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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005206
|accession_numbers=CAGE;DRX007873;DRR008745;DRZ000170;DRZ001555;DRZ011520;DRZ012905
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr3:12330560..12330579,+!p1@PPARG!1.79!69.51!PPARG;;chr6:126240442..126240459,+!p4@NCOA7!1.64!53.29!NCOA7;;chr6:126240380..126240430,+!p2@NCOA7!1.62!101.28!NCOA7;;chr6:126240463..126240489,+!p6@NCOA7!1.56!39.39!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.46!45.35!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!1.45!122.47!HMGA2;;chr20:55204351..55204377,+!p1@TFAP2C!1.39!29.79!TFAP2C;;chr15:67418119..67418162,+!p5@SMAD3!1.32!21.85!SMAD3;;chr2:172967621..172967637,-!p1@DLX2!1.22!41.37!DLX2;;chr6:10412392..10412409,-!p4@TFAP2A!1.22!17.87!TFAP2A;;chr7:26191809..26191890,+!p1@NFE2L3!1.21!74.80!NFE2L3;;chr14:61116183..61116208,-!p1@SIX1!1.21!57.26!SIX1;;chr15:67418177..67418204,+!p9@SMAD3!1.19!14.56!SMAD3;;chr6:10415484..10415508,-!p3@TFAP2A!1.17!13.90!TFAP2A;;chr1:25256756..25256774,-!p1@RUNX3!1.16!25.16!RUNX3;;chr12:66218836..66218888,+!p1@HMGA2!1.14!119.49!HMGA2;;chr12:27485785..27485816,+!p1@ARNTL2!1.14!89.04!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!1.10!45.01!FOSL1;;chr17:70117153..70117174,+!p1@SOX9!1.09!116.51!SOX9;;chr6:10415276..10415341,-!p2@TFAP2A!1.09!13.90!TFAP2A;;chr2:172950227..172950249,+!p2@DLX1!1.08!10.92!DLX1;;chr12:66218378..66218401,+!p6@HMGA2!1.06!16.22!HMGA2;;chr21:38071430..38071456,+!p1@SIM2!1.06!10.59!SIM2;;chr2:172967242..172967265,-!p2@DLX2!1.06!10.59!DLX2;;chr15:67418047..67418093,+!p4@SMAD3!1.05!12.91!SMAD3;;chr12:66218573..66218596,+!p7@HMGA2!1.04!14.89!HMGA2;;chr7:27153454..27153469,-!p2@HOXA3!1.04!9.93!HOXA3;;chr12:27485823..27485868,+!p2@ARNTL2!1.02!39.39!ARNTL2;;chr12:54447599..54447630,+!p3@HOXC4!1.02!11.58!HOXC4;;chr3:141868357..141868393,-!p3@TFDP2!0.99!59.25!TFDP2;;chr6:126240356..126240379,+!p7@NCOA7!0.99!10.92!NCOA7;;chr12:27485762..27485776,+!p3@ARNTL2!0.98!23.50!ARNTL2;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.50!HMGA2;;chr10:8096772..8096787,+!p2@GATA3!0.98!10.26!GATA3;;chr2:172967323..172967336,-!p4@DLX2!0.97!8.27!DLX2;;chr15:67418099..67418118,+!p16@SMAD3!0.95!7.94!SMAD3;;chr6:34204921..34204939,+!p3@HMGA1!0.94!241.96!HMGA1;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.61!HOXB6;;chr11:65667846..65667868,-!p1@FOSL1!0.93!207.86!FOSL1;;chr12:66218003..66218018,+!p9@HMGA2!0.92!8.94!HMGA2;;chr17:46806067..46806097,-!p1@HOXB13!0.92!7.28!HOXB13;;chr17:41623692..41623715,-!p1@ETV4!0.91!31.78!ETV4;;chr2:45168997..45169020,+!p4@SIX3!0.90!6.95!SIX3;;chr21:38071403..38071428,+!p2@SIM2!0.90!6.95!SIM2;;chr9:110252035..110252057,-!p1@KLF4!0.89!113.86!KLF4;;chr2:172967276..172967296,-!p3@DLX2!0.88!6.62!DLX2;;chr12:19592405..19592492,+!p2@AEBP2!0.87!57.92!AEBP2;;chr20:42543441..42543497,+!p1@TOX2!0.87!30.45!TOX2;;chr17:46688334..46688385,-!p1@HOXB7!0.87!9.60!HOXB7;;chr16:86600426..86600441,+!p1@FOXC2!0.86!16.22!FOXC2;;chr2:172967353..172967365,-!p5@DLX2!0.86!6.29!DLX2;;chr12:54402745..54402788,+!p1@HOXC8!0.86!6.29!HOXC8;;chr6:34204672..34204692,+!p1@HMGA1!0.84!711.63!HMGA1;;chr9:114287433..114287513,+!p1@ZNF483!0.84!16.22!ZNF483;;chr2:45168834..45168847,+!p2@SIX3!0.82!5.63!SIX3;;chr17:46703942..46703964,-!p4@HOXB9!0.82!5.63!HOXB9;;chr5:321810..321877,+!p1@AHRR!0.81!18.54!AHRR;;chr12:66218152..66218174,+!p10@HMGA2!0.81!5.96!HMGA2;;chr1:120190786..120190915,-!p1@ZNF697!0.80!41.70!ZNF697;;chr5:72744445..72744466,-!p2@FOXD1!0.80!9.27!FOXD1;;chr5:174151612..174151633,+!p2@MSX2!0.80!5.30!MSX2;;chr13:100634031..100634045,+!p1@ZIC2!0.80!5.30!ZIC2;;chr17:46690839..46690884,-!p1@HOXB8!0.80!5.30!HOXB8;;chr11:61520075..61520136,+!p1@C11orf9!0.78!11.25!C11orf9;;chr12:66218420..66218439,+!p12@HMGA2!0.78!4.96!HMGA2;;chr6:10412477..10412490,-!p10@TFAP2A!0.78!4.96