67e-0718
cardiac mesoderm1.67e-0718
cardiogenic plate1.67e-0718
heart rudiment1.67e-0718
body cavity precursor2.10e-0738
body cavity6.53e-0737
body cavity or lining6.53e-0737
anatomical cavity7.16e-0739
epithelial bud7.69e-0717
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