!TFAP2A;;chr6:126240490..126240501,+!p11@NCOA7!0.78!4.96!NCOA7;;chr7:96634850..96634874,+!p3@DLX6!0.78!4.96!DLX6;;chr2:176969228..176969260,+!p1@HOXD11!0.78!4.96!HOXD11;;chr15:67357924..67357952,+!p2@SMAD3!0.77!35.75!SMAD3;;chr5:72744594..72744609,-!p1@FOXD1!0.76!23.83!FOXD1;;chr17:41623009..41623053,-!p4@ETV4!0.75!7.94!ETV4;;chr2:200322654..200322707,-!p2@SATB2!0.75!6.95!SATB2;;chr12:66218212..66218244,+!p5@HMGA2!0.75!6.95!HMGA2;;chr13:79177703..79177729,-!p2@POU4F1!0.75!4.63!POU4F1;;chr6:10412576..10412599,-!p5@TFAP2A!0.75!4.63!TFAP2A;;chr17:8027418..8027432,-!p1@HES7!0.75!4.63!HES7;;chr5:174151553..174151610,+!p1@MSX2!0.74!7.94!MSX2;;chr2:200323414..200323455,-!p1@SATB2!0.73!9.93!SATB2;;chr12:66218183..66218209,+!p4@HMGA2!0.73!8.94!HMGA2;;chr10:8096631..8096660,+!p1@GATA3!0.72!5.30!GATA3;;chr13:28543285..28543314,-!p2@CDX2!0.72!4.30!CDX2;;chr16:86612320..86612394,+!p1@FOXL1!0.72!4.30!FOXL1;;chr17:46806098..46806118,-!p3@HOXB13!0.72!4.30!HOXB13;;chr10:104155480..104155534,+!p2@NFKB2!0.71!29.79!NFKB2;;chr2:157189180..157189290,-!p1@NR4A2!0.71!23.83!NR4A2;;chr6:126102254..126102289,+!p5@NCOA7!0.71!12.58!NCOA7;;chr9:110250697..110250738,-!p2@KLF4!0.71!4.96!KLF4;;chr2:101436564..101436647,+!p1@NPAS2!0.70!93.34!NPAS2;;chr11:65687362..65687436,+!p3@DRAP1!0.70!20.52!DRAP1;;chr12:66218443..66218461,+!p8@HMGA2!0.70!5.30!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.70!3.97!HMGA2;;chr16:86600870..86600921,+!p2@FOXC2!0.70!3.97!FOXC2;;chr6:126240542..126240553,+!p14@NCOA7!0.70!3.97!NCOA7;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.70!3.97!EN2;;chr8:10588010..10588030,-!p1@SOX7!0.70!3.97!SOX7;;chr20:55205825..55205847,+!p2@TFAP2C!0.70!3.97!TFAP2C;;chr15:96874244..96874259,+!p5@NR2F2!0.69!10.26!NR2F2;;chr15:67358163..67358192,+!p1@SMAD3!0.68!101.95!SMAD3;;chr12:124873357..124873401,-!p1@NCOR2!0.67!48.99!NCOR2;;chr11:65686732..65686756,+!p2@DRAP1!0.67!17.54!DRAP1;;chr1:935398..935465,-!p2@HES4!0.67!8.27!HES4;;chr6:85473156..85473210,-!p2@TBX18!0.67!4.63!TBX18;;chr14:61116168..61116180,-!p2@SIX1!0.67!4.30!SIX1;;chr3:157823517..157823562,-!p1@SHOX2!0.67!3.97!SHOX2;;chr22:19748231..19748317,+!p1@TBX1!0.67!3.64!TBX1;;chr12:54393880..54393962,+!p1@HOXC9!0.67!3.64!HOXC9;;chr13:100634130..100634143,+!p3@ZIC2!0.67!3.64!ZIC2;;chr13:45009301..45009320,-!p7@TSC22D1!0.67!3.64!TSC22D1;;chr6:34210478..34210481,+!p8@HMGA1!0.67!3.64!HMGA1;;chr8:11561684..11561751,+!p1@GATA4!0.67!3.64!GATA4;;chr9:115819058..115819082,-!p2@ZFP37!0.67!3.64!ZFP37;;chr13:45010939..45011033,-!p1@TSC22D1!0.66!272.74!TSC22D1;;chr5:178157651..178157689,-!p1@ZNF354A!0.66!16.88!ZNF354A;;chr6:126102292..126102329,+!p3@NCOA7!0.66!13.24!NCOA7;;chr20:62680984..62680999,-!p1@SOX18!0.66!4.96!SOX18;;chr17:46126136..46126152,+!p1@NFE2L1!0.65!207.86!NFE2L1;;chr2:10183651..10183713,+!p1@KLF11!0.65!29.13!KLF11;;chr18:19749541..19749557,+!p1@GATA6!0.65!12.25!GATA6;;chr8:86089417..86089440,+!p2@E2F5!0.65!7.61!E2F5;;chr17:79885633..79885645,-!p4@MAFG!0.65!6.29!MAFG;;chr12:125002827..125002855,-!p5@NCOR2!0.65!5.30!NCOR2;;chr2:178257401..178257432,-!p4@NFE2L2!0.64!22.18!NFE2L2;;chr11:65686802..65686818,+!p6@DRAP1!0.64!6.29!DRAP1;;chr14:74226961..74227020,-!p1@C14orf43!0.63!25.16!C14orf43;;chr11:128392273..128392308,-!p2@ETS1!0.63!16.22!ETS1;;chr21:30671690..30671762,+!p2@BACH1!0.63!12.91!BACH1;;chrX:101186981..101187030,-!p1@ZMAT1!0.63!12.25!ZMAT1;;chr9:16705069..16705086,-!p3@BNC2!0.63!3.31!BNC2;;chr9:129376201..129376225,+!p1@LMX1B!0.63!3.31!LMX1B;;chr11:65668011..65668020,-!p3@FOSL1!0.63!3.31!FOSL1;;chr12:54447219..54447237,+!p6@HOXC4!0.63!3.31!HOXC4;;chr12:66358080..66358094,+!p15@HMGA2!0.63!3.31!HMGA2;;chr9:124976185..124976212,-!p4@LHX6!0.63!3.31!LHX6;;chr5:180288248..180288291,-!p1@ZFP62!0.62!22.84!ZFP62;;chr4:4291861..4291913,-!p1@LYAR!0.61!86.06!LYAR;;chr3:12329397..12329433,+!p2@PPARG!0.61!7.94!PPARG;;chr9:110251836..110251887,-!p4@KLF4!0.61!4.30!KLF4;;chr14:35873947..35873965,-!p1@NFKBIA!0.60!231.03!NFKBIA;;chr11:128392085..128392232,-!p1@ETS1!0.60!120.81!ETS1;;chr9:115818951..115819011,-!p1@ZFP37!0.60!10.59!ZFP37;;chr1:212873267..212873332,-!p1@BATF3!0.60!4.30!BATF3;;chr2:100721328..100721348,-!p4@AFF3!0.60!2.98!AFF3;;chr3:25470156..25470227,+!p2@RARB!0.60!2.98!RARB;;chr7:27190547..27190591,-!p1@HOXA6!0.60!2.98!HOXA6;;chr12:54447637..54447659,+!p4@HOXC4!0.60!2.98!HOXC4;;chr12:66218469..66218477,+!p16@HMGA2!0.60!2.98!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!0.60!2.98!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.59!29.13!TBX3;;chr1:153939955..153940009,+!p2@CREB3L4!0.59!7.61!CREB3L4;;chr14:35872962..35873025,-!p3@NFKBIA!0.58!8.27!NFKBIA;;chr1:43148625..43148710,+!p3@YBX1!0.58!5.63!YBX1;;chr3:193853927..193853944,+!p1@HES1!0.57!109.56!HES1;;chr3:185826855..185826911,-!p1@ETV5!0.57!92.02!ETV5;;chr19:38146320..38146401,-!p1@ZFP30!0.57!18.20!ZFP30;;chr8:128749984..128750033,+!p4@MYC!0.57!11.58!MYC;;chr20:30193083..30193098,+!p1@ID1!0.56!267.11!ID1;;chr4:1873011..1873063,+!p2@WHSC1!0.56!10.59!WHSC1;;chr8:67525443..67525459,-!p2@MYBL1!0.56!4.30!MYBL1;;chr14:35872926..35872951,-!p4@NFKBIA!0.56!3.97!NFKBIA;;chr12:115122005..115122016,-!p3@TBX3!0.56!3.31!TBX3;;chr12:85673977..85674015,+!p1@ALX1!0.56!2.65!ALX1;;chr13:100634004..100634025,+!p2@ZIC2!0.56!2.65!ZIC2;;chr9:124976154..124976177,-!p5@LHX6!0.56!2.65!LHX6;;chrX:103499602..103499617,-!p1@ESX1!0.56!2.65!ESX1;;chr17:46691732..46691766,-!p4@HOXB8!0.56!2.65!HOXB8;;chr17:46703687..46703740,-!p1@HOXB9!0.56!2.65!HOXB9;;chr15:96874012..96874042,+!p2@NR2F2!0.55!28.47!NR2F2;;chr8:144329092..144329140,+!p1@ZFP41!0.55!22.51!ZFP41;;chr22:38597987..38598021,+!p2@MAFF!0.55!19.20!MAFF;;chr7:17338324..17338341,+!p3@AHR!0.55!10.26!AHR;;chr16:1429627..1429662,-!p2@UNKL!0.55!8.94!UNKL;;chr15:67358111..67358122,+!p6@SMAD3!0.55!4.96!SMAD3;;chr5:72744562..72744573,-!p3@FOXD1!0.55!3.31!FOXD1;;chr10:35484053..35484076,+!p1@CREM!0.54!7.28!CREM;;chr12:125002861..125002894,-!p7@NCOR2!0.54!3.97!NCOR2;;chr3:141087339..141087387,+!p2@ZBTB38!0.53!31.11!ZBTB38;;chr16:30537839..30537929,-!p1@ZNF768!0.53!18.87!ZNF768;;chr8:144373550..144373617,+!p1@ZNF696!0.53!10.59!ZNF696;;chr3:12329358..12329393,+!p3@PPARG!0.53!6.95!PPARG;;chr11:8102749..8102769,+!p2@TUB!0.53!5.30!TUB;;chr1:40367530..40367597,-!p1@MYCL1!0.53!4.96!MYCL1;;chr1:120190761..120190782,-!p2@ZNF697!0.53!3.64!ZNF697;;chr17:46687959..46688007,-!p2@HOXB7!0.53!3.64!HOXB7;;chr10:48355030..48355090,+!p1@ZNF488!0.53!3.31!ZNF488;;chr7:86781916..86781963,+!p2@DMTF1!0.52!12.58!DMTF1;;chr22:2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|expression_enrichment_score=chr3:12330560..12330579,+!p1@PPARG!1.79!69.51!PPARG;;chr6:126240442..126240459,+!p4@NCOA7!1.64!53.29!NCOA7;;chr6:126240380..126240430,+!p2@NCOA7!1.62!101.28!NCOA7;;chr6:126240463..126240489,+!p6@NCOA7!1.56!39.39!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.46!45.35!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!1.45!122.47!HMGA2;;chr20:55204351..55204377,+!p1@TFAP2C!1.39!29.79!TFAP2C;;chr15:67418119..67418162,+!p5@SMAD3!1.32!21.85!SMAD3;;chr2:172967621..172967637,-!p1@DLX2!1.22!41.37!DLX2;;chr6:10412392..10412409,-!p4@TFAP2A!1.22!17.87!TFAP2A;;chr7:26191809..26191890,+!p1@NFE2L3!1.21!74.80!NFE2L3;;chr14:61116183..61116208,-!p1@SIX1!1.21!57.26!SIX1;;chr15:67418177..67418204,+!p9@SMAD3!1.19!14.56!SMAD3;;chr6:10415484..10415508,-!p3@TFAP2A!1.17!13.90!TFAP2A;;chr1:25256756..25256774,-!p1@RUNX3!1.16!25.16!RUNX3;;chr12:66218836..66218888,+!p1@HMGA2!1.14!119.49!HMGA2;;chr12:27485785..27485816,+!p1@ARNTL2!1.14!89.04!ARNTL2;;chr11:65667884..65667895,-!p2@FOSL1!1.10!45.01!FOSL1;;chr17:70117153..70117174,+!p1@SOX9!1.09!116.51!SOX9;;chr6:10415276..10415341,-!p2@TFAP2A!1.09!13.90!TFAP2A;;chr2:172950227..172950249,+!p2@DLX1!1.08!10.92!DLX1;;chr12:66218378..66218401,+!p6@HMGA2!1.06!16.22!HMGA2;;chr21:38071430..38071456,+!p1@SIM2!1.06!10.59!SIM2;;chr2:172967242..172967265,-!p2@DLX2!1.06!10.59!DLX2;;chr15:67418047..67418093,+!p4@SMAD3!1.05!12.91!SMAD3;;chr12:66218573..66218596,+!p7@HMGA2!1.04!14.89!HMGA2;;chr7:27153454..27153469,-!p2@HOXA3!1.04!9.93!HOXA3;;chr12:27485823..27485868,+!p2@ARNTL2!1.02!39.39!ARNTL2;;chr12:54447599..54447630,+!p3@HOXC4!1.02!11.58!HOXC4;;chr3:141868357..141868393,-!p3@TFDP2!0.99!59.25!TFDP2;;chr6:126240356..126240379,+!p7@NCOA7!0.99!10.92!NCOA7;;chr12:27485762..27485776,+!p3@ARNTL2!0.98!23.50!ARNTL2;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.50!HMGA2;;chr10:8096772..8096787,+!p2@GATA3!0.98!10.26!GATA3;;chr2:172967323..172967336,-!p4@DLX2!0.97!8.27!DLX2;;chr15:67418099..67418118,+!p16@SMAD3!0.95!7.94!SMAD3;;chr6:34204921..34204939,+!p3@HMGA1!0.94!241.96!HMGA1;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.61!HOXB6;;chr11:65667846..65667868,-!p1@FOSL1!0.93!207.86!FOSL1;;chr12:66218003..66218018,+!p9@HMGA2!0.92!8.94!HMGA2;;chr17:46806067..46806097,-!p1@HOXB13!0.92!7.28!HOXB13;;chr17:41623692..41623715,-!p1@ETV4!0.91!31.78!ETV4;;chr2:45168997..45169020,+!p4@SIX3!0.90!6.95!SIX3;;chr21:38071403..38071428,+!p2@SIM2!0.90!6.95!SIM2;;chr9:110252035..110252057,-!p1@KLF4!0.89!113.86!KLF4;;chr2:172967276..172967296,-!p3@DLX2!0.88!6.62!DLX2;;chr12:19592405..19592492,+!p2@AEBP2!0.87!57.92!AEBP2;;chr20:42543441..42543497,+!p1@TOX2!0.87!30.45!TOX2;;chr17:46688334..46688385,-!p1@HOXB7!0.87!9.60!HOXB7;;chr16:86600426..86600441,+!p1@FOXC2!0.86!16.22!FOXC2;;chr2:172967353..172967365,-!p5@DLX2!0.86!6.29!DLX2;;chr12:54402745..54402788,+!p1@HOXC8!0.86!6.29!HOXC8;;chr6:34204672..34204692,+!p1@HMGA1!0.84!711.63!HMGA1;;chr9:114287433..114287513,+!p1@ZNF483!0.84!16.22!ZNF483;;chr2:45168834..45168847,+!p2@SIX3!0.82!5.63!SIX3;;chr17:46703942..46703964,-!p4@HOXB9!0.82!5.63!HOXB9;;chr5:321810..321877,+!p1@AHRR!0.81!18.54!AHRR;;chr12:66218152..66218174,+!p10@HMGA2!0.81!5.96!HMGA2;;chr1:120190786..120190915,-!p1@ZNF697!0.80!41.70!ZNF697;;chr5:72744445..72744466,-!p2@FOXD1!0.80!9.27!FOXD1;;chr5:174151612..174151633,+!p2@MSX2!0.80!5.30!MSX2;;chr13:100634031..100634045,+!p1@ZIC2!0.80!5.30!ZIC2;;chr17:46690839..46690884,-!p1@HOXB8!0.80!5.30!HOXB8;;chr11:61520075..61520136,+!p1@C11orf9!0.78!11.25!C11orf9;;chr12:66218420..66218439,+!p12@HMGA2!0.78!4.96!HMGA2;;chr6:10412477..10412490,-!p10@TFAP2A!0.78!4.96!TFAP2A;;chr6:126240490..126240501,+!p11@NCOA7!0.78!4.96!NCOA7;;chr7:96634850..96634874,+!p3@DLX6!0.78!4.96!DLX6;;chr2:176969228..176969260,+!p1@HOXD11!0.78!4.96!HOXD11;;chr15:67357924..67357952,+!p2@SMAD3!0.77!35.75!SMAD3;;chr5:72744594..72744609,-!p1@FOXD1!0.76!23.83!FOXD1;;chr17:41623009..41623053,-!p4@ETV4!0.75!7.94!ETV4;;chr2:200322654..200322707,-!p2@SATB2!0.75!6.95!SATB2;;chr12:66218212..66218244,+!p5@HMGA2!0.75!6.95!HMGA2;;chr13:79177703..79177729,-!p2@POU4F1!0.75!4.63!POU4F1;;chr6:10412576..10412599,-!p5@TFAP2A!0.75!4.63!TFAP2A;;chr17:8027418..8027432,-!p1@HES7!0.75!4.63!HES7;;chr5:174151553..174151610,+!p1@MSX2!0.74!7.94!MSX2;;chr2:200323414..200323455,-!p1@SATB2!0.73!9.93!SATB2;;chr12:66218183..66218209,+!p4@HMGA2!0.73!8.94!HMGA2;;chr10:8096631..8096660,+!p1@GATA3!0.72!5.30!GATA3;;chr13:28543285..28543314,-!p2@CDX2!0.72!4.30!CDX2;;chr16:86612320..86612394,+!p1@FOXL1!0.72!4.30!FOXL1;;chr17:46806098..46806118,-!p3@HOXB13!0.72!4.30!HOXB13;;chr10:104155480..104155534,+!p2@NFKB2!0.71!29.79!NFKB2;;chr2:157189180..157189290,-!p1@NR4A2!0.71!23.83!NR4A2;;chr6:126102254..126102289,+!p5@NCOA7!0.71!12.58!NCOA7;;chr9:110250697..110250738,-!p2@KLF4!0.71!4.96!KLF4;;chr2:101436564..101436647,+!p1@NPAS2!0.70!93.34!NPAS2;;chr11:65687362..65687436,+!p3@DRAP1!0.70!20.52!DRAP1;;chr12:66218443..66218461,+!p8@HMGA2!0.70!5.30!HMGA2;;chr12:66218904..66218913,+!p11@HMGA2!0.70!3.97!HMGA2;;chr16:86600870..86600921,+!p2@FOXC2!0.7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Line 37: Line 40:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a1C3D3.CNhs11732.10605-108F2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a1C3D3.CNhs11732.10605-108F2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a1C3D3.CNhs11732.10605-108F2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a1C3D3.CNhs11732.10605-108F2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a1C3D3.CNhs11732.10605-108F2.hg38.nobarcode.ctss.bed.gz
|id=FF:10605-108F2
|id=FF:10605-108F2
|is_a=EFO:0002091;;FF:0000210;;FF:0100669;;UBERON:0001264
|is_a=EFO:0002091;;FF:0000210;;FF:0100669;;UBERON:0001264
|is_obsolete=
|is_obsolete=
|library_id=CNhs11732
|library_id_phase_based=2:CNhs11732
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10605
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10605
|name=embryonic pancreas cell line:1C3D3
|name=embryonic pancreas cell line:1C3D3
|namespace=FANTOM5
|namespace=FANTOM5
Line 45: Line 59:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11732,LSID819,release009,COMPLETED
|profile_hcage=CNhs11732,LSID819,release009,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
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Line 61: Line 77:
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|sample_age=19 week embryo
|sample_age=19 week embryo
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|sample_cell_line=1C3D3
Line 82: Line 99:
|top_motifs=FOXQ1:1.54459981527;PAX8:1.45506634335;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.40712202769;AIRE:1.39584197241;ONECUT1,2:1.39430490845;bHLH_family:1.15132533595;HES1:1.13289131545;POU1F1:0.857624543612;NKX2-2,8:0.836058067713;PAX1,9:0.726050056738;TEF:0.720153625458;ARID5B:0.651894750508;HOX{A6,A7,B6,B7}:0.586385682177;POU6F1:0.572940008774;PPARG:0.534872416862;ALX1:0.530781363729;FOX{I1,J2}:0.528420995239;RORA:0.514868136631;PITX1..3:0.489218646632;PAX3,7:0.417042051898;ZFP161:0.411535442984;ADNP_IRX_SIX_ZHX:0.394736961461;PAX4:0.386525479967;BPTF:0.384682651804;NRF1:0.369205735254;NFE2L2:0.35428982357;NFIX:0.340572167685;YY1:0.336493470761;GTF2A1,2:0.330833008024;CDC5L:0.329635033236;ZBTB16:0.301411830407;PRRX1,2:0.294205632352;ZNF143:0.292692884459;CEBPA,B_DDIT3:0.292409477593;FOS_FOS{B,L1}_JUN{B,D}:0.288716569718;PBX1:0.267429648775;MYB:0.257840993848;HOX{A4,D4}:0.257075821906;GLI1..3:0.25400785985;AHR_ARNT_ARNT2:0.245349143505;VSX1,2:0.242684125564;ELK1,4_GABP{A,B1}:0.241424323439;NFE2:0.231185323417;EGR1..3:0.200929230991;RFX1:0.194916688362;HOX{A5,B5}:0.194013587564;HOXA9_MEIS1:0.156943351117;RXR{A,B,G}:0.156482404429;TLX1..3_NFIC{dimer}:0.144460263525;TEAD1:0.136454592241;TFAP2B:0.133678410199;TP53:0.130230452843;BACH2:0.129228466184;SP1:0.113755178471;STAT5{A,B}:0.111192680784;E2F1..5:0.110242824394;FOX{D1,D2}:0.100981643021;XCPE1{core}:0.0981840487818;NFKB1_REL_RELA:0.0963353133825;HIC1:0.0937883853746;REST:0.0790155482217;UFEwm:0.0529296163779;FOSL2:0.0525940819744;HNF1A:0.04990587913;FOXP1:0.0477942476161;NANOG:0.0427829998121;ZIC1..3:0.0421014107689;LMO2:0.0373867085264;ATF4:0.0174830990065;NR5A1,2:0.0122031718658;CDX1,2,4:0.0104189816852;CUX2:0.0086723965042;ZNF423:0.00651932021975;NR3C1:-0.0127869435271;LEF1_TCF7_TCF7L1,2:-0.0172069172034;TBX4,5:-0.0298671974877;ZBTB6:-0.0319600162821;NFE2L1:-0.0373430308586;FOXA2:-0.0520869194271;EVI1:-0.0646703671002;TFAP2{A,C}:-0.0744031666484;FOXD3:-0.0796641248663;FOX{F1,F2,J1}:-0.0812975679604;SOX17:-0.0862975941333;ZNF148:-0.0904256084697;TFDP1:-0.0936119402806;POU2F1..3:-0.1063544797;NKX2-1,4:-0.107377346893;RBPJ:-0.110338456192;ALX4:-0.112230021804;NKX6-1,2:-0.121762082241;POU3F1..4:-0.122248915868;TOPORS:-0.123247927809;CRX:-0.128532061447;SOX5:-0.134487639671;PAX5:-0.136436908081;PDX1:-0.13836938986;IKZF2:-0.141919569585;MYOD1:-0.146009418608;SNAI1..3:-0.146438111362;FOXM1:-0.151084352454;HNF4A_NR2F1,2:-0.15279030363;BREu{core}:-0.176915374991;NKX3-2:-0.177879634169;T:-0.180849047475;ATF2:-0.193210685171;ELF1,2,4:-0.193545683926;HLF:-0.201088975441;NR1H4:-0.212168199295;ZNF384:-0.213034944452;NFIL3:-0.217785364021;ZEB1:-0.220812623891;EBF1:-0.22158725574;HSF1,2:-0.22234133777;PATZ1:-0.224780918901;HBP1_HMGB_SSRP1_UBTF:-0.24532977899;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.246257715418;NKX3-1:-0.248798433752;ESRRA:-0.256232263163;RFX2..5_RFXANK_RFXAP:-0.264476469249;MEF2{A,B,C,D}:-0.265601712389;POU5F1:-0.267013504627;HMGA1,2:-0.269410808816;ETS1,2:-0.271630857149;GATA6:-0.275161770612;EN1,2:-0.275740751456;DMAP1_NCOR{1,2}_SMARC:-0.278777372446;MED-1{core}:-0.286735599366;PAX2:-0.290076458386;ESR1:-0.305066235078;IKZF1:-0.30541283067;RXRA_VDR{dimer}:-0.311447980474;SRF:-0.324887439239;SOX2:-0.327189082826;FOXL1:-0.333379901896;ATF5_CREB3:-0.334288826558;SPIB:-0.342788491863;STAT2,4,6:-0.349883344141;IRF7:-0.357647864256;PRDM1:-0.362083149515;MYBL2:-0.371321942241;SOX{8,9,10}:-0.376058850919;NFY{A,B,C}:-0.377565144882;LHX3,4:-0.388646024114;OCT4_SOX2{dimer}:-0.391868605251;GTF2I:-0.410030072814;GFI1B:-0.438230602045;CREB1:-0.438943599491;SPI1:-0.446697746173;TAL1_TCF{3,4,12}:-0.450857753416;GZF1:-0.464446488737;MTF1:-0.467946951193;NFATC1..3:-0.478778140226;NHLH1,2:-0.522992381909;RUNX1..3:-0.526777960393;TFCP2:-0.537902843151;NR6A1:-0.572872201101;MTE{core}:-0.574106801219;JUN:-0.616910927165;IRF1,2:-0.661901019854;FOXN1:-0.685264535692;MYFfamily:-0.686345350824;HIF1A:-0.712970017231;SMAD1..7,9:-0.725936832689;MAZ:-0.73290979899;FOXO1,3,4:-0.736263657814;XBP1:-0.741851091355;AR:-0.746837535132;KLF4:-0.751182650786;STAT1,3:-0.771451074684;RREB1:-0.77440655871;DBP:-0.787685124009;GATA4:-0.806995806043;GFI1:-0.815672618203;TLX2:-0.816563544526;PAX6:-0.830650929839;TFAP4:-0.835600056056;NKX2-3_NKX2-5:-0.838642874282;ATF6:-0.853656494345;SPZ1:-0.860626005595;HAND1,2:-0.868595442021;MZF1:-0.916868840853;TBP:-0.97031842527;FOXP3:-0.995282915884;SREBF1,2:-1.00698148826;GCM1,2:-1.06526298851;HMX1:-1.06982806663;EP300:-1.10182610362;MAFB:-1.15110898082;ZNF238:-1.26412345929;NANOG{mouse}:-1.32799405421;TGIF1:-1.39941397783
|top_motifs=FOXQ1:1.54459981527;PAX8:1.45506634335;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.40712202769;AIRE:1.39584197241;ONECUT1,2:1.39430490845;bHLH_family:1.15132533595;HES1:1.13289131545;POU1F1:0.857624543612;NKX2-2,8:0.836058067713;PAX1,9:0.726050056738;TEF:0.720153625458;ARID5B:0.651894750508;HOX{A6,A7,B6,B7}:0.586385682177;POU6F1:0.572940008774;PPARG:0.534872416862;ALX1:0.530781363729;FOX{I1,J2}:0.528420995239;RORA:0.514868136631;PITX1..3:0.489218646632;PAX3,7:0.417042051898;ZFP161:0.411535442984;ADNP_IRX_SIX_ZHX:0.394736961461;PAX4:0.386525479967;BPTF:0.384682651804;NRF1:0.369205735254;NFE2L2:0.35428982357;NFIX:0.340572167685;YY1:0.336493470761;GTF2A1,2:0.330833008024;CDC5L:0.329635033236;ZBTB16:0.301411830407;PRRX1,2:0.294205632352;ZNF143:0.292692884459;CEBPA,B_DDIT3:0.292409477593;FOS_FOS{B,L1}_JUN{B,D}:0.288716569718;PBX1:0.267429648775;MYB:0.257840993848;HOX{A4,D4}:0.257075821906;GLI1..3:0.25400785985;AHR_ARNT_ARNT2:0.245349143505;VSX1,2:0.242684125564;ELK1,4_GABP{A,B1}:0.241424323439;NFE2:0.231185323417;EGR1..3:0.200929230991;RFX1:0.194916688362;HOX{A5,B5}:0.194013587564;HOXA9_MEIS1:0.156943351117;RXR{A,B,G}:0.156482404429;TLX1..3_NFIC{dimer}:0.144460263525;TEAD1:0.136454592241;TFAP2B:0.133678410199;TP53:0.130230452843;BACH2:0.129228466184;SP1:0.113755178471;STAT5{A,B}:0.111192680784;E2F1..5:0.110242824394;FOX{D1,D2}:0.100981643021;XCPE1{core}:0.0981840487818;NFKB1_REL_RELA:0.0963353133825;HIC1:0.0937883853746;REST:0.0790155482217;UFEwm:0.0529296163779;FOSL2:0.0525940819744;HNF1A:0.04990587913;FOXP1:0.0477942476161;NANOG:0.0427829998121;ZIC1..3:0.0421014107689;LMO2:0.0373867085264;ATF4:0.0174830990065;NR5A1,2:0.0122031718658;CDX1,2,4:0.0104189816852;CUX2:0.0086723965042;ZNF423:0.00651932021975;NR3C1:-0.0127869435271;LEF1_TCF7_TCF7L1,2:-0.0172069172034;TBX4,5:-0.0298671974877;ZBTB6:-0.0319600162821;NFE2L1:-0.0373430308586;FOXA2:-0.0520869194271;EVI1:-0.0646703671002;TFAP2{A,C}:-0.0744031666484;FOXD3:-0.0796641248663;FOX{F1,F2,J1}:-0.0812975679604;SOX17:-0.0862975941333;ZNF148:-0.0904256084697;TFDP1:-0.0936119402806;POU2F1..3:-0.1063544797;NKX2-1,4:-0.107377346893;RBPJ:-0.110338456192;ALX4:-0.112230021804;NKX6-1,2:-0.121762082241;POU3F1..4:-0.122248915868;TOPORS:-0.123247927809;CRX:-0.128532061447;SOX5:-0.134487639671;PAX5:-0.136436908081;PDX1:-0.13836938986;IKZF2:-0.141919569585;MYOD1:-0.146009418608;SNAI1..3:-0.146438111362;FOXM1:-0.151084352454;HNF4A_NR2F1,2:-0.15279030363;BREu{core}:-0.176915374991;NKX3-2:-0.177879634169;T:-0.180849047475;ATF2:-0.193210685171;ELF1,2,4:-0.193545683926;HLF:-0.201088975441;NR1H4:-0.212168199295;ZNF384:-0.213034944452;NFIL3:-0.217785364021;ZEB1:-0.220812623891;EBF1:-0.22158725574;HSF1,2:-0.22234133777;PATZ1:-0.224780918901;HBP1_HMGB_SSRP1_UBTF:-0.24532977899;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.246257715418;NKX3-1:-0.248798433752;ESRRA:-0.256232263163;RFX2..5_RFXANK_RFXAP:-0.264476469249;MEF2{A,B,C,D}:-0.265601712389;POU5F1:-0.267013504627;HMGA1,2:-0.269410808816;ETS1,2:-0.271630857149;GATA6:-0.275161770612;EN1,2:-0.275740751456;DMAP1_NCOR{1,2}_SMARC:-0.278777372446;MED-1{core}:-0.286735599366;PAX2:-0.290076458386;ESR1:-0.305066235078;IKZF1:-0.30541283067;RXRA_VDR{dimer}:-0.311447980474;SRF:-0.324887439239;SOX2:-0.327189082826;FOXL1:-0.333379901896;ATF5_CREB3:-0.334288826558;SPIB:-0.342788491863;STAT2,4,6:-0.349883344141;IRF7:-0.357647864256;PRDM1:-0.362083149515;MYBL2:-0.371321942241;SOX{8,9,10}:-0.376058850919;NFY{A,B,C}:-0.377565144882;LHX3,4:-0.388646024114;OCT4_SOX2{dimer}:-0.391868605251;GTF2I:-0.410030072814;GFI1B:-0.438230602045;CREB1:-0.438943599491;SPI1:-0.446697746173;TAL1_TCF{3,4,12}:-0.450857753416;GZF1:-0.464446488737;MTF1:-0.467946951193;NFATC1..3:-0.478778140226;NHLH1,2:-0.522992381909;RUNX1..3:-0.526777960393;TFCP2:-0.537902843151;NR6A1:-0.572872201101;MTE{core}:-0.574106801219;JUN:-0.616910927165;IRF1,2:-0.661901019854;FOXN1:-0.685264535692;MYFfamily:-0.686345350824;HIF1A:-0.712970017231;SMAD1..7,9:-0.725936832689;MAZ:-0.73290979899;FOXO1,3,4:-0.736263657814;XBP1:-0.741851091355;AR:-0.746837535132;KLF4:-0.751182650786;STAT1,3:-0.771451074684;RREB1:-0.77440655871;DBP:-0.787685124009;GATA4:-0.806995806043;GFI1:-0.815672618203;TLX2:-0.816563544526;PAX6:-0.830650929839;TFAP4:-0.835600056056;NKX2-3_NKX2-5:-0.838642874282;ATF6:-0.853656494345;SPZ1:-0.860626005595;HAND1,2:-0.868595442021;MZF1:-0.916868840853;TBP:-0.97031842527;FOXP3:-0.995282915884;SREBF1,2:-1.00698148826;GCM1,2:-1.06526298851;HMX1:-1.06982806663;EP300:-1.10182610362;MAFB:-1.15110898082;ZNF238:-1.26412345929;NANOG{mouse}:-1.32799405421;TGIF1:-1.39941397783
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10605-108F2;search_select_hide=table117:FF:10605-108F2
}}
}}

Latest revision as of 14:30, 3 June 2020

Name:embryonic pancreas cell line:1C3D3
Species:Human (Homo sapiens)
Library ID:CNhs11732
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepancreas
dev stageNA
sexunknown
age19 week embryo
cell typeunclassifiable
cell line1C3D3
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005206
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11732 CAGE DRX007873 DRR008745
Accession ID Hg19

Library idBAMCTSS
CNhs11732 DRZ000170 DRZ001555
Accession ID Hg38

Library idBAMCTSS
CNhs11732 DRZ011520 DRZ012905
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0156
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.099
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0118
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.129
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0789
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0688
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.301
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.023
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.00609
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11732

Jaspar motifP-value
MA0002.20.519
MA0003.10.605
MA0004.10.0431
MA0006.10.919
MA0007.10.0993
MA0009.10.69
MA0014.10.25
MA0017.10.963
MA0018.20.111
MA0019.10.994
MA0024.10.934
MA0025.10.342
MA0027.10.635
MA0028.10.00944
MA0029.10.363
MA0030.10.0957
MA0031.10.589
MA0035.20.152
MA0038.10.185
MA0039.20.0132
MA0040.10.389
MA0041.10.501
MA0042.10.825
MA0043.10.137
MA0046.10.655
MA0047.20.153
MA0048.10.00643
MA0050.13.55894e-5
MA0051.10.504
MA0052.10.449
MA0055.13.9696e-5
MA0057.10.799
MA0058.10.203
MA0059.10.0385
MA0060.10.023
MA0061.10.31
MA0062.20.229
MA0065.20.0138
MA0066.10.964
MA0067.10.409
MA0068.10.0218
MA0069.10.824
MA0070.10.91
MA0071.10.153
MA0072.10.633
MA0073.10.696
MA0074.10.823
MA0076.10.14
MA0077.10.231
MA0078.10.56
MA0079.20.983
MA0080.21.414e-5
MA0081.10.196
MA0083.10.17
MA0084.10.749
MA0087.10.941
MA0088.10.044
MA0090.10.409
MA0091.10.0218
MA0092.10.0657
MA0093.10.041
MA0099.21.89421e-6
MA0100.10.987
MA0101.10.0199
MA0102.20.0395
MA0103.10.348
MA0104.20.00717
MA0105.10.944
MA0106.10.83
MA0107.10.128
MA0108.23.59254e-4
MA0111.10.385
MA0112.20.926
MA0113.10.433
MA0114.10.0378
MA0115.10.483
MA0116.10.451
MA0117.10.0647
MA0119.10.167
MA0122.10.367
MA0124.10.177
MA0125.10.558
MA0131.10.329
MA0135.10.0751
MA0136.10.00624
MA0137.20.125
MA0138.20.813
MA0139.10.0777
MA0140.10.0977
MA0141.10.129
MA0142.10.0538
MA0143.10.897
MA0144.10.559
MA0145.10.302
MA0146.10.519
MA0147.17.01999e-4
MA0148.10.0173
MA0149.10.0152
MA0150.10.583
MA0152.10.619
MA0153.10.48
MA0154.10.428
MA0155.10.394
MA0156.10.798
MA0157.10.672
MA0159.10.0515
MA0160.10.682
MA0162.10.746
MA0163.10.892
MA0164.10.203
MA0258.10.865
MA0259.10.0627



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11732

Novel motifP-value
10.579
100.292
1000.278
1010.891
1020.128
1030.121
1040.449
1050.891
1060.00278
1070.564
1080.869
1090.0174
110.547
1100.719
1110.114
1120.446
1130.0437
1140.646
1150.871
1160.845
1170.0779
1180.342
1190.0845
120.287
1200.163
1210.493
1220.948
1230.363
1240.237
1250.768
1260.667
1270.716
1280.0382
1290.219
130.114
1300.673
1310.105
1320.677
1330.109
1340.0438
1350.0191
1360.118
1370.334
1380.583
1390.542
140.715
1400.74
1410.829
1420.266
1430.458
1440.914
1450.136
1460.697
1470.054
1480.68
1490.11
150.0264
1500.978
1510.991
1520.817
1530.438
1540.506
1550.179
1560.598
1570.866
1580.129
1590.225
160.854
1600.831
1610.295
1620.802
1630.588
1640.611
1650.536
1660.324
1670.145
1680.985
1690.573
170.47
180.779
190.179
20.0436
200.00712
210.256
220.503
230.465
240.873
250.195
260.409
270.106
280.554
290.694
30.43
300.131
310.336
320.085
330.937
340.642
350.706
360.0852
370.642
380.497
390.846
40.988
400.0278
410.247
420.174
430.782
440.909
450.675
460.696
470.623
480.454
490.729
50.713
500.175
510.857
520.0316
530.341
540.909
550.448
560.416
570.251
580.518
590.143
60.536
600.0982
610.042
620.226
630.286
640.661
650.936
660.122
670.298
680.887
690.569
70.591
700.0593
710.85
720.104
730.618
740.472
750.199
760.0726
770.739
780.8
790.648
80.608
800.642
810.0985
820.504
830.572
840.791
850.834
860.437
870.103
880.822
890.0333
90.399
900.145
910.128
920.413
930.0195
940.631
950.147
960.272
970.761
980.371
990.229



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11732


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100669 (embryonic cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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